CB322168

Overview
NameCB322168
Unique NameCB322168
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length184
Libraries
Library NameType
Mature leaf blade cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB322168 vs. ExPASy Swiss-Prot
Match: BGL23_ARATH (Beta-glucosidase 23 OS=Arabidopsis thaliana GN=BGLU23 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.217e-13
Identity = 33/54 (61.11%), Postives = 42/54 (77.78%), Query Frame = 3
Query:    6 GLLSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRCS 167
            G LS+R+VKDF +YADF F+ +G +VK+W+TFNEP V +  GYD G  APGRCS
Sbjct:  170 GFLSERIVKDFREYADFVFQEYGGKVKHWITFNEPWVFSHAGYDVGKKAPGRCS 223          
BLAST of CB322168 vs. ExPASy Swiss-Prot
Match: BGL22_ARATH (Beta-glucosidase 22 OS=Arabidopsis thaliana GN=BGLU22 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.217e-13
Identity = 33/55 (60.00%), Postives = 41/55 (74.55%), Query Frame = 3
Query:    6 GLLSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRCSK 170
            G LS+ +VKDF +YAD+ F  +G +VKNW+TFNEP V A  GYD G  APGRCS+
Sbjct:  171 GFLSENIVKDFREYADYVFTEYGGKVKNWITFNEPWVFAHAGYDVGKKAPGRCSR 225          
BLAST of CB322168 vs. ExPASy Swiss-Prot
Match: BGL21_ARATH (Beta-glucosidase 21 OS=Arabidopsis thaliana GN=BGLU21 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.217e-13
Identity = 33/55 (60.00%), Postives = 41/55 (74.55%), Query Frame = 3
Query:    6 GLLSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRCSK 170
            G LS+ +VKDF +YAD+ F  +G +VKNW+TFNEP V A  GYD G  APGRCS+
Sbjct:  171 GFLSQNIVKDFREYADYVFTEYGGKVKNWITFNEPWVFAHAGYDLGKKAPGRCSR 225          
BLAST of CB322168 vs. ExPASy Swiss-Prot
Match: BGL22_ORYSJ (Beta-glucosidase 22 OS=Oryza sativa subsp. japonica GN=BGLU22 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.075e-13
Identity = 32/58 (55.17%), Postives = 40/58 (68.97%), Query Frame = 3
Query:    6 GLLSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRCSKAFG 179
            G LS RV+ DF  YAD CF+ FGDRV++W T +EP V++   YD+G F P RCS  FG
Sbjct:  174 GWLSPRVIDDFTAYADVCFREFGDRVRHWTTMDEPNVLSIAAYDSGAFPPCRCSPPFG 231          
BLAST of CB322168 vs. ExPASy Swiss-Prot
Match: BGL47_ARATH (Beta-glucosidase 47 OS=Arabidopsis thaliana GN=BGLU47 PE=2 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 2.710e-13
Identity = 32/57 (56.14%), Postives = 39/57 (68.42%), Query Frame = 3
Query:   12 LSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRCSKAFGN 182
            L+ ++ +DF  YA+ CF+ FGDRVK W TFNEP V   LGY  G + P RCSK FGN
Sbjct:  190 LNPQIREDFEHYANICFRHFGDRVKFWSTFNEPNVQVILGYRTGTYPPSRCSKPFGN 246          
BLAST of CB322168 vs. ExPASy Swiss-Prot
Match: BGL26_ARATH (Beta-glucosidase 26, peroxisomal OS=Arabidopsis thaliana GN=BGLU26 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.710e-13
Identity = 32/55 (58.18%), Postives = 38/55 (69.09%), Query Frame = 3
Query:    6 GLLSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRCSK 170
            G LS++++ DF DYA  CF+ FGDRV  W T NEP V +  GYD G  APGRCSK
Sbjct:  150 GFLSEQIIDDFRDYASLCFERFGDRVSLWCTMNEPWVYSVAGYDTGRKAPGRCSK 204          
BLAST of CB322168 vs. ExPASy Swiss-Prot
Match: BGL19_ORYSJ (Beta-glucosidase 19 OS=Oryza sativa subsp. japonica GN=BGLU19 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.710e-13
Identity = 33/58 (56.90%), Postives = 40/58 (68.97%), Query Frame = 3
Query:    6 GLLSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRCSKAFG 179
            G +S +VV DFA YAD CF+ FGDRV +W T  EP V+A  GYD+G+  P RCS  FG
Sbjct:  176 GWVSPKVVDDFAAYADVCFREFGDRVAHWTTSIEPNVMAQSGYDDGYLPPNRCSYPFG 233          
BLAST of CB322168 vs. ExPASy Swiss-Prot
Match: BGL18_ARATH (Beta-glucosidase 18 OS=Arabidopsis thaliana GN=BGLU18 PE=1 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 2.710e-13
Identity = 32/54 (59.26%), Postives = 41/54 (75.93%), Query Frame = 3
Query:    6 GLLSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRCS 167
            G LS R+V+DF +YA+F F  +G +VK+W+TFNEP V +  GYDNG  APGRCS
Sbjct:  174 GFLSGRIVQDFTEYANFTFHEYGHKVKHWITFNEPWVFSRAGYDNGKKAPGRCS 227          
BLAST of CB322168 vs. ExPASy Swiss-Prot
Match: BGL13_ORYSJ (Beta-glucosidase 13 OS=Oryza sativa subsp. japonica GN=BGLU13 PE=2 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 2.710e-13
Identity = 33/60 (55.00%), Postives = 40/60 (66.67%), Query Frame = 3
Query:    6 GLLSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGY-DNGFFAPGRCSKAFGN 182
            G LS  ++ D+ +YA+ CFK FGDRVK+W+TFNEP      GY   G FAPGRCS   GN
Sbjct:  166 GFLSPNIINDYKEYAETCFKEFGDRVKHWITFNEPLSFCVAGYASGGMFAPGRCSPWEGN 225          
BLAST of CB322168 vs. ExPASy Swiss-Prot
Match: BGL24_ARATH (Beta-glucosidase 24 OS=Arabidopsis thaliana GN=BGLU24 PE=2 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 3.540e-13
Identity = 33/54 (61.11%), Postives = 40/54 (74.07%), Query Frame = 3
Query:    6 GLLSKRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRCS 167
            G LS  +VKDF +YA+F FK +G +VK+W+TFNEP V A  GYD G  APGRCS
Sbjct:  174 GFLSAHIVKDFREYAEFVFKEYGGKVKHWITFNEPWVFAHAGYDVGKKAPGRCS 227          
The following BLAST results are available for this feature:
BLAST of CB322168 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 78
Match NameE-valueIdentityDescription
BGL23_ARATH1.217e-1361.11Beta-glucosidase 23 OS=Arabidopsis thaliana GN=BGL... [more]
BGL22_ARATH1.217e-1360.00Beta-glucosidase 22 OS=Arabidopsis thaliana GN=BGL... [more]
BGL21_ARATH1.217e-1360.00Beta-glucosidase 21 OS=Arabidopsis thaliana GN=BGL... [more]
BGL22_ORYSJ2.075e-1355.17Beta-glucosidase 22 OS=Oryza sativa subsp. japonic... [more]
BGL47_ARATH2.710e-1356.14Beta-glucosidase 47 OS=Arabidopsis thaliana GN=BGL... [more]
BGL26_ARATH2.710e-1358.18Beta-glucosidase 26, peroxisomal OS=Arabidopsis th... [more]
BGL19_ORYSJ2.710e-1356.90Beta-glucosidase 19 OS=Oryza sativa subsp. japonic... [more]
BGL18_ARATH2.710e-1359.26Beta-glucosidase 18 OS=Arabidopsis thaliana GN=BGL... [more]
BGL13_ORYSJ2.710e-1355.00Beta-glucosidase 13 OS=Oryza sativa subsp. japonic... [more]
BGL24_ARATH3.540e-1361.11Beta-glucosidase 24 OS=Arabidopsis thaliana GN=BGL... [more]

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Properties
Property NameValue
Genbank descriptionEST0286 Mature leaf blade cDNA subtraction library Citrus sinensis cDNA clone 24LB206 similar to beta-glucosidase (acc# AAM61427), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB322168 ID=CB322168; Name=CB322168; organism=Citrus sinensis; type=EST; length=184bp
ACATTGGATTGCTCAGTAAGAGAGTAGTGAAAGACTTTGCTGATTACGCT
GACTTTTGCTTCAAGACATTTGGAGACAGAGTAAAGAATTGGATGACATT
TAACGAACCAAGAGTGGTAGCTGCTCTTGGTTATGATAATGGTTTCTTTG
CTCCTGGGAGGTGTTCCAAAGCATTTGGAAATTG
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