CB322103
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_RHOSR (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhodococcus sp. (strain RHA1) GN=dxs PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 2.727e-27 Identity = 75/199 (37.69%), Postives = 111/199 (55.78%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPR---GNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEE-GSVGGFGS 585 LA G+ P A+YS+FL R +DQ++ DV L KLPV +DRAG+ G DG +H G +D++ + +P M V AP D A L + A +DD P+ RFP+ G+ + AV + L GR + V I+ G+ + AA L+ Q IS TV D R+ P+ L++ LA ++ +++TVE+ G GG GS Sbjct: 377 LALGGLHPVVAVYSTFLNRAFDQLLMDVALLKLPVTLVLDRAGITGNDGASHNGMWDMSLLGIVPGMKVAAPRDTATLREELDEALAVDDGPTALRFPKGTVGDDVPAVSRLDGVVDILRAPSGR-----NDVLIVSVGAFAGLALAAAERLEQQGISATVVDPRWVLPVPESLVK-LAEDYTMVVTVEDSGLHGGVGS 569
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_MYCVP (1-deoxy-D-xylulose-5-phosphate synthase OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) GN=dxs PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 3.562e-27 Identity = 69/196 (35.20%), Postives = 110/196 (56.12%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEE-GSVGGFGS 585 LA G+ P AIYS+FL R +DQ++ DV L KLPV +DR+G+ G DG +H G +D++ + +P M V AP D A L + A + D P+ RFP+G+ +G +P + +++ + V ++ G + A+ L++Q I VTV D R+ P+ + I LA H++++T+E+ G GG GS Sbjct: 375 LAMGGMHPVVAIYSTFLNRAFDQMLMDVALHKLPVTVVLDRSGVTGPDGASHNGMWDLSILGIVPGMRVAAPRDGARLREELGEALDVSDGPTAIRFPKGD-VGEDIPAIERRGDVDVLAVPADGMSEDVLLVAVGPFAAMALAVADRLRNQGIGVTVVDPRWVLPVPEE-IATLATRHKLVVTLEDNGGHGGVGS 568
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_CHLTR (1-deoxy-D-xylulose-5-phosphate synthase OS=Chlamydia trachomatis GN=dxs PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 3.562e-27 Identity = 72/203 (35.47%), Postives = 108/203 (53.20%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKG-------TPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGS 585 +A G C+IYS+FL R D V HDV +Q+LPV FA+DRAGL DG +H G +D+ F+ +PNMV+ P + A ++ + ++++ P R+P +P N K +P+ G+ IL +GD + ++ G + + L IS TV D F KPLD L++ L H +I +EE S+ GG GS Sbjct: 380 IARSGTPVCCSIYSTFLHRAMDNVFHDVCMQELPVIFAIDRAGLAFHDGRSHHGIYDLGFLCSMPNMVICQPRN-ALVLERLFFSSLLWKSPCAIRYPN-------IPANEKASNSFFPFSPILPGEAEILCQGDDLLLIALGHMCNTALTVKEHLLDYGISTTVVDPIFIKPLDRKLLQSLLTHHSKVIILEEHSIHGGLGS 574
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_CHLTB (1-deoxy-D-xylulose-5-phosphate synthase OS=Chlamydia trachomatis (strain L2b/UCH-1/proctitis) GN=dxs PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 3.562e-27 Identity = 72/203 (35.47%), Postives = 108/203 (53.20%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKG-------TPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGS 585 +A G C+IYS+FL R D V HDV +Q+LPV FA+DRAGL DG +H G +D+ F+ +PNMV+ P + A ++ + ++++ P R+P +P N K +P+ G+ IL +GD + ++ G + + L IS TV D F KPLD L++ L H +I +EE S+ GG GS Sbjct: 380 IARSGTPVCCSIYSTFLHRAMDNVFHDVCMQELPVIFAIDRAGLAFHDGRSHHGIYDLGFLCSMPNMVICQPRN-ALVLERLFFSSLLWKSPCAIRYPN-------IPANEKASNSSFPFSPILPGEAEILCQGDDLLLIALGHMCNTALTVKEHLLDYGISTTVVDPIFIKPLDRKLLQSLLTHHSKVIILEEHSIHGGLGS 574
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_CHLTA (1-deoxy-D-xylulose-5-phosphate synthase OS=Chlamydia trachomatis (strain A/HAR-13 / ATCC VR-571B) GN=dxs PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 3.562e-27 Identity = 72/203 (35.47%), Postives = 108/203 (53.20%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKG-------TPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGS 585 +A G C+IYS+FL R D V HDV +Q+LPV FA+DRAGL DG +H G +D+ F+ +PNMV+ P + A ++ + ++++ P R+P +P N K +P+ G+ IL +GD + ++ G + + L IS TV D F KPLD L++ L H +I +EE S+ GG GS Sbjct: 380 IARSGTPVCCSIYSTFLHRAMDNVFHDVCMQELPVIFAIDRAGLAFHDGRSHHGIYDLGFLCSMPNMVICQPRN-ALVLERLFFSSLLWKSPCAIRYPN-------IPANEKASNSFFPFSPILPGEAEILCQGDDLLLIALGHMCNTALTVKEHLLDYGISTTVVDPIFIKPLDRKLLQSLLTHHSKVIILEEHSIHGGLGS 574
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_CHLT2 (1-deoxy-D-xylulose-5-phosphate synthase OS=Chlamydia trachomatis (strain L2/434/Bu / ATCC VR-902B) GN=dxs PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 3.562e-27 Identity = 72/203 (35.47%), Postives = 108/203 (53.20%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKG-------TPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGS 585 +A G C+IYS+FL R D V HDV +Q+LPV FA+DRAGL DG +H G +D+ F+ +PNMV+ P + A ++ + ++++ P R+P +P N K +P+ G+ IL +GD + ++ G + + L IS TV D F KPLD L++ L H +I +EE S+ GG GS Sbjct: 380 IARSGTPVCCSIYSTFLHRAMDNVFHDVCMQELPVIFAIDRAGLAFHDGRSHHGIYDLGFLCSMPNMVICQPRN-ALVLERLFFSSLLWKSPCAIRYPN-------IPANEKASNSSFPFSPILPGEAEILCQGDDLLLIALGHMCNTALTVKEHLLDYGISTTVVDPIFIKPLDRKLLQSLLTHHSKVIILEEHSIHGGLGS 574
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS1_KITGR (1-deoxy-D-xylulose-5-phosphate synthase 1 OS=Kitasatospora griseola GN=dxs1 PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 7.935e-27 Identity = 70/199 (35.18%), Postives = 112/199 (56.28%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILME---GDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEE-GSVGGFGS 585 LA+ G+ P A+Y++FL R +DQV+ DV L +L V F +DRAG+ G DG +H G +D++ + +P + + AP D A + V A ++D P+ RFP+G +G P + IG +L V ++ G + C+ AA +L + I+ TV D + KP+D L+ +LA H +++TVE+ G GG G+ Sbjct: 377 LATGGLHPVVAVYATFLNRAFDQVLMDVALHRLGVTFVLDRAGVTGNDGASHNGMWDLSVLQVVPGLRIAAPRDAARVREHVRQAVAVEDAPTVVRFPKGE-LGPEAPAIER-----IGGVDVLARTGPAPDVLLVAVGPMAAACLDAAALLAADGITATVVDPCWVKPVDPALV-ELAGAHRMVVTVEDNGRTGGVGA 568
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_CAMHC (1-deoxy-D-xylulose-5-phosphate synthase OS=Campylobacter hominis (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 / CH001A) GN=dxs PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.036e-26 Identity = 73/204 (35.78%), Postives = 112/204 (54.90%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTP-LEIGKGRILMEGD--RVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILI----TVEEGSVGGFGSLY 591 +A EG KP+ IYS+F+QR YDQV+HD+ + L AMDRAG+VG DG TH G FDI+F++ +PN+ + AP DE M+ + + + R+PRG+ +L K P + GK +L E + A++GYG+ V + + L D + D F KPLD + + LA + +I +V++G +G S + Sbjct: 361 MAKEGFKPYITIYSTFMQRAYDQVIHDLAIMNLSAVIAMDRAGIVGEDGETHEGCFDISFLNAIPNVSMCAPRDEQSFKDMI-EYSYVHEGLLAIRYPRGS---FILHEQFKDAPKISRGKSVLLRENKNAKTALIGYGNGVGRAYEVSIKL---DFETDLIDLVFAKPLDKEFLINLAKKDKIWYIFSDSVKKGGIGDILSAF 557
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_LEPBL (1-deoxy-D-xylulose-5-phosphate synthase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) GN=dxs PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.354e-26 Identity = 67/197 (34.01%), Postives = 102/197 (51.78%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSLY 591 + + + P+ IYS+FL R DQ+V DV L LPVRF +DRAG VG DG TH G FD+ ++ LPNM V PS+ +++ + D P RFP+ N + K L G R+L G +A+L GS++ + A +L+S SVT+ D + +PL + + + + + ++E V S Y Sbjct: 382 MTNGSIIPYMCIYSTFLTRAIDQLVQDVSLMNLPVRFVIDRAGCVGPDGETHQGLFDLGYLLGLPNMDVFVPSNGQDMIDSLRWMETYDKAPIAIRFPKAN-VDLKTLDFYKEVDLRPGTFRVLKRGTDLALLSIGSMIDEAKKATEILESAGFSVTLIDLIWLRPLGVEALNEELSNVRRFVIIDESYVDAGASGY 577
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_LEPBJ (1-deoxy-D-xylulose-5-phosphate synthase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) GN=dxs PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.354e-26 Identity = 67/197 (34.01%), Postives = 102/197 (51.78%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSLY 591 + + + P+ IYS+FL R DQ+V DV L LPVRF +DRAG VG DG TH G FD+ ++ LPNM V PS+ +++ + D P RFP+ N + K L G R+L G +A+L GS++ + A +L+S SVT+ D + +PL + + + + + ++E V S Y Sbjct: 382 MTNGSIIPYMCIYSTFLTRAIDQLVQDVSLMNLPVRFVIDRAGCVGPDGETHQGLFDLGYLLGLPNMDVFVPSNGQDMIDSLRWMETYDKAPIAIRFPKAN-VDLKTLDFYKEVDLRPGTFRVLKRGTDLALLSIGSMIDEAKKATEILESAGFSVTLIDLIWLRPLGVEALNEELSNVRRFVIIDESYVDAGASGY 577 The following BLAST results are available for this feature:
BLAST of CB322103 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB322103 ID=CB322103; Name=CB322103; organism=Citrus sinensis; type=EST; length=591bpback to top |