CB322212

Overview
NameCB322212
Unique NameCB322212
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length552
Libraries
Library NameType
Mature leaf blade cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB322212 vs. ExPASy Swiss-Prot
Match: THI4_METMJ (Putative thiazole biosynthetic enzyme OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=Memar_2251 PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.181e-17
Identity = 52/143 (36.36%), Postives = 77/143 (53.85%), Query Frame = 3
Query:   87 VKLFNAVAAEDLIVKG-GRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATGVKRLKSIGMIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGQ 512
            V+ FN    ED++++G GR+GG+V NW  V M       +DP  M     V + GHD    A   + ++  G   +V G   +    AE  I+  T+E+ PG+ VTGM    + G  RMGP FG M++SG++AA L  + LG+
Sbjct:  119 VEFFNLTTVEDVMIRGDGRIGGLVVNWTPVDM---AGLHVDPLTMACTCTVDATGHD----AMIARMVEKKGGALTVKGESFMWAERAESQILAHTKEVFPGLFVTGMAANAVAGECRMGPIFGGMLLSGERAAELVAERLGR 254          
BLAST of CB322212 vs. ExPASy Swiss-Prot
Match: THI4_METS5 (Putative thiazole biosynthetic enzyme OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=Msed_2221 PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 2.848e-17
Identity = 54/158 (34.18%), Postives = 80/158 (50.63%), Query Frame = 3
Query:   48 TSTIMSKLLARP---NVKLFNAVAAEDLIVKGG--RVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATGVKRLKSIGMIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKAL 506
            +S  M+KL A       K+ + V  +D+I +    RV GV   W    M       +DP  + AK VV + GHD    +   +++  +G++  +PG K+     AE   V  + E+ PG+   GM V EI   PRMGP FGAM++SG+K A   +K L
Sbjct:  106 SSEFMAKLAAATIDAGAKIIHGVTVDDVIFRENPLRVTGVAVEWTATQM---ASLHVDPLFISAKAVVDATGHDAEVISVASRKIPELGIV--IPGEKSAYSEIAEQLTVEQSGEVAPGLYAAGMAVTEIKAIPRMGPIFGAMLLSGKKVAEDIIKNL 258          
BLAST of CB322212 vs. ExPASy Swiss-Prot
Match: THI4_SULAC (Putative thiazole biosynthetic enzyme OS=Sulfolobus acidocaldarius GN=Saci_0854 PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 3.720e-17
Identity = 53/158 (33.54%), Postives = 81/158 (51.27%), Query Frame = 3
Query:   48 TSTIMSKLLARP---NVKLFNAVAAEDLIVKGG--RVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATGVKRLKSIGMIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKAL 506
            ++  M+KL A       K+ + V  +D+I +    RV GV   W    M       +DP  + AK VV + GHD    A   +++  +G++  +PG ++     AE   V  T  + PG+ V GM V E+ G PRMGP FG+M++SG+K A   +K L
Sbjct:  110 SAEFMAKLAASAIDAGAKIIHGVTVDDVIFRENPLRVAGVAVEWTATQM---AGLHVDPVFISAKAVVDATGHDAEVVAVASRKIPELGIV--IPGERSAYSEMAEKLTVEQTGVVAPGLYVAGMSVTEVRGLPRMGPIFGSMVLSGKKVAEDIIKDL 262          
BLAST of CB322212 vs. ExPASy Swiss-Prot
Match: THI4_PYRAR (Putative thiazole biosynthetic enzyme OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=Pars_1498 PE=3 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 3.720e-17
Identity = 49/143 (34.27%), Postives = 78/143 (54.55%), Query Frame = 3
Query:   90 KLFNAVAAEDLIVKGG--RVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATGVKRLKSIGMIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGQ 512
            K+   V  +D+I +G   RV G++  W  + M+      +DP    AK V+ + GHD    +   +++  +G+   +PG K+     +E  +V  T ++ PG+ VTGM VA + G PRMGP FG MM+SG+K A +  K L +
Sbjct:  117 KIILGVHVDDVIFRGDPPRVAGLLWIWTPIQMSG---MHVDPLYTMAKAVIDATGHDAEVISVAARKVPELGI--QLPGEKSAWSEVSEKLVVEYTGKVAPGLYVTGMAVAAVHGLPRMGPIFGGMMLSGKKIAEIVAKDLAE 254          
BLAST of CB322212 vs. ExPASy Swiss-Prot
Match: THI4_SULTO (Putative thiazole biosynthetic enzyme OS=Sulfolobus tokodaii GN=ST0361 PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 4.858e-17
Identity = 51/158 (32.28%), Postives = 82/158 (51.90%), Query Frame = 3
Query:   48 TSTIMSKLLARP---NVKLFNAVAAEDLIVKGG--RVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATGVKRLKSIGMIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKAL 506
            ++  M+KL A       K+ + V  +D+I +    +V GV   W    M       +DP  + AK VV + GHD    +   +++  + ++  +PG K+    TAE+  V  T  + PG+   GM V E+ G PRMGP FGAM++SG++ A + +K L
Sbjct:  111 SAEFMAKLAASAIDAGAKIIHGVTVDDVIFRENPLKVVGVAVEWTATQM---AGLHVDPLFISAKAVVDATGHDAEVISVAARKIPELNIV--IPGEKSAYSETAEELTVENTGMVAPGLYAAGMAVTEVKGLPRMGPIFGAMVLSGKRVAEIIIKDL 263          
BLAST of CB322212 vs. ExPASy Swiss-Prot
Match: THI4_METBF (Putative thiazole biosynthetic enzyme OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=Mbar_A2100 PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 4.858e-17
Identity = 51/142 (35.92%), Postives = 84/142 (59.15%), Query Frame = 3
Query:   90 KLFNAVAAEDLIVK-GGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATGVKRLKS--IGMIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKAL 506
            ++FN V+ ED++++   RV G+V NW  V++    +  +DP ++  K+V+   GH+     T ++++ +  IG +  + G K +     E  +V  T+EI PG+IV GM       +PRMGP FG M++SG+KAA LAL+ L
Sbjct:  120 EVFNLVSFEDVMIRENDRVTGIVVNWGPVTVQ---RLHVDPLMIRTKLVIDGTGHEAVVCNTILRKIPNAKIGNLGKL-GEKPMWSEVGEQLVVDATKEIYPGLIVAGMAANAATCSPRMGPVFGGMLLSGEKAAKLALEKL 257          
BLAST of CB322212 vs. ExPASy Swiss-Prot
Match: THI4_THEMA (Putative thiazole biosynthetic enzyme OS=Thermotoga maritima GN=TM_0787 PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 8.287e-17
Identity = 54/139 (38.85%), Postives = 76/139 (54.68%), Query Frame = 3
Query:   93 LFNAVAAEDLIVKGGRVGGVVTNWA-LVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATGVKRLKSIGMIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKAL 506
            +FN V+ ED+ V+ GRV GVV NW   V +       +DP  ++A  VV   GH     A  V  L   G+++       +D + AE  +V  T EI PG++V+GM V  + G PRMGP FG M++SGQK A +  + L
Sbjct:  120 VFNNVSVEDVAVQNGRVCGVVVNWGPTVRLGLH----VDPITVKASFVVDGTGHP----ANVVSLLAKRGLVEMKTEFP-MDADEAEKFVVDNTGEIFPGLLVSGMAVCAVHGGPRMGPIFGGMILSGQKVARIVSERL 249          
BLAST of CB322212 vs. ExPASy Swiss-Prot
Match: THI4_METMA (Putative thiazole biosynthetic enzyme OS=Methanosarcina mazei GN=MM_0222 PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.414e-16
Identity = 51/141 (36.17%), Postives = 80/141 (56.74%), Query Frame = 3
Query:   90 KLFNAVAAEDLIVK-GGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATGVKRLKSIGMID-SVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKAL 506
            ++FN V+ ED++++   RV G+V NW  V+     +  +DP ++  K+V+   GHD     T ++++ +  + +  + G K +     E   V  T+EI PG+IV GM       APRMGP FG M++SG+KAA LAL  L
Sbjct:  120 EVFNLVSFEDIMIRENDRVTGIVINWGPVTTQ---RLHVDPLMIRTKLVIDGTGHDAVVCNTILRKIPNAKIGEFGILGEKPMWSEVGERLAVDATQEIYPGLIVAGMAANAATRAPRMGPVFGGMLLSGEKAAKLALDRL 257          
BLAST of CB322212 vs. ExPASy Swiss-Prot
Match: THI4_METAC (Putative thiazole biosynthetic enzyme OS=Methanosarcina acetivorans GN=MA_2851 PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 3.149e-16
Identity = 52/142 (36.62%), Postives = 81/142 (57.04%), Query Frame = 3
Query:   90 KLFNAVAAEDLIVK-GGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATGVKRLKS--IGMIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKAL 506
            ++FN V+ ED++++   RV G+V NW  V+     +  +DP ++  K+V+   GH+     T ++++ +  IG +  + G K +     E   V  T+EI PG+IV GM       APRMGP FG M++SG+KAA LAL  L
Sbjct:  120 EVFNLVSFEDIMIRENDRVTGIVINWGPVTTQ---RLHVDPLMIRTKLVIDGTGHEAVVCNTILRKIPNAKIGELGLL-GEKPMWSEVGERLAVNATQEIYPGLIVAGMAANAATRAPRMGPVFGGMLLSGEKAAKLALDRL 257          
BLAST of CB322212 vs. ExPASy Swiss-Prot
Match: THI4_METTH (Putative thiazole biosynthetic enzyme OS=Methanobacterium thermoautotrophicum GN=MTH_1620 PE=3 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 4.113e-16
Identity = 47/155 (30.32%), Postives = 87/155 (56.13%), Query Frame = 3
Query:   48 TSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATGVKRL-KSIGMIDS-VPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKAL 506
            TST+ S+   +  +K+FN ++ ED++++   + G+V NW+ V M       +DP  + A+ V+ + GHD        +++   +   D  + G +++  +  E A++  TRE+ P + V GM    + GAPRMGP FG M++SG++ A + ++ L
Sbjct:  107 TSTLCSRA-CQAGLKIFNLMSIEDVMIRDEGITGLVLNWSSVEM---AGLHVDPLTVRARAVIDATGHDCEIVKVVERKIGPELNTPDGRIQGERSMWADVGEAALIENTREVYPNLYVAGMASNAVYGAPRMGPIFGGMLVSGRRVAEMIIEKL 257          
The following BLAST results are available for this feature:
BLAST of CB322212 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
THI4_METMJ2.181e-1736.36Putative thiazole biosynthetic enzyme OS=Methanocu... [more]
THI4_METS52.848e-1734.18Putative thiazole biosynthetic enzyme OS=Metallosp... [more]
THI4_SULAC3.720e-1733.54Putative thiazole biosynthetic enzyme OS=Sulfolobu... [more]
THI4_PYRAR3.720e-1734.27Putative thiazole biosynthetic enzyme OS=Pyrobacul... [more]
THI4_SULTO4.858e-1732.28Putative thiazole biosynthetic enzyme OS=Sulfolobu... [more]
THI4_METBF4.858e-1735.92Putative thiazole biosynthetic enzyme OS=Methanosa... [more]
THI4_THEMA8.287e-1738.85Putative thiazole biosynthetic enzyme OS=Thermotog... [more]
THI4_METMA1.414e-1636.17Putative thiazole biosynthetic enzyme OS=Methanosa... [more]
THI4_METAC3.149e-1636.62Putative thiazole biosynthetic enzyme OS=Methanosa... [more]
THI4_METTH4.113e-1630.32Putative thiazole biosynthetic enzyme OS=Methanoba... [more]

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Properties
Property NameValue
Genbank descriptionEST0336 Mature leaf blade cDNA subtraction library Citrus sinensis cDNA clone 24LB352 similar to thiamin biosynthesis protein thi1 (acc# T10474), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB322212 ID=CB322212; Name=CB322212; organism=Citrus sinensis; type=EST; length=552bp
ACGACGAGCAAGACAACTACGTCGTGATCAAGCACGCCGCGTTGTTCACT
TCAACAATCATGAGCAAGCTGTTGGCGAGGCCAAACGTGAAGTTGTTCAA
CGCTGTTGCAGCTGAGGATTTGATCGTCAAGGGAGGGAGAGTAGGTGGCG
TCGTCACAAACTGGGCCTTGGTGTCTATGAATCACGACACACAGTCTTGC
ATGGACCCCAATGTGATGGAGGCCAAGATTGTGGTCAGCTCGTGTGGCCA
TGACGGCCCTTTTGGGGCTACCGGTGTTAAGAGGCTTAAGAGTATTGGCA
TGATTGACTCCGTCCCCGGAATGAAGGCTCTCGATATGAACACTGCAGAG
GATGCTATCGTTAGGCTTACCAGGGAGATCGTGCCTGGCATGATTGTCAC
GGGCATGGAAGTCGCAGAGATCGACGGTGCCCCTAGAATGGGACCTACAT
TCGGGGCCATGATGATTTCAGGGCAGAAGGCAGCCCATTTGGCGTTGAAG
GCATTGGGGCAGCCGAATGCGATAGATGGGACATTCAGTGAAGTTACGGA
AG
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