CB322103
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_MYCBP (1-deoxy-D-xylulose-5-phosphate synthase OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=dxs PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 4.208e-28 Identity = 70/196 (35.71%), Postives = 112/196 (57.14%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGS 585 LA G+ P AIYS+FL R +DQ++ DV L KLPV +DRAG+ G+DG +H G +D++ + +P + V AP D L + A +DD P+ RFP+G+ +G + + +++ V ++ G+ + A L +Q I VTV D R+ P+ +D +R+LA +H++L+T+E+ V GG GS Sbjct: 375 LAMGGLHPVVAIYSTFLNRAFDQIMMDVALHKLPVTMVLDRAGITGSDGASHNGMWDLSMLGIVPGIRVAAPRDATRLREELGEALDVDDGPTALRFPKGD-VGEDISALERRGGVDVLAAPADGLNHDVLLVAIGAFAPMALAVAKRLHNQGIGVTVIDPRWVLPV-SDGVRELAVQHKLLVTLEDNGVNGGAGS 568
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_MYCBO (1-deoxy-D-xylulose-5-phosphate synthase OS=Mycobacterium bovis GN=dxs PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 4.208e-28 Identity = 70/196 (35.71%), Postives = 112/196 (57.14%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGS 585 LA G+ P AIYS+FL R +DQ++ DV L KLPV +DRAG+ G+DG +H G +D++ + +P + V AP D L + A +DD P+ RFP+G+ +G + + +++ V ++ G+ + A L +Q I VTV D R+ P+ +D +R+LA +H++L+T+E+ V GG GS Sbjct: 375 LAMGGLHPVVAIYSTFLNRAFDQIMMDVALHKLPVTMVLDRAGITGSDGASHNGMWDLSMLGIVPGIRVAAPRDATRLREELGEALDVDDGPTALRFPKGD-VGEDISALERRGGVDVLAAPADGLNHDVLLVAIGAFAPMALAVAKRLHNQGIGVTVIDPRWVLPV-SDGVRELAVQHKLLVTLEDNGVNGGAGS 568
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS2_STRAW (1-deoxy-D-xylulose-5-phosphate synthase 2 OS=Streptomyces avermitilis GN=dxs2 PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 4.208e-28 Identity = 72/200 (36.00%), Postives = 113/200 (56.50%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILME----GDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGS-VGGFGS 585 LA+ G+ P A+Y++FL R +DQV+ DV L K V F +DRAG+ G DG +H G +D++ + +P + + AP D ++ + A +DD P+ RF +G +G +P + IG +L E V ++ G++ C+ A +L Q IS TV D R+ KP+D + + LA H +++TVE+ S VGG GS Sbjct: 376 LATGGLHPVFAVYATFLNRAFDQVLMDVALHKCGVTFVLDRAGVTGTDGASHNGMWDMSILQVVPGLRLAAPRDADQVRAQLREAVDVDDAPTVVRFSKG-AVGPAVPAVGR-----IGGMDVLREPGTDAPDVLLVSVGALAPMCLEIAGLLDKQGISATVVDPRWVKPVD-EAMAPLAERHRVVVTVEDNSRVGGVGS 568
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_NOCSJ (1-deoxy-D-xylulose-5-phosphate synthase OS=Nocardioides sp. (strain BAA-499 / JS614) GN=dxs PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 5.495e-28 Identity = 70/199 (35.18%), Postives = 112/199 (56.28%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDR--VAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEE-GSVGGFGSL 588 LA G+ P A+Y +FL R +DQV+ DV L K V F +DR+G+ G DG +H G +D++ + +P + + AP D A L ++ A +DD P+ RFP+G+ PP + G IL+ V ++ G++ V A L +Q I VTV D R+ KP+D ++ +LA EH +++++E+ G GG G++ Sbjct: 376 LAMGGMHPVVALYGTFLNRAFDQVLMDVALHKCGVTFVLDRSGVTGDDGASHNGMWDMSILQVVPGLRLAAPRDPARLRELLNEAVEVDDAPTVVRFPKGS------PPEDIEAVDRAGGADILVRNGTKDVLVVAVGAMGTTAVDVAQRLTAQGIGVTVVDPRWVKPVDPAIV-ELAREHRLVVSIEDNGETGGCGAV 567
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS2_KITGR (1-deoxy-D-xylulose-5-phosphate synthase 2 OS=Kitasatospora griseola GN=dxs2 PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 5.495e-28 Identity = 71/199 (35.68%), Postives = 113/199 (56.78%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVA---ILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEE-GSVGGFGS 585 LA+ G+ P A+Y++FL R +DQV+ DV L KL V F +DRAG+ G DG +H G +D++ + +P + + AP D ++ + A + D P+ R+ +GN +G +P +++ + D A I+ G++ C+ AA +L Q IS TV D R+ KP+D L LA +H +++TVE+ G GG GS Sbjct: 377 LATNGLHPVVAVYATFLNRAFDQVLMDVALHKLGVTFVLDRAGVTGTDGASHNGMWDMSILQVVPGLRLAAPRDAEQVRLQLREAVEVADAPTVVRYSKGN-VGPAVPAVGTVGGMDVLRRPEADSADEAADVLIVSIGAMAPTCLEAAELLAQQGISSTVVDPRWVKPVDAAL-PGLAAQHRLVVTVEDNGRAGGVGS 573
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_MYCLE (1-deoxy-D-xylulose-5-phosphate synthase OS=Mycobacterium leprae GN=dxs PE=3 SV=2) HSP 1 Score: 123.25 bits (308), Expect = 9.373e-28 Identity = 67/192 (34.90%), Postives = 108/192 (56.25%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGG 576 LA + P AIYS+FL R +DQ++ DV L KLPV +DRAG+ G+DGP+H G +D++ + +P M V AP D L + A +DD P+ RFP+G+ + +P + + +++ V ++G G + A L +Q I VTV D R+ P+ D + +LA+ H++++T+E+ V G Sbjct: 375 LAMGRMHPVVAIYSTFLNRAFDQIMMDVALHKLPVTMVIDRAGITGSDGPSHNGMWDLSMLGIVPGMRVAAPRDAIRLREELGEALDVDDGPTAIRFPKGD-VCEDIPALKRRSGVDVLAVPATGLAQDVLLVGVGVFASMALAVAKRLHNQGIGVTVIDPRWVLPV-CDGVLELAHTHKLIVTLEDNGVNG 564
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_MYCLB (1-deoxy-D-xylulose-5-phosphate synthase OS=Mycobacterium leprae (strain Br4923) GN=dxs PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 9.373e-28 Identity = 67/192 (34.90%), Postives = 108/192 (56.25%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGG 576 LA + P AIYS+FL R +DQ++ DV L KLPV +DRAG+ G+DGP+H G +D++ + +P M V AP D L + A +DD P+ RFP+G+ + +P + + +++ V ++G G + A L +Q I VTV D R+ P+ D + +LA+ H++++T+E+ V G Sbjct: 375 LAMGRMHPVVAIYSTFLNRAFDQIMMDVALHKLPVTMVIDRAGITGSDGPSHNGMWDLSMLGIVPGMRVAAPRDAIRLREELGEALDVDDGPTAIRFPKGD-VCEDIPALKRRSGVDVLAVPATGLAQDVLLVGVGVFASMALAVAKRLHNQGIGVTVIDPRWVLPV-CDGVLELAHTHKLIVTLEDNGVNG 564
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_MYCSS (1-deoxy-D-xylulose-5-phosphate synthase OS=Mycobacterium sp. (strain MCS) GN=dxs PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 1.599e-27 Identity = 69/196 (35.20%), Postives = 110/196 (56.12%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEE-GSVGGFGS 585 LA G+ P AIYS+FL R +DQ++ DV L KLPV +DR+G+ G DG +H G +D++ + +P M V AP D A L + A ++D P+ RFP+G+ +G +P + +++ D V ++ G + A L+ Q I VTV D R+ P+ +++ + A H++++TVE+ G GG GS Sbjct: 375 LAMGGLHPVVAIYSTFLNRAFDQLMMDVALHKLPVTLVLDRSGVTGPDGASHNGMWDLSVLGIVPGMRVAAPRDGARLREELGEALDVNDAPTAIRFPKGD-VGEDIPAVRRHRGVDVLAEPADGLSDDVLLVAVGPFASMALTVAERLRKQGIGVTVVDPRWVLPV-PEVLTEFAAAHKLVVTVEDNGLHGGIGS 568
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_MYCSK (1-deoxy-D-xylulose-5-phosphate synthase OS=Mycobacterium sp. (strain KMS) GN=dxs PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 1.599e-27 Identity = 69/196 (35.20%), Postives = 110/196 (56.12%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEE-GSVGGFGS 585 LA G+ P AIYS+FL R +DQ++ DV L KLPV +DR+G+ G DG +H G +D++ + +P M V AP D A L + A ++D P+ RFP+G+ +G +P + +++ D V ++ G + A L+ Q I VTV D R+ P+ +++ + A H++++TVE+ G GG GS Sbjct: 375 LAMGGLHPVVAIYSTFLNRAFDQLMMDVALHKLPVTLVLDRSGVTGPDGASHNGMWDLSVLGIVPGMRVAAPRDGARLREELGEALDVNDAPTAIRFPKGD-VGEDIPAVRRHRGVDVLAEPADGLSDDVLLVAVGPFASMALTVAERLRKQGIGVTVVDPRWVLPV-PEVLTEFAAAHKLVVTVEDNGLHGGIGS 568
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_MYCSJ (1-deoxy-D-xylulose-5-phosphate synthase OS=Mycobacterium sp. (strain JLS) GN=dxs PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 1.599e-27 Identity = 69/196 (35.20%), Postives = 110/196 (56.12%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEE-GSVGGFGS 585 LA G+ P AIYS+FL R +DQ++ DV L KLPV +DR+G+ G DG +H G +D++ + +P M V AP D A L + A ++D P+ RFP+G+ +G +P + +++ D V ++ G + A L+ Q I VTV D R+ P+ +++ + A H++++TVE+ G GG GS Sbjct: 375 LAMGGLHPVVAIYSTFLNRAFDQLMMDVALHKLPVTLVLDRSGVTGPDGASHNGMWDLSVLGIVPGMRVAAPRDGARLREELGEALDVNDAPTAIRFPKGD-VGEDIPAVRRHRGVDVLAEPADGLSDDVLLVAVGPFASMALTVAERLRKQGIGVTVVDPRWVLPV-PEVLTEFAAAHKLVVTVEDNGLHGGIGS 568 The following BLAST results are available for this feature:
BLAST of CB322103 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB322103 ID=CB322103; Name=CB322103; organism=Citrus sinensis; type=EST; length=591bpback to top |