CB322168

Overview
NameCB322168
Unique NameCB322168
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length184
Libraries
Library NameType
Mature leaf blade cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB322168 vs. ExPASy Swiss-Prot
Match: BGL07_ORYSJ (Beta-glucosidase 7 OS=Oryza sativa subsp. japonica GN=BGLU7 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 8.425e-15
Identity = 34/55 (61.82%), Postives = 42/55 (76.36%), Query Frame = 3
Query:    6 GLLSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRCSK 170
            G L+ ++   F +YADFCFKTFG+RVK+W TFNEPR+VA LGYD G   P RC+K
Sbjct:  171 GWLNAKMADLFTEYADFCFKTFGNRVKHWFTFNEPRIVALLGYDQGTNPPKRCTK 225          
BLAST of CB322168 vs. ExPASy Swiss-Prot
Match: BGL27_ORYSJ (Beta-glucosidase 27 OS=Oryza sativa subsp. japonica GN=BGLU27 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.100e-14
Identity = 34/52 (65.38%), Postives = 40/52 (76.92%), Query Frame = 3
Query:   12 LSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRCS 167
            LS+ +VKDF DYAD CF+ FGDRVK+W TFNEP +  A GY +G  APGRCS
Sbjct:  161 LSENIVKDFVDYADVCFREFGDRVKSWNTFNEPMIFCAGGYGSGTKAPGRCS 212          
BLAST of CB322168 vs. ExPASy Swiss-Prot
Match: BGL24_ORYSJ (Beta-glucosidase 24 OS=Oryza sativa subsp. japonica GN=BGLU24 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.437e-14
Identity = 34/54 (62.96%), Postives = 39/54 (72.22%), Query Frame = 3
Query:    6 GLLSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRCS 167
            G LS  +V+DF DYAD CF+ FGDRVK W+TFNEP   +  GY NG  APGRCS
Sbjct:  164 GFLSNLIVEDFRDYADICFREFGDRVKYWITFNEPWSFSIGGYSNGILAPGRCS 217          
BLAST of CB322168 vs. ExPASy Swiss-Prot
Match: BGL13_ARATH (Beta-glucosidase 13 OS=Arabidopsis thaliana GN=BGLU13 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.877e-14
Identity = 34/55 (61.82%), Postives = 36/55 (65.45%), Query Frame = 3
Query:    6 GLLSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRCSK 170
            G     +V DF DYAD CFK FGDRVK+WMT NEP  V   GY  G  APGRCSK
Sbjct:  167 GFFGAEIVNDFRDYADICFKNFGDRVKHWMTLNEPLTVVQQGYVAGVMAPGRCSK 221          
BLAST of CB322168 vs. ExPASy Swiss-Prot
Match: BGL28_ORYSJ (Beta-glucosidase 28 OS=Oryza sativa subsp. japonica GN=BGLU28 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.451e-14
Identity = 33/54 (61.11%), Postives = 37/54 (68.52%), Query Frame = 3
Query:    6 GLLSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRCS 167
            G LS+ +VKD+ DYAD CF  FGDRVK W TFNEP +    GY  G  APGRCS
Sbjct:  159 GFLSENIVKDYVDYADLCFSLFGDRVKLWNTFNEPTIFCMNGYATGIMAPGRCS 212          
BLAST of CB322168 vs. ExPASy Swiss-Prot
Match: BGL20_ARATH (Beta-glucosidase 20 OS=Arabidopsis thaliana GN=BGLU20 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.451e-14
Identity = 33/55 (60.00%), Postives = 43/55 (78.18%), Query Frame = 3
Query:    6 GLLSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRCSK 170
            G LS R++KDF +YA+F F+ +GD+VK+W+TFNEP V +  GYD G  APGRCSK
Sbjct:  172 GFLSDRIIKDFTEYANFTFQEYGDKVKHWITFNEPWVFSRAGYDIGNKAPGRCSK 226          
BLAST of CB322168 vs. ExPASy Swiss-Prot
Match: BGL03_ORYSJ (Beta-glucosidase 3 OS=Oryza sativa subsp. japonica GN=BGLU3 PE=2 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 2.451e-14
Identity = 35/58 (60.34%), Postives = 39/58 (67.24%), Query Frame = 3
Query:    6 GLLSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRCSKAFG 179
            G LS R+V+DF  YAD CF+ FGDRV +W    EP V A  GYD G FAPGRCS  FG
Sbjct:  156 GWLSPRIVEDFTAYADVCFREFGDRVSHWTILAEPNVAALGGYDTGEFAPGRCSDPFG 213          
BLAST of CB322168 vs. ExPASy Swiss-Prot
Match: BGL34_ORYSJ (Beta-glucosidase 34 OS=Oryza sativa subsp. japonica GN=BGLU34 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 3.202e-14
Identity = 31/54 (57.41%), Postives = 41/54 (75.93%), Query Frame = 3
Query:    6 GLLSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRCS 167
            G L ++++ D+A YA+ CF+ FGDRVK+W+TFNEP  VA   YD+G  APGRCS
Sbjct:  166 GWLDRQIINDYAVYAETCFQAFGDRVKHWITFNEPHTVAVQAYDSGMHAPGRCS 219          
BLAST of CB322168 vs. ExPASy Swiss-Prot
Match: BGL15_ARATH (Beta-glucosidase 15 OS=Arabidopsis thaliana GN=BGLU15 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 3.202e-14
Identity = 34/55 (61.82%), Postives = 36/55 (65.45%), Query Frame = 3
Query:    6 GLLSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRCSK 170
            G     +V DF DYAD CFK FGDRVK+WMT NEP  V   GY  G  APGRCSK
Sbjct:  167 GFRGAEIVNDFRDYADICFKNFGDRVKHWMTLNEPLTVVQQGYVAGVMAPGRCSK 221          
BLAST of CB322168 vs. ExPASy Swiss-Prot
Match: BGL30_ORYSJ (Beta-glucosidase 30 OS=Oryza sativa subsp. japonica GN=BGLU30 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 4.181e-14
Identity = 32/54 (59.26%), Postives = 40/54 (74.07%), Query Frame = 3
Query:    6 GLLSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRCS 167
            G LS+ +VK++ D+A+ CF+ FGDRVK W TFNEP   +A GY  G FAPGRCS
Sbjct:  162 GFLSEDIVKEYVDFAEVCFREFGDRVKYWTTFNEPFTYSAYGYGKGVFAPGRCS 215          
The following BLAST results are available for this feature:
BLAST of CB322168 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 78
Match NameE-valueIdentityDescription
BGL07_ORYSJ8.425e-1561.82Beta-glucosidase 7 OS=Oryza sativa subsp. japonica... [more]
BGL27_ORYSJ1.100e-1465.38Beta-glucosidase 27 OS=Oryza sativa subsp. japonic... [more]
BGL24_ORYSJ1.437e-1462.96Beta-glucosidase 24 OS=Oryza sativa subsp. japonic... [more]
BGL13_ARATH1.877e-1461.82Beta-glucosidase 13 OS=Arabidopsis thaliana GN=BGL... [more]
BGL28_ORYSJ2.451e-1461.11Beta-glucosidase 28 OS=Oryza sativa subsp. japonic... [more]
BGL20_ARATH2.451e-1460.00Beta-glucosidase 20 OS=Arabidopsis thaliana GN=BGL... [more]
BGL03_ORYSJ2.451e-1460.34Beta-glucosidase 3 OS=Oryza sativa subsp. japonica... [more]
BGL34_ORYSJ3.202e-1457.41Beta-glucosidase 34 OS=Oryza sativa subsp. japonic... [more]
BGL15_ARATH3.202e-1461.82Beta-glucosidase 15 OS=Arabidopsis thaliana GN=BGL... [more]
BGL30_ORYSJ4.181e-1459.26Beta-glucosidase 30 OS=Oryza sativa subsp. japonic... [more]

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Properties
Property NameValue
Genbank descriptionEST0286 Mature leaf blade cDNA subtraction library Citrus sinensis cDNA clone 24LB206 similar to beta-glucosidase (acc# AAM61427), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB322168 ID=CB322168; Name=CB322168; organism=Citrus sinensis; type=EST; length=184bp
ACATTGGATTGCTCAGTAAGAGAGTAGTGAAAGACTTTGCTGATTACGCT
GACTTTTGCTTCAAGACATTTGGAGACAGAGTAAAGAATTGGATGACATT
TAACGAACCAAGAGTGGTAGCTGCTCTTGGTTATGATAATGGTTTCTTTG
CTCCTGGGAGGTGTTCCAAAGCATTTGGAAATTG
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