CB417308
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB417308 vs. ExPASy Swiss-Prot
Match: HS16B_ORYSJ (16.9 kDa class I heat shock protein 2 OS=Oryza sativa subsp. japonica GN=HSP16.9B PE=2 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 2.955e-43 Identity = 86/148 (58.11%), Postives = 105/148 (70.95%), Query Frame = 3 Query: 120 RRTNVFDPSSLDVWDPFDGFFSSALTNVPSSDRETSQFANAIIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILKISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNVKMEQVKASMENGXXXXXXXXXXXXXXXXXAIEISG 563 RR+NVFDP SLD+WDPFD F S + +SD +T+ FANA IDWKETP++HVFKADLPG++ G +L ISG+RSKE+E+KNDKWHRVERSSG+F+RRFRLP+N K++QVKA MENG AIEISG Sbjct: 5 RRSNVFDPFSLDLWDPFDSVFRSVVP--ATSDNDTAAFANARIDWKETPESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVDQVKAGMENGVLTVTVPKAEVKKPEVKAIEISG 150
BLAST of CB417308 vs. ExPASy Swiss-Prot
Match: HS16A_ORYSJ (16.9 kDa class I heat shock protein 1 OS=Oryza sativa subsp. japonica GN=HSP16.9A PE=1 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 6.583e-43 Identity = 85/148 (57.43%), Postives = 105/148 (70.95%), Query Frame = 3 Query: 120 RRTNVFDPSSLDVWDPFDGFFSSALTNVPSSDRETSQFANAIIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILKISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNVKMEQVKASMENGXXXXXXXXXXXXXXXXXAIEISG 563 RR+NVFDP SLD+WDPFD F S + +SD +T+ FANA IDWKETP++HVFKADLPG++ G +L ISG+RSKE+E+KNDKWHRVERSSG+F+RRFRLP+N K++QVKA +ENG AIEISG Sbjct: 5 RRSNVFDPFSLDLWDPFDSVFRSVVP--ATSDNDTAAFANARIDWKETPESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVDQVKAGLENGVLTVTVPKAEVKKPEVKAIEISG 150
BLAST of CB417308 vs. ExPASy Swiss-Prot
Match: HSP12_DAUCA (18.0 kDa class I heat shock protein OS=Daucus carota PE=3 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 8.597e-43 Identity = 87/159 (54.72%), Postives = 107/159 (67.30%), Query Frame = 3 Query: 90 MSLIPSIFGGRRTNVFDPSSLDVWDPFDGFFSSALTNVPSS-DRETSQFANAIIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILKISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNVKMEQVKASMENGXXXXXXXXXXXXXXXXXAIEISG 563 MS+IPS FG RR+NV +P SLD+WDPF + + S +ET+ FAN IDWKETPQAHVFKADLPGL+ G++L+ISGER+KE+EEKN+KWHRVE SSGKFLRRFRLP+N +++VKA MENG +I ISG Sbjct: 1 MSIIPSFFGSRRSNVLNPFSLDIWDPFQDYPLITSSGTSSEFGKETAAFANTHIDWKETPQAHVFKADLPGLKKEEVKVEVEEGKVLQISGERNKEKEEKNNKWHRVEFSSGKFLRRFRLPENANVDEVKAGMENGVLTVTVPKVEMKKPEVKSIHISG 159
BLAST of CB417308 vs. ExPASy Swiss-Prot
Match: HS17A_ORYSJ (17.9 kDa class I heat shock protein OS=Oryza sativa subsp. japonica GN=HSP17.9A PE=2 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 8.597e-43 Identity = 93/157 (59.24%), Postives = 107/157 (68.15%), Query Frame = 3 Query: 120 RRTNVFDPSSLDVWDPFDGF-----FSSALTNVPSSDR----ETSQFANAIIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILKISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNVKMEQVKASMENGXXXXXXXXXXXXXXXXXAIEISG 563 RR+NVFDP SLD+WDPFDGF SS+ + PS R ET+ FA A IDWKETP+AHVFKAD+PGL+ G IL+ISGER+KEQEEK D+WHRVERSSGKFLRRFRLPDN K EQ+KASMENG +I+ISG Sbjct: 5 RRSNVFDPFSLDLWDPFDGFPFGSGGSSSGSIFPSFPRGASSETAAFAGARIDWKETPEAHVFKADVPGLKKEEVKVEVDDGNILQISGERNKEQEEKTDQWHRVERSSGKFLRRFRLPDNAKPEQIKASMENGVLTVTVPKEEAKKPDVKSIQISG 161
BLAST of CB417308 vs. ExPASy Swiss-Prot
Match: HSP11_HELAN (17.6 kDa class I heat shock protein OS=Helianthus annuus GN=HSP17.6 PE=2 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 1.466e-42 Identity = 82/135 (60.74%), Postives = 99/135 (73.33%), Query Frame = 3 Query: 90 MSLIPSIFGGRRTNVFDPSSLDVWDPFDGFFSSALTNVPSSDRETSQFANAIIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILKISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNVKMEQVKASMENG 494 MS+IPS F +R+N+FDP SLD WDPF G S+ RET+ NA IDWKETP+AHV KADLPG++ GR+L+ISGER +EQEEK+D WHRVERSSGKF+RRFRLP+N KM++VKA MENG Sbjct: 1 MSIIPSFFTSKRSNIFDPFSLDTWDPFQGIIST------EPARETAAIVNARIDWKETPEAHVLKADLPGMKKEEVKVEVEDGRVLQISGERCREQEEKDDTWHRVERSSGKFIRRFRLPENAKMDEVKAMMENG 129
BLAST of CB417308 vs. ExPASy Swiss-Prot
Match: HSP12_SOLPE (17.6 kDa class I heat shock protein OS=Solanum peruvianum PE=2 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 1.915e-42 Identity = 93/159 (58.49%), Postives = 108/159 (67.92%), Query Frame = 3 Query: 90 MSLIPSIFGGRR-TNVFDPSSLDVWDPFDGFFSSALTNVPSSDRETSQFANAIIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILKISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNVKMEQVKASMENGXXXXXXXXXXXXXXXXXAIEISG 563 MSLIP IFG RR T+VFDP S+DV+DPF L S+ ETS FAN IDWKETP+AHVFKADLPGL+ R+L+ISGER+ E+E+KND WHRVERSSGKF+RRFRLP+N KM+QVKASMENG +IEISG Sbjct: 1 MSLIPRIFGDRRSTSVFDPFSIDVFDPF-----KELGFTVSNSGETSAFANTRIDWKETPEAHVFKADLPGLKKEEVKVEVEEDRVLQISGERNVEKEDKNDTWHRVERSSGKFMRRFRLPENAKMDQVKASMENGVLTVTVPKEEVNNPDVKSIEISG 154
BLAST of CB417308 vs. ExPASy Swiss-Prot
Match: HS16C_ORYSJ (16.9 kDa class I heat shock protein 3 OS=Oryza sativa subsp. japonica GN=HSP16.9C PE=2 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 2.501e-42 Identity = 86/148 (58.11%), Postives = 106/148 (71.62%), Query Frame = 3 Query: 120 RRTNVFDPSSLDVWDPFDGFFSSALTNVPSSDRETSQFANAIIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILKISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNVKMEQVKASMENGXXXXXXXXXXXXXXXXXAIEISG 563 RR+NVFDP + D WDPFDG F S + +SDR+T+ FANA +DWKETP++HVFKADLPG++ G +L ISG+RSKE+E+KNDKWHRVERSSG+F+RRFRLP+N K++QVKASMENG AIEISG Sbjct: 5 RRSNVFDPFA-DFWDPFDGVFRSLVP--ATSDRDTAAFANARVDWKETPESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVDQVKASMENGVLTVTVPKAEVKKPEVKAIEISG 149
BLAST of CB417308 vs. ExPASy Swiss-Prot
Match: HS181_ORYSJ (18.1 kDa class I heat shock protein OS=Oryza sativa subsp. japonica GN=HSP18.1 PE=2 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 3.267e-42 Identity = 89/134 (66.42%), Postives = 100/134 (74.63%), Query Frame = 3 Query: 120 RRTNVFDPSSLDVWDPFDGF-FSSALTN----VPSSDR----ETSQFANAIIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILKISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNVKMEQVKASMENG 494 RR+NVFDP SLD+WDPFDGF F S + PS R ET+ FA A IDWKETP+AHVFKAD+PGL+ G +L+ISGERSKEQEEK DKWHRVERSSGKFLRRFRLP+N K EQ+KASMENG Sbjct: 5 RRSNVFDPFSLDLWDPFDGFPFGSGSRSSGSIFPSFPRGTSSETAAFAGARIDWKETPEAHVFKADVPGLKKEEVKVEVEDGNVLQISGERSKEQEEKTDKWHRVERSSGKFLRRFRLPENTKPEQIKASMENG 138
BLAST of CB417308 vs. ExPASy Swiss-Prot
Match: HS174_ORYSJ (17.4 kDa class I heat shock protein OS=Oryza sativa subsp. japonica GN=HSP17.4 PE=2 SV=2) HSP 1 Score: 171.4 bits (433), Expect = 3.267e-42 Identity = 87/150 (58.00%), Postives = 105/150 (70.00%), Query Frame = 3 Query: 120 RRTNVFDPSSLDVWDPFDGF-FSSALTNV-PSSDRETSQFANAIIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILKISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNVKMEQVKASMENGXXXXXXXXXXXXXXXXXAIEISG 563 RR+NVFDP SLD+WDPFDGF F S ++ P ++ + + FA A IDWKETP+AHVFKAD+PGL+ G +L+ISGER KEQEEK DKWHRVERSSGKFLRRFRLP+N K EQ+KASMENG +I+I+G Sbjct: 5 RRSNVFDPFSLDLWDPFDGFPFGSGSGSLFPRANSDAAAFAGARIDWKETPEAHVFKADVPGLKKEEVKVEVEDGNVLQISGERIKEQEEKTDKWHRVERSSGKFLRRFRLPENTKPEQIKASMENGVLTVTVPKEEPKKPDVKSIQITG 154
BLAST of CB417308 vs. ExPASy Swiss-Prot
Match: HSP15_SOYBN (17.6 kDa class I heat shock protein OS=Glycine max GN=HSP17.6-L PE=3 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 4.267e-42 Identity = 89/160 (55.62%), Postives = 106/160 (66.25%), Query Frame = 3 Query: 90 MSLIPSIFGGRRTNVFDPSSLDVWDPFDGFFSSALTNVPSSD--RETSQFANAIIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILKISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNVKMEQVKASMENGXXXXXXXXXXXXXXXXXAIEISG 563 MSLIPSIFGG R+NVFDP SLD+WDPF F +VP+S E S F N +DWKET +AHV KAD+PGL+ R+L+ISGER+ E+E+KND WHRV+RSSGKF+RRFRLP+N K+EQVKA MENG IEISG Sbjct: 1 MSLIPSIFGGPRSNVFDPFSLDMWDPFKDF------HVPTSSVSAENSAFVNTRVDWKETQEAHVLKADIPGLKKEEVKVQIEDDRVLQISGERNVEKEDKNDTWHRVDRSSGKFMRRFRLPENAKVEQVKACMENGVLTVTIPKEEVKKSDVKPIEISG 154 The following BLAST results are available for this feature:
BLAST of CB417308 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 46
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Sequences
The
following sequences are available for this feature:
EST sequence >CB417308 ID=CB417308; Name=CB417308; organism=Citrus sinensis; type=EST; length=620bpback to top |