CB417308
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB417308 vs. ExPASy Swiss-Prot
Match: HS166_ORYSJ (16.6 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP16.6 PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 3.629e-25 Identity = 65/151 (43.05%), Postives = 82/151 (54.30%), Query Frame = 3 Query: 120 RRTNVFDPSSLDVWDPFDGFFSSALTNVPSSDRETSQFANAIIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILKISGERSKEQE---EKNDKWHRVERSSGKFLRRFRLPDNVKMEQVKASMENGXXXXXXXXXXXXXXXXXAIEISG 563 R NV DP S+D W D F + V S N +DWKETP AHVF ADLPG+R G +L ISGER++E++ + +++WH VERSSGKF RRFRLP +++QV ASM+NG AI ISG Sbjct: 5 RSGNVLDPMSVDFWADADPFGA-----VRSLAERCPVLTNVRVDWKETPTAHVFTADLPGVRKDQAKVEVEDGGVLVISGERAREEDVDGKNDERWHHVERSSGKFQRRFRLPRGARVDQVSASMDNGVLTVTVPKEETKKPQLKAIPISG 150
BLAST of CB417308 vs. ExPASy Swiss-Prot
Match: HSP41_SOYBN (22.0 kDa class IV heat shock protein OS=Glycine max GN=HSP22.0 PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 1.991e-23 Identity = 55/122 (45.08%), Postives = 73/122 (59.84%), Query Frame = 3 Query: 153 DVW-----DPFDGFFSSALTNVP---SSDRETSQFANAIIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILKISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNVKMEQVKASMENG 494 D+W DPF L ++P D + + A +DWKETP+ HV D+PGL+ R+L++SGER KE+E+K D WHRVERS GKF R+FRLP NV ++ VKA +ENG Sbjct: 35 DLWSDRFPDPF-----RVLEHIPFGVDKDEASMAMSPARVDWKETPEGHVIMLDVPGLKREEIKVEVEENRVLRVSGERKKEEEKKGDHWHRVERSYGKFWRQFRLPQNVDLDSVKAKLENG 151
BLAST of CB417308 vs. ExPASy Swiss-Prot
Match: HSP41_PEA (22.7 kDa class IV heat shock protein OS=Pisum sativum GN=HSP22.7 PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.291e-22 Identity = 46/87 (52.87%), Postives = 62/87 (71.26%), Query Frame = 3 Query: 234 ANAIIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILKISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNVKMEQVKASMENG 494 ++A +DWKETP+ HV D+PGL+ R+L++SGER KE+++K D WHRVERS GKF R+F+LP NV ++ VKA MENG Sbjct: 73 SHARVDWKETPEGHVIMVDVPGLKKDDIKIEVEENRVLRVSGERKKEEDKKGDHWHRVERSYGKFWRQFKLPQNVDLDSVKAKMENG 159
BLAST of CB417308 vs. ExPASy Swiss-Prot
Match: HSP22_ARATH (22.0 kDa heat shock protein OS=Arabidopsis thaliana GN=HSP22.0 PE=2 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.875e-22 Identity = 58/127 (45.67%), Postives = 77/127 (60.63%), Query Frame = 3 Query: 141 PSSL--DVW-----DPFDGFFSSALTNVPSS-DRETS-QFANAIIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILKISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNVKMEQVKASMENG 494 P SL D+W DPF L +P +R+TS + A +DWKET + H D+PGL+ +L++SGER +E+E+K D+WHRVERS GKF R+F+LPDNV ME VKA +ENG Sbjct: 34 PGSLLSDLWLDRFPDPF-----KILERIPLGLERDTSVALSPARVDWKETAEGHEIMLDIPGLKKDEVKIEVEENGVLRVSGERKREEEKKGDQWHRVERSYGKFWRQFKLPDNVDMESVKAKLENG 155
BLAST of CB417308 vs. ExPASy Swiss-Prot
Match: HS189_ORYSJ (18.9 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP18.9 PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 3.179e-21 Identity = 52/129 (40.31%), Postives = 77/129 (59.69%), Query Frame = 3 Query: 114 GGRRTNVFDPSSLDVWDPF-DGFFSSALTNVPSSDRETSQF-ANAIIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILKISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNVKMEQVKASMENG 494 GG +P S+D+ +PF D +A PS+ + + A +DWKET AHVF AD+PG+R ++L+ISG+R++ EEK ++WHRVERSS +F+R RLP N + V A+++NG Sbjct: 26 GGGGGGEIEPVSVDIMEPFMDAISLTAFAAAPSAAAAAAGVPSTASMDWKETAAAHVFMADMPGVRREEVRVEVEEEKVLRISGQRARAAEEKGERWHRVERSSERFVRTVRLPPNANTDGVHAALDNG 154
BLAST of CB417308 vs. ExPASy Swiss-Prot
Match: HSP12_SOYBN (Class I heat shock protein (Fragment) OS=Glycine max GN=HSP6834-A PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 3.290e-18 Identity = 46/74 (62.16%), Postives = 53/74 (71.62%), Query Frame = 3 Query: 342 ILKISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNVKMEQVKASMENGXXXXXXXXXXXXXXXXXAIEISG 563 IL+ISGER+ E+E+KND WHRVERSSGKF+R FRLPDN K++QVKASMENG AIEISG Sbjct: 1 ILQISGERNVEKEDKNDTWHRVERSSGKFMRSFRLPDNAKVDQVKASMENGVLTVTVPKEEIKKPDVKAIEISG 74
BLAST of CB417308 vs. ExPASy Swiss-Prot
Match: HS17B_ORYSJ (17.9 kDa heat shock protein 2 OS=Oryza sativa subsp. japonica GN=HSP17.9B PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 5.611e-18 Identity = 48/122 (39.34%), Postives = 73/122 (59.84%), Query Frame = 3 Query: 132 VFDPSSLDVWDPFDGFFSSALTNVPSSDRETSQFANAIIDWKETPQAHVFKADLP-GLRXXXXXXXXXXGRILKISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNVKMEQVKASMENG 494 +FD + D W+PF F ++ + + +TS FAN I+ +ET +A+VF+ADLP G++ G +L I+GERS +EEK + H +ERS F RF LPD+ ++ V+ASM+ G Sbjct: 6 LFDTLAFDAWNPFSIFGTTVAADAWLAS-DTSAFANTYIESRETAEAYVFRADLPAGVKKEEVRVEVDEGNVLVITGERSVRREEKGQRSHHIERSCATFFGRFHLPDDAVVDLVRASMDGG 126
BLAST of CB417308 vs. ExPASy Swiss-Prot
Match: HS232_ORYSJ (23.2 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP23.2 PE=2 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 5.252e-16 Identity = 55/142 (38.73%), Postives = 78/142 (54.93%), Query Frame = 3 Query: 93 SLIPSIFGG--RRTNVFDPSSLDVWDPFDGFFSSALTNVPSS-DRE-TSQFANAIIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILKISGERSKEQ--EEKN--DKWHRVERSSGKFLRRFRLPDNVKMEQVKASMENG 494 +L+P GG R V + L DPF L +VP DR+ + + A +DW+ET AH D+PG+R R+L+ISGER +E+ E+K D WHR ERS G+F R+ RLPDN ++ + AS++NG Sbjct: 28 ALLPWFGGGGARDEAVPELGLLAAADPF-----RILEHVPFGFDRDDVAMLSMARVDWRETGDAHEVVVDVPGMRKEDLRVEVEDNRVLRISGERRREETTEQKGGGDHWHREERSYGRFWRQLRLPDNADLDSIAASLDNG 164
BLAST of CB417308 vs. ExPASy Swiss-Prot
Match: HS157_ARATH (15.7 kDa heat shock protein, peroxisomal OS=Arabidopsis thaliana GN=HSP15.7 PE=1 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 2.882e-14 Identity = 38/92 (41.30%), Postives = 56/92 (60.87%), Query Frame = 3 Query: 234 ANAIIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILKISGERSKEQEEKNDKWHRVERSS-----GKFLRRFRLPDNVKMEQVKASMENG 494 + A+IDW E+ +H+FK ++PG G +L I GE KE++++N WH ER + +FLRR LP+NVK++QVKA +ENG Sbjct: 20 STALIDWMESNNSHIFKINVPGYNKEDIKVQIEEGNVLSIRGEGIKEEKKENLVWHVAEREAFSGGGSEFLRRIELPENVKVDQVKAYVENG 111
BLAST of CB417308 vs. ExPASy Swiss-Prot
Match: HS219_ORYSJ (21.9 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP21.9 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 4.916e-14 Identity = 48/145 (33.10%), Postives = 76/145 (52.41%), Query Frame = 3 Query: 84 PIMSLIPSIFGGRRTNVFDPSSLDVWDPFDGFFSSALTNVPSSDRETSQFANAIIDWKETPQAHVFKADLPGLRXXXXXXXXXXG-RILKISGER-----SKEQEEKND--KWHRVERSSGKFLRRFRLPDNVKMEQVKASMENG 494 P +L+P +G + F P G ++A P++ A A DWKETP+AHV D+PG+R R+L++SGER ++E+E + D +WHR ER++G+F RRFR+P + +V A +++G Sbjct: 26 PAAALVPYGYGYMLDDPFRVLEQSPLRPAGGVAAAAAAGEPAA------VALARCDWKETPEAHVVTVDVPGVRRGDVRVEVDEASRVLRVSGERRRAGAAEEEEGERDGVRWHRAERAAGRFWRRFRMPPGADVGRVAARLDDG 164 The following BLAST results are available for this feature:
BLAST of CB417308 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 46
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Sequences
The
following sequences are available for this feature:
EST sequence >CB417308 ID=CB417308; Name=CB417308; organism=Citrus sinensis; type=EST; length=620bpback to top |