CB322179
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB322179 vs. ExPASy Swiss-Prot
Match: DAPF_NITEC (Diaminopimelate epimerase OS=Nitrosomonas eutropha (strain C91) GN=dapF PE=3 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 9.951e-11 Identity = 35/106 (33.02%), Postives = 52/106 (49.06%), Query Frame = -3 Query: 85 VDKLNLAEIGPKFEHHSVFPARTNTEFVEIISPSQLKMRVWERXXXXXXXXXXXXXXXXXXXVLEGHAERRCTVDLPGGPLDIEWKEEDNHVYMTGPAEVVFYGSV 402 +D + GPK E H +FP R N F++II + +++RV+ER +L G + V + GG L I W +D V+MTGPA VF G++ Sbjct: 171 IDLAPVTTEGPKIEAHPLFPERVNAGFMQIIDRAHIRLRVFERGTGETLACGTGACAAVVCGILRGLLDTTVQVAMHGGNLQIRWDGKDKPVWMTGPAITVFEGTI 276
BLAST of CB322179 vs. ExPASy Swiss-Prot
Match: DAPF_HAES2 (Diaminopimelate epimerase OS=Haemophilus somnus (strain 2336) GN=dapF PE=3 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 9.951e-11 Identity = 35/108 (32.41%), Postives = 55/108 (50.93%), Query Frame = -3 Query: 79 VDKLNLAEIGPKFEHHSVFPARTNTEFVEIISPSQLKMRVWERXXXXXXXXXXXXXXXXXXXVLEGHAERRCTVDLPGGPLDIEWKEEDNHVYMTGPAEVVFYGSVLL 402 + N+ +GP E H FP R N F++II+ + +K+RV+ER +++G VDLPGG L IEW+ + + +YMTG A ++ G + L Sbjct: 167 IQHANIEILGPLLESHERFPERVNAGFMQIINRNHIKLRVYERGAGETQACGSGACAAVAVGIMQGVLGSCVQVDLPGGRLMIEWQGKGHPLYMTGEATHIYDGVIRL 274
BLAST of CB322179 vs. ExPASy Swiss-Prot
Match: DAPF_HAEIG (Diaminopimelate epimerase OS=Haemophilus influenzae (strain PittGG) GN=dapF PE=3 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 9.951e-11 Identity = 34/108 (31.48%), Postives = 52/108 (48.15%), Query Frame = -3 Query: 79 VDKLNLAEIGPKFEHHSVFPARTNTEFVEIISPSQLKMRVWERXXXXXXXXXXXXXXXXXXXVLEGHAERRCTVDLPGGPLDIEWKEEDNHVYMTGPAEVVFYGSVLL 402 + N+ ++GP E H FP R N F++II+ +K+RV+ER +++G VDL GG L IEW + +YMTG A ++ G + L Sbjct: 167 IQTANVEQLGPLLESHERFPERVNAGFMQIINKEHIKLRVYERGAGETQACGSGACAAVAVGIMQGLLNNNVQVDLSGGSLMIEWNGVGHPLYMTGEATHIYDGFITL 274
BLAST of CB322179 vs. ExPASy Swiss-Prot
Match: DAPF_ECO27 (Diaminopimelate epimerase OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=dapF PE=3 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 9.951e-11 Identity = 35/108 (32.41%), Postives = 52/108 (48.15%), Query Frame = -3 Query: 79 VDKLNLAEIGPKFEHHSVFPARTNTEFVEIISPSQLKMRVWERXXXXXXXXXXXXXXXXXXXVLEGHAERRCTVDLPGGPLDIEWKEEDNHVYMTGPAEVVFYGSVLL 402 VD + +GP E H FP R N F++++ +++RV+ER + +G V+LPGG LDI WK + +YMTGPA V+ G + L Sbjct: 167 VDTAAVETLGPVLESHERFPERANIGFMQVVKREHIRLRVFERGAGETQACGSGACAAVAVGIQQGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274 The following BLAST results are available for this feature:
BLAST of CB322179 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 204
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Sequences
The
following sequences are available for this feature:
EST sequence >CB322179 ID=CB322179; Name=CB322179; organism=Citrus sinensis; type=EST; length=425bpback to top |