CB417302

Overview
NameCB417302
Unique NameCB417302
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length730
Libraries
Library NameType
Mature peel (flavedo) cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3579 contig Csv1_Contig3579:158..887. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB417302 vs. ExPASy Swiss-Prot
Match: HSP21_HELAN (17.9 kDa class II heat shock protein OS=Helianthus annuus GN=HSP17.9 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.592e-15
Identity = 45/114 (39.47%), Postives = 64/114 (56.14%), Query Frame = 2
Query:  203 EASAFVNTRVDWKETPEAHVFKADLPGLRXXXXXXXXXDDRALQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENAKMDRIKASMENGVLTVTVPKAEEAKKANVRAIQI 544
            +A A   T  D KE P ++VF  D+PGL+          D  L ISG+RN E+E +   + R+ER  G F ++F LPE+A  D+I A  ++GVLTVTV K    +    + IQ+
Sbjct:   44 DARAMAATPADVKECPNSYVFIVDMPGLKSGDIKVQVERDNVLVISGKRNREEEKEGVKYVRMERRMGKFMKKFALPEDANTDKISAICQDGVLTVTVEKLPPPEPKKPKTIQV 157          
BLAST of CB417302 vs. ExPASy Swiss-Prot
Match: SP21_STIAU (Spore protein SP21 OS=Stigmatella aurantiaca GN=hspA PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.633e-15
Identity = 40/98 (40.82%), Postives = 62/98 (63.27%), Query Frame = 2
Query:  239 KETPEAHVFKADLPGLRXXXXXXXXXDDRALQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENAKMDRIKASMENGVLTVTVPKAEEAKKANVR 532
            +ET EA++FKADLPG+           DR + +SG+R  EK ++S+ ++  ER+ G FSR F LPE    D ++A ++NGVLT+T+PK  E +   ++
Sbjct:   59 RETKEAYIFKADLPGVDEKDIEVTLTGDR-VSVSGKREREKREESERFYAYERTFGSFSRAFTLPEGVDGDNVRADLKNGVLTLTLPKRPEVQPKRIQ 155          
BLAST of CB417302 vs. ExPASy Swiss-Prot
Match: HS157_ARATH (15.7 kDa heat shock protein, peroxisomal OS=Arabidopsis thaliana GN=HSP15.7 PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.633e-15
Identity = 41/111 (36.94%), Postives = 62/111 (55.86%), Query Frame = 2
Query:  230 VDWKETPEAHVFKADLPGLRXXXXXXXXXDDRALQISGQRNIEKEDKSDTWHRVERSS-----GMFSRRFRLPENAKMDRIKASMENGVLTVTVPKAEEAKKANVRAIQIS 547
            +DW E+  +H+FK ++PG           +   L I G+   E++ ++  WH  ER +       F RR  LPEN K+D++KA +ENGVLTV VPK   +K + VR + I+
Sbjct:   24 IDWMESNNSHIFKINVPGYNKEDIKVQIEEGNVLSIRGEGIKEEKKENLVWHVAEREAFSGGGSEFLRRIELPENVKVDQVKAYVENGVLTVVVPKDTSSKSSKVRNVNIT 134          
BLAST of CB417302 vs. ExPASy Swiss-Prot
Match: HSP21_SOYBN (17.9 kDa class II heat shock protein OS=Glycine max GN=HSP17.9-D PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.032e-14
Identity = 44/114 (38.60%), Postives = 62/114 (54.39%), Query Frame = 2
Query:  203 EASAFVNTRVDWKETPEAHVFKADLPGLRXXXXXXXXXDDRALQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENAKMDRIKASMENGVLTVTVPKAEEAKKANVRAIQI 544
            +A A   T  D KE P ++VF+ D+PGL+         DD  L I G+R  ++E +   + R+ER  G   R+F LPENA  D I A  ++GVL+VTV K    +    R IQ+
Sbjct:   43 DAKAMAATPADVKEYPNSYVFEIDMPGLKSGDIKVQVEDDNLLLICGERKRDEEKEGAKYLRMERRVGKLMRKFVLPENANTDAISAVCQDGVLSVTVQKLPPPEPKKPRTIQV 156          
BLAST of CB417302 vs. ExPASy Swiss-Prot
Match: HSP22_MAIZE (17.8 kDa class II heat shock protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.761e-14
Identity = 42/114 (36.84%), Postives = 62/114 (54.39%), Query Frame = 2
Query:  203 EASAFVNTRVDWKETPEAHVFKADLPGLRXXXXXXXXXDDRALQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENAKMDRIKASMENGVLTVTVPKAEEAKKANVRAIQI 544
            +A A   T  D KE P A+ F  D+PGL          D+R L +SG+R  E+ +    + R+ER  G F R+F LP+NA +D++ A   +GVLTVTV K    +    + I++
Sbjct:   48 DARAMAATPADVKELPGAYAFVVDMPGLGTGDIRVQVEDERVLVVSGERRREEREDDAKYLRMERRMGKFMRKFVLPDNADVDKVAAVCRDGVLTVTVEKLPPPEPKKPKTIEV 161          
BLAST of CB417302 vs. ExPASy Swiss-Prot
Match: HSP21_PEA (17.1 kDa class II heat shock protein OS=Pisum sativum GN=HSP17.7 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.922e-14
Identity = 42/114 (36.84%), Postives = 63/114 (55.26%), Query Frame = 2
Query:  203 EASAFVNTRVDWKETPEAHVFKADLPGLRXXXXXXXXXDDRALQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENAKMDRIKASMENGVLTVTVPKAEEAKKANVRAIQI 544
            +A A   T  D KE P ++VF  D+PG++         D+  L ISG+R  E+E +   + ++ER  G   R+F LPENA ++ I A  ++GVLTVTV K    +    + IQ+
Sbjct:   36 DAKAMAATPADVKEHPNSYVFMVDMPGVKSGDIKVQVEDENVLLISGERKREEEKEGVKYLKMERRIGKLMRKFVLPENANIEAISAISQDGVLTVTVNKLPPPEPKKPKTIQV 149          
BLAST of CB417302 vs. ExPASy Swiss-Prot
Match: HSP21_MAIZE (17.5 kDa class II heat shock protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.922e-14
Identity = 45/114 (39.47%), Postives = 63/114 (55.26%), Query Frame = 2
Query:  203 EASAFVNTRVDWKETPEAHVFKADLPGLRXXXXXXXXXDDRALQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENAKMDRIKASMENGVLTVTVPKAEEAKKANVRAIQI 544
            +A A   T  D KE P A+ F  D+PGL          D+R L ISG+R  E+ + +  + R+ER  G F R+F LP+NA MD+I A   +GVLTVTV K    +    + I++
Sbjct:   46 DARAMAVTPADVKELPGAYAFVVDMPGLGTGDIKVQVEDERVLVISGERRREEREDAK-YLRMERRMGKFMRKFVLPDNADMDKISAVCRDGVLTVTVEKLPPPEPKKPKTIEV 158          
BLAST of CB417302 vs. ExPASy Swiss-Prot
Match: HSP22_IPONI (18.8 kDa class II heat shock protein OS=Ipomoea nil GN=SHSP-2 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.122e-14
Identity = 42/116 (36.21%), Postives = 65/116 (56.03%), Query Frame = 2
Query:  203 EASAFVNTRVDWKETPEAHVFKADLPGLRXXXXXXXXXDDRALQISGQRNIEKEDKSD--TWHRVERSSGMFSRRFRLPENAKMDRIKASMENGVLTVTVPKAEEAKKANVRAIQI 544
            +A A   T  D KE P ++VF AD+PG++         DD  L +SG+R   ++D+ D   + R+ER  G F R+F LPENA ++ I A  ++GVL VTV K    +    + +++
Sbjct:   49 DAKAMAATPADVKEYPNSYVFIADMPGVKAAEIKVQVEDDNVLVVSGERTEREKDEKDGVKYLRMERRVGKFMRKFVLPENANVEAINAVYQDGVLQVTVEKLPPPEPKKPKTVEV 164          
BLAST of CB417302 vs. ExPASy Swiss-Prot
Match: HS177_ARATH (17.7 kDa class II heat shock protein OS=Arabidopsis thaliana GN=HSP17.7 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.690e-14
Identity = 40/115 (34.78%), Postives = 67/115 (58.26%), Query Frame = 2
Query:  203 EASAFVNTRVDWKETPEAHVFKADLPGLRXXXXXXXXXDDRALQISGQRNIE-KEDKSDTWHRVERSSGMFSRRFRLPENAKMDRIKASMENGVLTVTVPKAEEAKKANVRAIQI 544
            +A A   T  D  E P+A+VF  D+PG++         ++  L +SG+R  + KE++   + R+ER  G F R+F+LP+NA +++I A+  +GVL VT+PK    +    + IQ+
Sbjct:   39 DAKAMAATPADVIEHPDAYVFAVDMPGIKGDEIQVQIENENVLVVSGKRQRDNKENEGVKFVRMERRMGKFMRKFQLPDNADLEKISAACNDGVLKVTIPKLPPPEPKKPKTIQV 153          
BLAST of CB417302 vs. ExPASy Swiss-Prot
Match: HS176_ARATH (17.6 kDa class II heat shock protein OS=Arabidopsis thaliana GN=HSP17.6 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.737e-14
Identity = 43/115 (37.39%), Postives = 63/115 (54.78%), Query Frame = 2
Query:  203 EASAFVNTRVDWKETPEAHVFKADLPGLRXXXXXXXXXDDRALQISGQRNIE-KEDKSDTWHRVERSSGMFSRRFRLPENAKMDRIKASMENGVLTVTVPKAEEAKKANVRAIQI 544
            +A A   T  D  E P A+ F  D+PG++         +D  L +SG+R  E KE++   + R+ER  G F R+F+LPENA +D+I A   +GVL VTV K    +    + IQ+
Sbjct:   38 DAKAMAATPADVIEHPNAYAFVVDMPGIKGDEIKVQVENDNVLVVSGERQRENKENEGVKYVRMERRMGKFMRKFQLPENADLDKISAVCHDGVLKVTVQKLPPPEPKKPKTIQV 152          
The following BLAST results are available for this feature:
BLAST of CB417302 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 57
Match NameE-valueIdentityDescription
HSP21_HELAN1.592e-1539.4717.9 kDa class II heat shock protein OS=Helianthus... [more]
SP21_STIAU4.633e-1540.82Spore protein SP21 OS=Stigmatella aurantiaca GN=hs... [more]
HS157_ARATH4.633e-1536.9415.7 kDa heat shock protein, peroxisomal OS=Arabid... [more]
HSP21_SOYBN1.032e-1438.6017.9 kDa class II heat shock protein OS=Glycine ma... [more]
HSP22_MAIZE1.761e-1436.8417.8 kDa class II heat shock protein OS=Zea mays P... [more]
HSP21_PEA3.922e-1436.8417.1 kDa class II heat shock protein OS=Pisum sati... [more]
HSP21_MAIZE3.922e-1439.4717.5 kDa class II heat shock protein OS=Zea mays P... [more]
HSP22_IPONI5.122e-1436.2118.8 kDa class II heat shock protein OS=Ipomoea ni... [more]
HS177_ARATH6.690e-1434.7817.7 kDa class II heat shock protein OS=Arabidopsi... [more]
HS176_ARATH8.737e-1437.3917.6 kDa class II heat shock protein OS=Arabidopsi... [more]

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Properties
Property NameValue
Genbank descriptionEST0377 Mature peel (flavedo) cDNA subtraction library Citrus sinensis cDNA clone 6P022 similar to small heat shock protein (acc# 1107298A), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB417302 ID=CB417302; Name=CB417302; organism=Citrus sinensis; type=EST; length=730bp
ACTTTTTATTAGTCGATAGAGGAAAGAGAGAGGGAAAACAAAAAAAGGAA
AGATAAGGAAAATGTCGCTGATTCCAAGCTTCTTCGGCAACCGACGCAGC
AGTGTGTTCGATCCGTTCTCACTCGACGTTTGGGATCCATTCAGGGACTT
CCCTCTCTCTGCTTCTTCTTTTCCATCTGCGGTGTCCTCTCAGTTCCCTG
GAGAAGCCTCTGCTTTCGTTAATACCCGCGTGGACTGGAAGGAAACCCCA
GAGGCCCACGTGTTCAAGGCTGATCTTCCGGGGCTAAGGAAAGAGGAGGT
GAAGGTCGAGGTTGAGGATGACAGGGCGCTTCAGATAAGCGGGCAGAGGA
ACATTGAGAAGGAAGACAAGAGCGACACGTGGCATCGCGTGGAGCGTAGC
AGTGGCATGTTCTCGAGGAGGTTCAGGCTGCCGGAGAATGCGAAGATGGA
CCGCATTAAGGCTTCAATGGAGAACGGTGTGCTTACTGTTACCGTTCCTA
AAGCGGAGGAGGCCAAGAAAGCTAATGTCAGGGCTATTCAAATCTCTGGC
TGACTAATTAATAAACAAAGACAATAAATAATTGTATGATAAGTTTTATG
GTTTGGTTTGGTCTATGTATCATGTGAAGTCTGTCTTTGTCTACTGAGAT
CGAGTGTCTTTGTTTGTAATGGGAATGTCAGAATGGGAATAATAATGTAA
TTTCGTAAAAAAAAAAAAAAAAAAAAAAAA
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