CB322103
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_FUSNN (1-deoxy-D-xylulose-5-phosphate synthase OS=Fusobacterium nucleatum subsp. nucleatum GN=dxs PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 3.015e-26 Identity = 64/196 (32.65%), Postives = 109/196 (55.61%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGS 585 LA G KP+ IYS+F+QR Q++HDV +Q LPVRF +DR+G+VG DG TH G +D++F + N V+ P+ EL + + + P R PR ++ N+ PLEIG+ +++ +G + + G++++ + + L+++ I T+ A KPLD + + E++ + +EE V FG+ Sbjct: 353 LAKSGKKPYVCIYSTFIQRAISQLIHDVSIQNLPVRFIIDRSGIVGEDGKTHNGIYDLSFFLSIQNFTVLCPTTAKELGQALEISKNFNLGPLVIRIPR----DSIFDIENE-EPLEIGRWKVIKKGSKNLFIATGTMLKIILEIYDKLQNRGIYCTIISAASVKPLDENYLLNYIKEYDNIFVLEENYVKNSFGT 543
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS1_STRCO (1-deoxy-D-xylulose-5-phosphate synthase 1 OS=Streptomyces coelicolor GN=dxs1 PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 3.015e-26 Identity = 69/198 (34.85%), Postives = 111/198 (56.06%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDR--VAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGS-VGGFGS 585 LA+ G+ P A+Y++FL R +DQ++ DV L + V F +DRAG+ G DG +H G +D++ + +P + + AP D +L + A +DD P+ RFP+ +G +P ++ IG +L DR V ++ G + C+ AA +L+++ I TV D R+ KP+D L LA H ++ VE+ S G GS Sbjct: 377 LATGGLHPVVAVYATFLNRAFDQLLMDVALHRCGVTFVLDRAGVTGVDGASHNGMWDMSVLQVVPGLRIAAPRDADQLRTQLREAVAVDDAPTLLRFPK-ESVGPAVPAVDR-----IGGLDVLHTADRSEVLLVAVGVMAPVCLGAAELLEARGIGCTVVDPRWVKPVDPAL-APLAARHRLVAVVEDNSRAAGVGS 567
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_STRC1 (1-deoxy-D-xylulose-5-phosphate synthase OS=Streptomyces sp. (strain CL190) GN=dxs PE=1 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 5.143e-26 Identity = 66/198 (33.33%), Postives = 112/198 (56.57%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDR--VAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGS-VGGFGS 585 LA+ G+ P A+Y++FL R +DQ++ DV L + V F +DRAG+ G DG +H G +D++ + +P + + AP D + + A +DD P+ RFP+ +G +P ++ +G +L +R V ++ G + Q C+ A +L+++ I TV D R+ KP+D ++ LA EH ++ VE+ S G GS Sbjct: 377 LATGGLHPVVAVYATFLNRAFDQLLMDVALHRCGVTFVLDRAGVTGVDGASHNGMWDMSVLQVVPGLRIAAPRDADHVRAQLREAVAVDDAPTLIRFPK-ESVGPRIPALDR-----VGGLDVLHRDERPEVLLVAVGVMAQVCLQTAELLRARGIGCTVVDPRWVKPVD-PVLPPLAAEHRLVAVVEDNSRAAGVGS 567
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS1_STRAW (1-deoxy-D-xylulose-5-phosphate synthase 1 OS=Streptomyces avermitilis GN=dxs1 PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 5.143e-26 Identity = 63/189 (33.33%), Postives = 107/189 (56.61%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGS 567 LA+ G+ P A+Y++FL R +DQ++ DV L + V F +DRAG+ G DG +H G +D++ + +P + + AP D +L + A +DD P+ RFP+ +G +P + +++ E +V ++ G + C+ AA +L+++ I TV D R+ KP+D L LA EH ++ VE+ S Sbjct: 377 LATGGLHPVVAVYATFLNRAFDQLLMDVALHRCGVTFVLDRAGVTGVDGASHNGMWDMSILQVVPGLRIAAPRDADQLRAQLREAVAVDDAPTLLRFPK-ESVGPAIPAVDHVGGMDV--LHRFPESPQVLLVAVGVMAPVCLQAAELLEARGIGCTVVDPRWVKPVDPSL-PGLAAEHRLVAVVEDNS 561
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_RENSM (1-deoxy-D-xylulose-5-phosphate synthase OS=Renibacterium salmoninarum (strain ATCC 33209 / DSM 20767 / IFO 15589) GN=dxs PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 8.773e-26 Identity = 69/199 (34.67%), Postives = 112/199 (56.28%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGA---VLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEG-SVGGFGS 585 +A G+ P A+Y++FL RG+DQ++ DV L K V +DRAG+ G DGP+H G +D++ + +P + + AP D L + A I D P+ R+ +GN +GA + + G + + E D V ++ G++ + + AN+L +Q IS TV D R+ P+ +I +LA +H I+I +E+G GG GS Sbjct: 385 MAFGGLHPVVAMYATFLNRGFDQLLMDVALHKAGVTVVLDRAGVTGPDGPSHHGMWDLSMLQIIPGLHLAAPRDATRLREELREAVAISDAPTVLRYSKGN-VGAEVEAIERLDDGVDILARRPAGSTEND-VLLVSVGAMSEMSLQVANLLGAQGISSTVVDPRWVLPVPQSII-ELAAQHRIVIVIEDGVRAGGVGS 580
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_MYXXD (1-deoxy-D-xylulose-5-phosphate synthase OS=Myxococcus xanthus (strain DK 1622) GN=dxs PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.146e-25 Identity = 75/200 (37.50%), Postives = 106/200 (53.00%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKG-----TPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGS 585 LAS G +P C IYS+FLQR YDQ++HDV L LPV FA+DRAGLVGADG TH G +D+ + LP++ + +P +L M+ T A+ S RFPRG LPP +G PL + + E R+ ++ G + +AA + +V DAR PLD + + +++ E + GG GS Sbjct: 337 LASAGARPVCCIYSTFLQRAYDQIIHDVCLPGLPVVFAVDRAGLVGADGATHQGTYDVASLRPLPDLHLWSPMVGEDLAPMLDT-ALAAPHASVIRFPRG-----TLPPLPEGLGAGEAPLRGARWLLRAEQPRLTLVTLGPL----GIAALEAARGEPGWSVLDARCASPLDEAALLEAGRSGHVVVAEEGTTRGGLGS 526
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_LEPIN (1-deoxy-D-xylulose-5-phosphate synthase OS=Leptospira interrogans GN=dxs PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.146e-25 Identity = 62/174 (35.63%), Postives = 97/174 (55.75%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQ 522 + + + P+ IYS+FL R DQ+V DV L LPVRF +DRAG VG DG TH G FD+ ++ LPNM V PS+ +L+ + D P RFP+ + + K T L+ G R+ G VA++ GS++ + A+ L+++ +SVT+ D + +PL + + + Sbjct: 381 MTNGNIIPYMCIYSTFLTRAMDQLVQDVSLMNLPVRFVIDRAGCVGPDGETHQGLFDLGYLLGLPNMDVFVPSNGQDLIDALRWMEKYDKSPVAIRFPK-SSVDLKTLDFYKETELQPGTFRVFKRGTDVALISIGSMIDEAKKASERLENEGLSVTLIDLVWLRPLGAEALNE 553
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_LEPIC (1-deoxy-D-xylulose-5-phosphate synthase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=dxs PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.146e-25 Identity = 62/174 (35.63%), Postives = 97/174 (55.75%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQ 522 + + + P+ IYS+FL R DQ+V DV L LPVRF +DRAG VG DG TH G FD+ ++ LPNM V PS+ +L+ + D P RFP+ + + K T L+ G R+ G VA++ GS++ + A+ L+++ +SVT+ D + +PL + + + Sbjct: 381 MTNGNIIPYMCIYSTFLTRAMDQLVQDVSLMNLPVRFVIDRAGCVGPDGETHQGLFDLGYLLGLPNMDVFVPSNGQDLIDALRWMEKYDKSPVAIRFPK-SSVDLKTLDFYKETELQPGTFRVFKRGTDVALISIGSMIDEAKKASERLENEGLSVTLIDLVWLRPLGAEALNE 553
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_CHLAB (1-deoxy-D-xylulose-5-phosphate synthase OS=Chlamydophila abortus GN=dxs PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.146e-25 Identity = 67/192 (34.90%), Postives = 97/192 (50.52%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGG 576 +A C+IYS+FL R D V HDV LQ LPV F +DRAGL DG +H G +D++F+ +PNM++ P + + +++ RPS R+P + + + G G IL +G+ V I+G G + + L S IS TV D F KP D +L L H +I +EE S+ G Sbjct: 383 IAKANTPVICSIYSTFLHRAMDNVFHDVCLQNLPVIFGIDRAGLAYGDGCSHHGIYDLSFLRAMPNMIICQPRSSI-VFQQLLQSSLHWQRPSAIRYPNIPALQGDPIATDINLYRDPGLGEILSQGEDVLIVGLGHMCSAALSIKLQLLSHGISATVVDPIFIKPFDNNLFSILLMHHSKVIIIEEHSIRG 573
BLAST of CB322103 vs. ExPASy Swiss-Prot
Match: DXS_RHOE4 (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhodococcus erythropolis (strain PR4 / NBRC 100887) GN=dxs PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 1.954e-25 Identity = 68/196 (34.69%), Postives = 108/196 (55.10%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGS 585 LA G+ P AIYS+FL R +DQ++ DV L K PV +DRAG+ G DG +H G +D++ + +P + V AP D L + A ++DD P+ RFP+G A+ +++ K GD V ++ G + A L Q ISV V D R+ P+ L++ +A+++ +++T+E+G + GG GS Sbjct: 377 LALGGLHPVVAIYSTFLNRAFDQLLMDVALLKQPVTVVLDRAGVTGVDGASHNGVWDLSLLGIIPGIRVAAPRDADTLREELDEALLVDDGPTVVRFPKGAVPEAIPAVKRLDGMVDVLKASEGERGD-VLLVAVGPFASLALEIAERLDKQGISVAVVDPRWVLPVADSLVK-MADKYALVVTIEDGGLHGGIGS 570 The following BLAST results are available for this feature:
BLAST of CB322103 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB322103 ID=CB322103; Name=CB322103; organism=Citrus sinensis; type=EST; length=591bpback to top |