CB417303
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB417303 vs. ExPASy Swiss-Prot
Match: SYA_LEPCP (Alanyl-tRNA synthetase OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=alaS PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 1.060e-25 Identity = 56/100 (56.00%), Postives = 73/100 (73.00%), Query Frame = 3 Query: 54 TRAFNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWTWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF--LPASR 347 +RA +QKCIRAGGKHNDLD+VG HHTFFEMLGN+SFGDYFK++AI + WELLT+ ++LP D+L+ T + + D+EA +IW K +PA R Sbjct: 58 SRATTSQKCIRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKHDAISYAWELLTEHFKLPKDKLWVTVY--------SEDDEAYEIWNKVVGVPAER 149
BLAST of CB417303 vs. ExPASy Swiss-Prot
Match: SYA_BORPE (Alanyl-tRNA synthetase OS=Bordetella pertussis GN=alaS PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 1.060e-25 Identity = 56/99 (56.57%), Postives = 73/99 (73.74%), Query Frame = 3 Query: 57 RAFNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWTWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASR 347 RA ++Q+ +RAGGKHNDL++VG HHTFFEMLGN+SFGDYFK EAI++ WELLT+VY+LPA++L+ T + D+EA DIW K +PA R Sbjct: 59 RATSSQRSVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKREAIQYAWELLTQVYKLPAEKLWVTVY--------QEDDEAYDIWAKEVGVPAER 149
BLAST of CB417303 vs. ExPASy Swiss-Prot
Match: SYA_PSEA6 (Alanyl-tRNA synthetase OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=alaS PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 1.385e-25 Identity = 56/107 (52.34%), Postives = 74/107 (69.16%), Query Frame = 3 Query: 3 KPIFLGTADPNTQLSKLTRAFNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWTWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIW 323 K +FLGT + K TRA ++Q+C+RAGGKHNDL++VG HHTFFEMLGN+SFGDYFK++AI + W LT+V +LP D+L T + + D+EA DIW Sbjct: 48 KDVFLGT-----EQRKYTRATSSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHQAIGYAWSFLTEVLKLPKDKLLVTVY--------SEDDEAFDIW 141
BLAST of CB417303 vs. ExPASy Swiss-Prot
Match: SYA_NITOC (Alanyl-tRNA synthetase OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=alaS PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 1.385e-25 Identity = 58/114 (50.88%), Postives = 76/114 (66.67%), Query Frame = 3 Query: 3 KPIFLGTADPNTQLSKLTRAFNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWTWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPAS 344 K +FLG ++ RA + Q+C+RAGGKHNDL++VG HHTFFEMLGN+SFGDYFK EAI + WELLT+V +LP +RL+ T F D+EA +IWL+ + S Sbjct: 47 KEVFLGR-----EVRAYHRAASAQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKREAIGYAWELLTEVLKLPPERLWVTVF--------KEDDEAANIWLQEIGVS 147
BLAST of CB417303 vs. ExPASy Swiss-Prot
Match: SYA_GEOMG (Alanyl-tRNA synthetase OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=alaS PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 1.385e-25 Identity = 59/107 (55.14%), Postives = 69/107 (64.49%), Query Frame = 3 Query: 3 KPIFLGTADPNTQLSKLTRAFNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWTWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIW 323 K FLG D TRA ++QKC+RAGGKHNDL++VG+ HHTFFEMLGN+SFGDYFK EAI + WE LTK L DRLY T + D+EA DIW Sbjct: 46 KDCFLGMEDRG-----YTRATSSQKCVRAGGKHNDLENVGRTARHHTFFEMLGNFSFGDYFKKEAIAFAWEFLTKDLGLDKDRLYVTVY--------TDDDEAADIW 139
BLAST of CB417303 vs. ExPASy Swiss-Prot
Match: SYA_AZOSE (Alanyl-tRNA synthetase OS=Azoarcus sp. (strain EbN1) GN=alaS PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 1.385e-25 Identity = 56/100 (56.00%), Postives = 72/100 (72.00%), Query Frame = 3 Query: 54 TRAFNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWTWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFL--PASR 347 +RA +QKC+RAGGKHNDL++VG HHTFFEMLGN+SFGDYFK++AI + WELLT+ + LP D+L+ T + A D+EA DIW K + PA R Sbjct: 58 SRATTSQKCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAITYAWELLTEEFGLPKDKLWVTVY--------ADDDEAYDIWTKEIGVPAER 149
BLAST of CB417303 vs. ExPASy Swiss-Prot
Match: SYA_GEOUR (Alanyl-tRNA synthetase OS=Geobacter uraniireducens (strain Rf4) GN=alaS PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 1.808e-25 Identity = 57/107 (53.27%), Postives = 70/107 (65.42%), Query Frame = 3 Query: 3 KPIFLGTADPNTQLSKLTRAFNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWTWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIW 323 K +FLG + RA ++QKC+RAGGKHNDL++VG+ HHTFFEMLGN+SFGDYFK EAI + WE LTK +L DRLY T + D+EA DIW Sbjct: 46 KDVFLGL-----EKRDYVRACSSQKCVRAGGKHNDLENVGRTARHHTFFEMLGNFSFGDYFKKEAIAFAWEFLTKELKLDKDRLYVTVY--------TDDDEAADIW 139
BLAST of CB417303 vs. ExPASy Swiss-Prot
Match: SYA_BURM1 (Alanyl-tRNA synthetase OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=alaS PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 1.808e-25 Identity = 58/109 (53.21%), Postives = 71/109 (65.14%), Query Frame = 3 Query: 3 KPIFLGTADPNTQLSKLTRAFNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWTWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLK 329 K +FLGT TRA Q+ +RAGGKHNDL++VG HHTFFEMLGN+SFGDYFK++AI + WELLT VY LP D+L+ T + D+EA DIW K Sbjct: 46 KDVFLGT-----DRRPYTRATTAQRSVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIRFAWELLTTVYMLPKDKLWVTVY--------QEDDEAYDIWAK 141
BLAST of CB417303 vs. ExPASy Swiss-Prot
Match: SYA_XYLFT (Alanyl-tRNA synthetase OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=alaS PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 2.362e-25 Identity = 54/95 (56.84%), Postives = 68/95 (71.58%), Query Frame = 3 Query: 3 KPIFLGTADPNTQLSKLTRAFNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWTWELLTKVYRLPADRLYATYFGGDEKA 287 K +FLG A+ +++ R + Q C+RAGGKHNDLD VG HHTFFEMLGNWSFGDYFK EAI W WELLT+V+ LP +RL T + D+++ Sbjct: 52 KDVFLG-AEKRSEV----RVADVQCCLRAGGKHNDLDSVGYTARHHTFFEMLGNWSFGDYFKKEAIMWAWELLTQVWELPPERLLVTVYHTDDES 141
BLAST of CB417303 vs. ExPASy Swiss-Prot
Match: SYA_XYLF2 (Alanyl-tRNA synthetase OS=Xylella fastidiosa (strain M23) GN=alaS PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 2.362e-25 Identity = 54/95 (56.84%), Postives = 68/95 (71.58%), Query Frame = 3 Query: 3 KPIFLGTADPNTQLSKLTRAFNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWTWELLTKVYRLPADRLYATYFGGDEKA 287 K +FLG A+ +++ R + Q C+RAGGKHNDLD VG HHTFFEMLGNWSFGDYFK EAI W WELLT+V+ LP +RL T + D+++ Sbjct: 52 KDVFLG-AEKRSEV----RVADVQCCLRAGGKHNDLDSVGYTARHHTFFEMLGNWSFGDYFKKEAIMWAWELLTQVWELPPERLLVTVYHTDDES 141 The following BLAST results are available for this feature:
BLAST of CB417303 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB417303 ID=CB417303; Name=CB417303; organism=Citrus sinensis; type=EST; length=348bpback to top |