CB322179
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB322179 vs. ExPASy Swiss-Prot
Match: DAPF_EUBR3 (Diaminopimelate epimerase OS=Eubacterium rectale (strain ATCC 33656 / VPI 0990) GN=dapF PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 4.171e-17 Identity = 45/101 (44.55%), Postives = 57/101 (56.44%), Query Frame = -3 Query: 85 LAEIGPKFEHHSVFPARTNTEFVEIISPSQLKMRVWERXXXXXXXXXXXXXXXXXXXVLEGHAERRCTVDLPGGPLDIEWKEEDNHVYMTGPAEVVFYGSV 387 L + GP FE+H +FP RTNTEFVEI+S ++ KMRVWER +L + + V L GG L IE+ E NHV+MTGPA VF G + Sbjct: 182 LEKYGPLFENHKMFPKRTNTEFVEILSRNEAKMRVWERGSAETWACGTGTCATVMACILNKKTDNKVLVHLRGGDLTIEYIPETNHVFMTGPATEVFSGEI 282
BLAST of CB322179 vs. ExPASy Swiss-Prot
Match: DAPF_DESRM (Diaminopimelate epimerase OS=Desulfotomaculum reducens (strain MI-1) GN=dapF PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 4.171e-17 Identity = 43/104 (41.35%), Postives = 60/104 (57.69%), Query Frame = -3 Query: 91 VDKLNLAEIGPKFEHHSVFPARTNTEFVEIISPSQLKMRVWERXXXXXXXXXXXXXXXXXXXVLEGHAERRCTVDLPGGPLDIEWKEEDNHVYMTGPAEVVFYG 402 ++ ++L ++GP+ E H FP +TN EFV+++ P++++M VWER VL G ER TV LPGG L IEW E+ +YMTGPA VF G Sbjct: 172 LEDISLTQVGPQIEVHPAFPKKTNVEFVQVLGPNEVRMVVWERGAGPTMACGTGACAVAVAGVLNGFTERMVTVHLPGGSLMIEW-AENGRIYMTGPATEVFSG 274
BLAST of CB322179 vs. ExPASy Swiss-Prot
Match: DAPF_DESAP (Diaminopimelate epimerase OS=Desulforudis audaxviator (strain MP104C) GN=dapF PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 4.171e-17 Identity = 46/104 (44.23%), Postives = 56/104 (53.85%), Query Frame = -3 Query: 91 VDKLNLAEIGPKFEHHSVFPARTNTEFVEIISPSQLKMRVWERXXXXXXXXXXXXXXXXXXXVLEGHAERRCTVDLPGGPLDIEWKEEDNHVYMTGPAEVVFYG 402 +D + GP E H FPARTN EFVE++SP ++ +RVWER VL G RR V LPGG L IEW ++ VYM+GPAE VF G Sbjct: 170 LDDAGFRKYGPLLEVHPAFPARTNVEFVEVLSPGEVAVRVWERGVGPTPACGTGACAVAVAGVLTGRTARRVHVRLPGGVLLIEWPDDAGPVYMSGPAEEVFDG 273
BLAST of CB322179 vs. ExPASy Swiss-Prot
Match: DAPF_PELTS (Diaminopimelate epimerase OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=dapF PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 9.293e-17 Identity = 45/104 (43.27%), Postives = 56/104 (53.85%), Query Frame = -3 Query: 91 VDKLNLAEIGPKFEHHSVFPARTNTEFVEIISPSQLKMRVWERXXXXXXXXXXXXXXXXXXXVLEGHAERRCTVDLPGGPLDIEWKEEDNHVYMTGPAEVVFYG 402 +D + GP E H FP RTN EF+++++P ++KMRVWER VL G+ RR TV L G L IEW E HVYM+GPAE VF G Sbjct: 172 LDAVPFQTAGPLIETHPAFPRRTNVEFIQVLTPEEIKMRVWERGAGETMACGTGACAAVVAGVLNGYTGRRVTVHLKAGDLFIEW-PEGKHVYMSGPAEEVFSG 274
BLAST of CB322179 vs. ExPASy Swiss-Prot
Match: DAPF_BACFR (Diaminopimelate epimerase OS=Bacteroides fragilis GN=dapF PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 2.070e-16 Identity = 43/105 (40.95%), Postives = 55/105 (52.38%), Query Frame = -3 Query: 79 LNLAEIGPKFEHHSVFPARTNTEFVEIISPSQLKMRVWERXXXXXXXXXXXXXXXXXXXVLEGHAERRCTVDLPGGPLDIEWKEEDNHVYMTGPAEVVFYGSVLL 393 +NL+E+GPK E H +FP RTN EF +I + ++MRVWER L G R V + GG L IEW E H+ MTGPA VF G++ L Sbjct: 163 VNLSEMGPKLEKHPLFPDRTNVEFAQITGENTIRMRVWERGSGITQACGTGACATAVAAHLTGRTGRTVNVVMDGGTLTIEWDEATGHISMTGPAVKVFDGTIEL 267
BLAST of CB322179 vs. ExPASy Swiss-Prot
Match: DAPF_ALHEH (Diaminopimelate epimerase OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=dapF PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 4.612e-16 Identity = 41/109 (37.61%), Postives = 57/109 (52.29%), Query Frame = -3 Query: 76 VDKLNLAEIGPKFEHHSVFPARTNTEFVEIISPSQLKMRVWERXXXXXXXXXXXXXXXXXXXVLEGHAERRCTVDLPGGPLDIEWKEEDNHVYMTGPAEVVFYGSVLLN 402 VD + +GP E HS FP R N F+++++P+ +++RV+ER L G E VDLPGG L I W + HV+MTGPAE VF G + L+ Sbjct: 171 VDSAPVETLGPAIESHSRFPRRVNVGFMQVLTPTHIRLRVYERGAGETLACGTGACAAVVSGRLRGWLEEAVDVDLPGGRLVIHWAGDGEHVWMTGPAETVFEGEIRLD 279
BLAST of CB322179 vs. ExPASy Swiss-Prot
Match: DAPF_PARD8 (Diaminopimelate epimerase OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) GN=dapF PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.027e-15 Identity = 41/107 (38.32%), Postives = 59/107 (55.14%), Query Frame = -3 Query: 85 KVDKLNLAEIGPKFEHHSVFPARTNTEFVEIISPSQLKMRVWERXXXXXXXXXXXXXXXXXXXVLEGHAERRCTVDLPGGPLDIEWKEEDNHVYMTGPAEVVFYGSV 405 ++D++ LA +GP E +FP RTN EFV+++ P +++MRVWER V+ G +R+ V + GGPL IEW E V+MTG A VF G + Sbjct: 161 EMDQVGLASVGPLLECLPLFPDRTNVEFVQVLKPDEVRMRVWERGSGITQACGTGACATAVAGVVRGKTKRKTKVIMDGGPLTIEWDERSGKVFMTGGAVNVFEGFI 267
BLAST of CB322179 vs. ExPASy Swiss-Prot
Match: DAPF_CARHZ (Diaminopimelate epimerase OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=dapF PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.027e-15 Identity = 44/106 (41.51%), Postives = 58/106 (54.72%), Query Frame = -3 Query: 79 KLNLAEIGPKFEHHSVFPARTNTEFVEIISPSQLKMRVWERXXXXXXXXXXXXXXXXXXXVLEGHAERRCTVDLPGGPLDIEWKEEDNHVYMTGPAEVVFYGSVLL 396 K+ L + GP E H +FP +TN EFVEI+SP+++K+ VWER + GH + V LPGG L I W ++ VYMTGPAE+VF G L Sbjct: 170 KIELEKYGPLIETHPLFPRKTNVEFVEILSPAKVKVFVWERGAGATLACGTGASAVVVAGRILGHLQEDVEVVLPGGSLFINWVFGES-VYMTGPAEIVFKGEYFL 274
BLAST of CB322179 vs. ExPASy Swiss-Prot
Match: DAPF_MAGSM (Diaminopimelate epimerase OS=Magnetococcus sp. (strain MC-1) GN=dapF PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 1.752e-15 Identity = 43/102 (42.16%), Postives = 58/102 (56.86%), Query Frame = -3 Query: 82 LAEIGPKFEHHSVFPARTNTEFVEIISPSQLKMRVWERXXXXXXXXXXXXXXXXXXXVLEGHAERRCTVDLPGGPLDIEWKEEDNHVYMTGPAEVVFYGSVL 387 LA++GP EHH++FP R N E V+++S S+++MRVWER + +G ER CTV L GG L I W E D V M+GPA VF G ++ Sbjct: 172 LAKVGPLVEHHALFPNRINFEVVQVLSRSRIRMRVWERGAGITPACGTGACAAAVACMRQGWVERDCTVVLDGGELQIVWLESD-RVMMSGPATEVFRGELV 272
BLAST of CB322179 vs. ExPASy Swiss-Prot
Match: DAPF_GRABC (Diaminopimelate epimerase OS=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) GN=dapF PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 1.752e-15 Identity = 41/106 (38.68%), Postives = 56/106 (52.83%), Query Frame = -3 Query: 79 KLNLAEIGPKFEHHSVFPARTNTEFVEIISPSQLKMRVWERXXXXXXXXXXXXXXXXXXXVLEGHAERRCTVDLPGGPLDIEWKEEDNHVYMTGPAEVVFYGSVLL 396 +L++ GP E H +FP R N +++S S +++RVWER V G AER V+L GG L I W+E+D HV MTGPA VF+G + L Sbjct: 165 ELDIPVTGPLLERHPLFPERANIGHAQMLSRSHIRLRVWERGAGLTLACGTGACATLVNAVRRGLAEREAVVELDGGQLLIHWREQDGHVLMTGPAATVFHGRIAL 270 The following BLAST results are available for this feature:
BLAST of CB322179 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 204
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CB322179 ID=CB322179; Name=CB322179; organism=Citrus sinensis; type=EST; length=425bpback to top |