CB322223

Overview
NameCB322223
Unique NameCB322223
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length410
Libraries
Library NameType
Mature leaf blade cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB322223 vs. ExPASy Swiss-Prot
Match: UCP2_DANRE (Mitochondrial uncoupling protein 2 OS=Danio rerio GN=ucp2 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 9.501e-14
Identity = 39/106 (36.79%), Postives = 58/106 (54.72%), Query Frame = 3
Query:    3 DQVKEMILKKGVMRDGLGTHVTXXXXXXXXXXXXXNPVDVIKTRVMNMTVEAGRDPPYKGALDCALKTVRAEGPMALYKGFIPTISRQGPFTVVLFVTLEQVRKLL 320
            D +K+ +LK  +M D L  H T             +PVDV+KTR MN          Y  AL+CA+  +  +GP A +KGF+P+  R G + VV+FVT EQ+++ +
Sbjct:  199 DLIKDALLKSSLMTDDLPCHFTSAFGAGFCTTIIASPVDVVKTRYMNSA-----QGQYSSALNCAVAMLTKKGPKAFFKGFMPSFLRLGSWNVVMFVTYEQLKRAM 299          
BLAST of CB322223 vs. ExPASy Swiss-Prot
Match: M2OM_BOVIN (Mitochondrial 2-oxoglutarate/malate carrier protein OS=Bos taurus GN=SLC25A11 PE=1 SV=3)

HSP 1 Score: 75.485 bits (184), Expect = 9.501e-14
Identity = 41/106 (38.68%), Postives = 56/106 (52.83%), Query Frame = 3
Query:    6 QVKEMILKKGVMRDGLGTHVTXXXXXXXXXXXXXNPVDVIKTRVMNMTVEAGRDPPYKGALDCALKTVRAEGPMALYKGFIPTISRQGPFTVVLFVTLEQVRKLLK 323
            Q K+ +L  G   D +  H                PVD++KTR+ NM +  G+ P YK  LD  +K VR EG  +L+KGF P  +R GP TV+ F+ LEQ+ K  K
Sbjct:  204 QSKQFLLDSGYFSDNILCHFCASMISGLVTTAASMPVDIVKTRIQNMRMIDGK-PEYKNGLDVLVKVVRYEGFFSLWKGFTPYYARLGPHTVLTFIFLEQMNKAYK 308          
BLAST of CB322223 vs. ExPASy Swiss-Prot
Match: UCP3_MOUSE (Mitochondrial uncoupling protein 3 OS=Mus musculus GN=Ucp3 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.117e-13
Identity = 41/106 (38.68%), Postives = 57/106 (53.77%), Query Frame = 3
Query:    3 DQVKEMILKKGVMRDGLGTHVTXXXXXXXXXXXXXNPVDVIKTRVMNMTVEAGRDPPYKGALDCALKTVRAEGPMALYKGFIPTISRQGPFTVVLFVTLEQVRKLL 320
            D +KE +L+  +  D    H               +PVDV+KTR MN  +  GR   Y+  L C LK V  EGP A YKGF+P+  R G + V++FVT EQ+++ L
Sbjct:  197 DIIKEKLLESHLFTDNFPCHFVSAFGAGFCATVVASPVDVVKTRYMNAPL--GR---YRSPLHCMLKMVAQEGPTAFYKGFVPSFLRLGAWNVMMFVTYEQLKRAL 297          
BLAST of CB322223 vs. ExPASy Swiss-Prot
Match: UCP3_CANFA (Mitochondrial uncoupling protein 3 OS=Canis familiaris GN=UCP3 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.117e-13
Identity = 43/108 (39.81%), Postives = 56/108 (51.85%), Query Frame = 3
Query:    3 DQVKEMILKKGVMRDGLGTHVTXXXXXXXXXXXXXNPVDVIKTRVMNMTVEAGRDPP--YKGALDCALKTVRAEGPMALYKGFIPTISRQGPFTVVLFVTLEQVRKLL 320
            D +KE +L   ++ D    H+              +PVDV+KTR MN        PP  Y   LDC LK V  EGP A YKGF P+  R G + VV+FVT EQ+++ L
Sbjct:  200 DIIKEKLLDYHLLTDNFPCHLISAFGAGFCATVVASPVDVVKTRYMN-------SPPGQYCSPLDCMLKMVTQEGPTAFYKGFTPSFLRLGTWNVVMFVTYEQLKRAL 300          
BLAST of CB322223 vs. ExPASy Swiss-Prot
Match: M2OM_RAT (Mitochondrial 2-oxoglutarate/malate carrier protein OS=Rattus norvegicus GN=Slc25a11 PE=2 SV=3)

HSP 1 Score: 74.3294 bits (181), Expect = 2.117e-13
Identity = 41/106 (38.68%), Postives = 54/106 (50.94%), Query Frame = 3
Query:    6 QVKEMILKKGVMRDGLGTHVTXXXXXXXXXXXXXNPVDVIKTRVMNMTVEAGRDPPYKGALDCALKTVRAEGPMALYKGFIPTISRQGPFTVVLFVTLEQVRKLLK 323
            Q K+ +L  G   D +  H                PVD++KTR+ NM +     P YK  LD  LK VR EG  +L+KGF P  +R GP TV+ F+ LEQ+ K  K
Sbjct:  204 QSKQFLLDSGYFSDNILCHFCAIMISGLVTTAASMPVDIVKTRIQNMRM-IDEKPEYKNGLDVLLKVVRYEGFFSLWKGFTPYYARLGPHTVLTFIFLEQMNKAYK 308          
BLAST of CB322223 vs. ExPASy Swiss-Prot
Match: UCP3_BOVIN (Mitochondrial uncoupling protein 3 OS=Bos taurus GN=UCP3 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.764e-13
Identity = 43/116 (37.07%), Postives = 57/116 (49.14%), Query Frame = 3
Query:    3 DQVKEMILKKGVMRDGLGTHVTXXXXXXXXXXXXXNPVDVIKTRVMNMTVEAGRDPP--YKGALDCALKTVRAEGPMALYKGFIPTISRQGPFTVVLFVTLEQVRKLLKEF*LFSD 344
            D +KE +L   ++ D    H               +PVDV+KTR MN        PP  Y    DC LK V  EGP A YKGF P+  R G + VV+FVT EQ+++ L +  +  D
Sbjct:  200 DIIKEKLLDYHLLTDNFPCHFVSAFGAGFCATLVASPVDVVKTRYMN-------SPPGQYHSPFDCMLKMVTQEGPTAFYKGFTPSFLRLGSWNVVMFVTYEQMKRALMKVQMLRD 308          
BLAST of CB322223 vs. ExPASy Swiss-Prot
Match: M2OM_HUMAN (Mitochondrial 2-oxoglutarate/malate carrier protein OS=Homo sapiens GN=SLC25A11 PE=1 SV=3)

HSP 1 Score: 73.559 bits (179), Expect = 3.610e-13
Identity = 41/106 (38.68%), Postives = 54/106 (50.94%), Query Frame = 3
Query:    6 QVKEMILKKGVMRDGLGTHVTXXXXXXXXXXXXXNPVDVIKTRVMNMTVEAGRDPPYKGALDCALKTVRAEGPMALYKGFIPTISRQGPFTVVLFVTLEQVRKLLK 323
            Q K+ +L  G   D +  H                PVD+ KTR+ NM +  G+ P YK  LD   K VR EG  +L+KGF P  +R GP TV+ F+ LEQ+ K  K
Sbjct:  204 QSKQFLLDSGYFSDNILCHFCASMISGLVTTAASMPVDIAKTRIQNMRMIDGK-PEYKNGLDVLFKVVRYEGFFSLWKGFTPYYARLGPHTVLTFIFLEQMNKAYK 308          
BLAST of CB322223 vs. ExPASy Swiss-Prot
Match: UCP3_HUMAN (Mitochondrial uncoupling protein 3 OS=Homo sapiens GN=UCP3 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 8.043e-13
Identity = 42/108 (38.89%), Postives = 55/108 (50.93%), Query Frame = 3
Query:    3 DQVKEMILKKGVMRDGLGTHVTXXXXXXXXXXXXXNPVDVIKTRVMNMTVEAGRDPP--YKGALDCALKTVRAEGPMALYKGFIPTISRQGPFTVVLFVTLEQVRKLL 320
            D +KE +L   ++ D    H               +PVDV+KTR MN        PP  Y   LDC +K V  EGP A YKGF P+  R G + VV+FVT EQ+++ L
Sbjct:  201 DILKEKLLDYHLLTDNFPCHFVSAFGAGFCATVVASPVDVVKTRYMN-------SPPGQYFSPLDCMIKMVAQEGPTAFYKGFTPSFLRLGSWNVVMFVTYEQLKRAL 301          
BLAST of CB322223 vs. ExPASy Swiss-Prot
Match: OAC1_YEAST (Mitochondrial oxaloacetate transport protein OS=Saccharomyces cerevisiae GN=OAC1 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 8.043e-13
Identity = 39/103 (37.86%), Postives = 54/103 (52.43%), Query Frame = 3
Query:   12 KEMILKKGVMRDGLGTHVTXXXXXXXXXXXXXNPVDVIKTRVMNMTVEAGRDPPYKGALDCALKTVRAEGPMALYKGFIPTISRQGPFTVVLFVTLEQVRKLL 320
            K +++K  +M+DG   H+T             NP DVI TR+ N   +      YKG +DC +KTVR EG  ALYKGF   + R  P T++    +EQ  KL+
Sbjct:  216 KNILVKNDLMKDGPALHLTASTISGLGVAVVMNPWDVILTRIYNQKGDL-----YKGPIDCLVKTVRIEGVTALYKGFAAQVFRIAPHTIMCLTFMEQTMKLV 313          
BLAST of CB322223 vs. ExPASy Swiss-Prot
Match: DIC_HUMAN (Mitochondrial dicarboxylate carrier OS=Homo sapiens GN=SLC25A10 PE=1 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 8.043e-13
Identity = 40/104 (38.46%), Postives = 56/104 (53.85%), Query Frame = 3
Query:    3 DQVKEMILKKGVMRDGLGTHVTXXXXXXXXXXXXXNPVDVIKTRVMNMTVEAGRDPPYKGALDCALKTVRAEGPMALYKGFIPTISRQGPFTVVLFVTLEQVRK 314
            DQ K+++L  G + D + TH                P+DV+KTR+MN   E      Y+G   CA++T +  GP+A YKG +P   R  P TV+ FV LEQ+RK
Sbjct:  183 DQAKQLVLSTGYLSDNIFTHFVASFIAGGCATFLCQPLDVLKTRLMNSKGE------YQGVFHCAVETAKL-GPLAFYKGLVPAGIRLIPHTVLTFVFLEQLRK 279          
The following BLAST results are available for this feature:
BLAST of CB322223 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
UCP2_DANRE9.501e-1436.79Mitochondrial uncoupling protein 2 OS=Danio rerio ... [more]
M2OM_BOVIN9.501e-1438.68Mitochondrial 2-oxoglutarate/malate carrier protei... [more]
UCP3_MOUSE2.117e-1338.68Mitochondrial uncoupling protein 3 OS=Mus musculus... [more]
UCP3_CANFA2.117e-1339.81Mitochondrial uncoupling protein 3 OS=Canis famili... [more]
M2OM_RAT2.117e-1338.68Mitochondrial 2-oxoglutarate/malate carrier protei... [more]
UCP3_BOVIN2.764e-1337.07Mitochondrial uncoupling protein 3 OS=Bos taurus G... [more]
M2OM_HUMAN3.610e-1338.68Mitochondrial 2-oxoglutarate/malate carrier protei... [more]
UCP3_HUMAN8.043e-1338.89Mitochondrial uncoupling protein 3 OS=Homo sapiens... [more]
OAC1_YEAST8.043e-1337.86Mitochondrial oxaloacetate transport protein OS=Sa... [more]
DIC_HUMAN8.043e-1338.46Mitochondrial dicarboxylate carrier OS=Homo sapien... [more]

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Properties
Property NameValue
Genbank descriptionEST0348 Mature leaf blade cDNA subtraction library Citrus sinensis cDNA clone 24LB364 similar to mitochondrial dicarboxylate carrier protein (acc# AAM63236), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB322223 ID=CB322223; Name=CB322223; organism=Citrus sinensis; type=EST; length=410bp
ACGATCAGGTGAAGGAGATGATTCTGAAGAAGGGGGTGATGAGGGACGGA
CTGGGGACGCACGTGACGGCGAGTTTTGCGGCGGGGTTTGTGGCGTCGGT
GGCGTCGAATCCGGTGGACGTGATTAAGACGAGGGTCATGAATATGACCG
TTGAGGCTGGGAGGGACCCACCGTATAAGGGGGCCTTAGATTGCGCGTTG
AAGACAGTGAGAGCTGAAGGGCCCATGGCCCTTTATAAAGGGTTCATTCC
AACCATTTCGAGGCAGGGCCCTTTCACTGTAGTGTTGTTTGTGACATTAG
AGCAAGTGAGGAAGCTGCTCAAAGAGTTTTGATTATTTTCGGACGATGAT
AATAAAGTTAAAACGAGGCAAATTTAATGTTATTATTGTAACTGTTAGCA
GTTGTTTCGG
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