CB322223

Overview
NameCB322223
Unique NameCB322223
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length410
Libraries
Library NameType
Mature leaf blade cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB322223 vs. ExPASy Swiss-Prot
Match: UCP2_PONAB (Mitochondrial uncoupling protein 2 OS=Pongo abelii GN=UCP2 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.500e-14
Identity = 42/106 (39.62%), Postives = 58/106 (54.72%), Query Frame = 3
Query:    3 DQVKEMILKKGVMRDGLGTHVTXXXXXXXXXXXXXNPVDVIKTRVMNMTVEAGRDPPYKGALDCALKTVRAEGPMALYKGFIPTISRQGPFTVVLFVTLEQVRKLL 320
            D +K+ +LK  +M D L  H T             +PVDV+KTR MN  +       Y  A  CAL  ++ EGP A YKGF+P+  R G + VV+FVT EQ+++ L
Sbjct:  198 DLIKDALLKANLMTDDLPCHFTSAFGAGFCTTVIASPVDVVKTRYMNSALGQ-----YSSAGHCALTMLQKEGPRAFYKGFMPSFLRLGSWNVVMFVTYEQLKRAL 298          
BLAST of CB322223 vs. ExPASy Swiss-Prot
Match: UCP2_HUMAN (Mitochondrial uncoupling protein 2 OS=Homo sapiens GN=UCP2 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.500e-14
Identity = 42/106 (39.62%), Postives = 58/106 (54.72%), Query Frame = 3
Query:    3 DQVKEMILKKGVMRDGLGTHVTXXXXXXXXXXXXXNPVDVIKTRVMNMTVEAGRDPPYKGALDCALKTVRAEGPMALYKGFIPTISRQGPFTVVLFVTLEQVRKLL 320
            D +K+ +LK  +M D L  H T             +PVDV+KTR MN  +       Y  A  CAL  ++ EGP A YKGF+P+  R G + VV+FVT EQ+++ L
Sbjct:  198 DLIKDALLKANLMTDDLPCHFTSAFGAGFCTTVIASPVDVVKTRYMNSALGQ-----YSSAGHCALTMLQKEGPRAFYKGFMPSFLRLGSWNVVMFVTYEQLKRAL 298          
BLAST of CB322223 vs. ExPASy Swiss-Prot
Match: UCP2_CANFA (Mitochondrial uncoupling protein 2 OS=Canis familiaris GN=UCP2 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.500e-14
Identity = 42/106 (39.62%), Postives = 58/106 (54.72%), Query Frame = 3
Query:    3 DQVKEMILKKGVMRDGLGTHVTXXXXXXXXXXXXXNPVDVIKTRVMNMTVEAGRDPPYKGALDCALKTVRAEGPMALYKGFIPTISRQGPFTVVLFVTLEQVRKLL 320
            D +K+ +LK  +M D L  H T             +PVDV+KTR MN  +       Y  A  CAL  ++ EGP A YKGF+P+  R G + VV+FVT EQ+++ L
Sbjct:  198 DLIKDALLKANLMTDDLPCHFTSAFGAGFCTTVIASPVDVVKTRYMNSALGQ-----YSSAGHCALTMLQKEGPRAFYKGFMPSFLRLGSWNVVMFVTYEQLKRAL 298          
BLAST of CB322223 vs. ExPASy Swiss-Prot
Match: UCP5_MOUSE (Brain mitochondrial carrier protein 1 OS=Mus musculus GN=Slc25a14 PE=2 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 3.265e-14
Identity = 40/105 (38.10%), Postives = 57/105 (54.29%), Query Frame = 3
Query:    3 DQVKEMILKKGVMRDGLGTHVTXXXXXXXXXXXXXNPVDVIKTRVMNMTVEAGRDPPYKGALDCALKTVRAEGPMALYKGFIPTISRQGPFTVVLFVTLEQVRKL 317
            D  K+ ++  G++ D + TH               NPVDV++TR+MN     G    YKG LD  LK  + EG  ALYKGF P   R GP+ ++ F+T EQ+++L
Sbjct:  219 DITKKHLIVSGMLGDTILTHFVSSFTCGLAGALASNPVDVVRTRMMNQRAIVGHVDLYKGTLDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIFFITYEQLKRL 323          
BLAST of CB322223 vs. ExPASy Swiss-Prot
Match: UCP5_HUMAN (Brain mitochondrial carrier protein 1 OS=Homo sapiens GN=SLC25A14 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 3.265e-14
Identity = 40/105 (38.10%), Postives = 57/105 (54.29%), Query Frame = 3
Query:    3 DQVKEMILKKGVMRDGLGTHVTXXXXXXXXXXXXXNPVDVIKTRVMNMTVEAGRDPPYKGALDCALKTVRAEGPMALYKGFIPTISRQGPFTVVLFVTLEQVRKL 317
            D  K+ ++  G+M D + TH               NPVDV++TR+MN     G    YKG +D  LK  + EG  ALYKGF P   R GP+ ++ F+T EQ+++L
Sbjct:  219 DITKKHLILSGMMGDTILTHFVSSFTCGLAGALASNPVDVVRTRMMNQRAIVGHVDLYKGTVDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIFFITYEQLKRL 323          
BLAST of CB322223 vs. ExPASy Swiss-Prot
Match: UCP2_CYPCA (Mitochondrial uncoupling protein 2 OS=Cyprinus carpio GN=ucp2 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 3.265e-14
Identity = 41/106 (38.68%), Postives = 58/106 (54.72%), Query Frame = 3
Query:    3 DQVKEMILKKGVMRDGLGTHVTXXXXXXXXXXXXXNPVDVIKTRVMNMTVEAGRDPPYKGALDCALKTVRAEGPMALYKGFIPTISRQGPFTVVLFVTLEQVRKLL 320
            D +K+ +LK  +M D L  H T             +PVDV+KTR MN          Y  AL+CA+  +  EGP A YKGF+P+  R G + VV+FVT EQ+++ +
Sbjct:  199 DLIKDALLKSSLMTDDLPCHFTSAFGAGFCTTVIASPVDVVKTRYMNSA-----PGQYCSALNCAVAMLTKEGPKAFYKGFMPSFLRLGSWNVVMFVTYEQLKRAM 299          
BLAST of CB322223 vs. ExPASy Swiss-Prot
Match: UCP2_BOVIN (Mitochondrial uncoupling protein 2 OS=Bos taurus GN=UCP2 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 3.265e-14
Identity = 42/106 (39.62%), Postives = 58/106 (54.72%), Query Frame = 3
Query:    3 DQVKEMILKKGVMRDGLGTHVTXXXXXXXXXXXXXNPVDVIKTRVMNMTVEAGRDPPYKGALDCALKTVRAEGPMALYKGFIPTISRQGPFTVVLFVTLEQVRKLL 320
            D +K+ +LK  +M D L  H T             +PVDV+KTR MN  +       Y  A  CAL  ++ EGP A YKGF+P+  R G + VV+FVT EQ+++ L
Sbjct:  198 DLIKDTLLKAHLMTDDLPCHFTSAFGAGFCTTVIASPVDVVKTRYMNSALGQ-----YSSAGHCALTMLQKEGPQAFYKGFMPSFLRLGSWNVVMFVTYEQLKRAL 298          
BLAST of CB322223 vs. ExPASy Swiss-Prot
Match: M2OM_MOUSE (Mitochondrial 2-oxoglutarate/malate carrier protein OS=Mus musculus GN=Slc25a11 PE=1 SV=3)

HSP 1 Score: 76.6406 bits (187), Expect = 4.265e-14
Identity = 42/106 (39.62%), Postives = 56/106 (52.83%), Query Frame = 3
Query:    6 QVKEMILKKGVMRDGLGTHVTXXXXXXXXXXXXXNPVDVIKTRVMNMTVEAGRDPPYKGALDCALKTVRAEGPMALYKGFIPTISRQGPFTVVLFVTLEQVRKLLK 323
            Q K+ +L  G   D +  H                PVD++KTR+ NM +  G+ P YK  LD  LK VR EG  +L+KGF P  +R GP TV+ F+ LEQ+ K  K
Sbjct:  204 QSKQFLLDSGYFSDNILCHFCASMISGLVTTAASMPVDIVKTRIQNMRMIDGK-PEYKNGLDVLLKVVRYEGFFSLWKGFTPYYARLGPHTVLTFIFLEQMNKAYK 308          
BLAST of CB322223 vs. ExPASy Swiss-Prot
Match: UCP3_PIG (Mitochondrial uncoupling protein 3 OS=Sus scrofa GN=UCP3 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 5.570e-14
Identity = 43/108 (39.81%), Postives = 57/108 (52.78%), Query Frame = 3
Query:    3 DQVKEMILKKGVMRDGLGTHVTXXXXXXXXXXXXXNPVDVIKTRVMNMTVEAGRDPP--YKGALDCALKTVRAEGPMALYKGFIPTISRQGPFTVVLFVTLEQVRKLL 320
            D +KE +L   ++ D L  H               +PVDV+KTR MN        PP  Y+  LDC LK V  EGP A YKGF P+  R G + VV+FV+ EQ+++ L
Sbjct:  197 DVIKEKVLDYHLLTDNLPCHFVSAFGAGFCATVVASPVDVVKTRYMN-------SPPGQYQNPLDCMLKMVTQEGPTAFYKGFTPSFLRLGSWNVVMFVSYEQLKRAL 297          
BLAST of CB322223 vs. ExPASy Swiss-Prot
Match: UCP2_PIG (Mitochondrial uncoupling protein 2 OS=Sus scrofa GN=UCP2 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 9.501e-14
Identity = 42/106 (39.62%), Postives = 56/106 (52.83%), Query Frame = 3
Query:    3 DQVKEMILKKGVMRDGLGTHVTXXXXXXXXXXXXXNPVDVIKTRVMNMTVEAGRDPPYKGALDCALKTVRAEGPMALYKGFIPTISRQGPFTVVLFVTLEQVRKLL 320
            D +K+ +LK  +M D L  H T             +PVDV+KTR MN          Y  A  CAL  ++ EGP A YKGF P+  R G + VV+FVT EQ+++ L
Sbjct:  198 DLIKDTLLKADLMTDDLPCHFTSAFGAGFCTTVIASPVDVVKTRYMNSA-----PGQYSSAGHCALTMLQKEGPRAFYKGFTPSFLRLGSWNVVMFVTYEQLKRAL 298          
The following BLAST results are available for this feature:
BLAST of CB322223 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
UCP2_PONAB2.500e-1439.62Mitochondrial uncoupling protein 2 OS=Pongo abelii... [more]
UCP2_HUMAN2.500e-1439.62Mitochondrial uncoupling protein 2 OS=Homo sapiens... [more]
UCP2_CANFA2.500e-1439.62Mitochondrial uncoupling protein 2 OS=Canis famili... [more]
UCP5_MOUSE3.265e-1438.10Brain mitochondrial carrier protein 1 OS=Mus muscu... [more]
UCP5_HUMAN3.265e-1438.10Brain mitochondrial carrier protein 1 OS=Homo sapi... [more]
UCP2_CYPCA3.265e-1438.68Mitochondrial uncoupling protein 2 OS=Cyprinus car... [more]
UCP2_BOVIN3.265e-1439.62Mitochondrial uncoupling protein 2 OS=Bos taurus G... [more]
M2OM_MOUSE4.265e-1439.62Mitochondrial 2-oxoglutarate/malate carrier protei... [more]
UCP3_PIG5.570e-1439.81Mitochondrial uncoupling protein 3 OS=Sus scrofa G... [more]
UCP2_PIG9.501e-1439.62Mitochondrial uncoupling protein 2 OS=Sus scrofa G... [more]

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Properties
Property NameValue
Genbank descriptionEST0348 Mature leaf blade cDNA subtraction library Citrus sinensis cDNA clone 24LB364 similar to mitochondrial dicarboxylate carrier protein (acc# AAM63236), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB322223 ID=CB322223; Name=CB322223; organism=Citrus sinensis; type=EST; length=410bp
ACGATCAGGTGAAGGAGATGATTCTGAAGAAGGGGGTGATGAGGGACGGA
CTGGGGACGCACGTGACGGCGAGTTTTGCGGCGGGGTTTGTGGCGTCGGT
GGCGTCGAATCCGGTGGACGTGATTAAGACGAGGGTCATGAATATGACCG
TTGAGGCTGGGAGGGACCCACCGTATAAGGGGGCCTTAGATTGCGCGTTG
AAGACAGTGAGAGCTGAAGGGCCCATGGCCCTTTATAAAGGGTTCATTCC
AACCATTTCGAGGCAGGGCCCTTTCACTGTAGTGTTGTTTGTGACATTAG
AGCAAGTGAGGAAGCTGCTCAAAGAGTTTTGATTATTTTCGGACGATGAT
AATAAAGTTAAAACGAGGCAAATTTAATGTTATTATTGTAACTGTTAGCA
GTTGTTTCGG
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