CB417310
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB417310 vs. ExPASy Swiss-Prot
Match: PDR12_ORYSJ (Pleiotropic drug resistance protein 12 OS=Oryza sativa subsp. japonica GN=PDR12 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 3.761e-18 Identity = 46/90 (51.11%), Postives = 63/90 (70.00%), Query Frame = 1 Query: 88 ALKWAALEKLPTYNRLRKGILTTSRGEA------------NEVDVYNLGLQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVE 321 AL+WAA+E+LPTY+R+R IL+++ EA EVDV LG+ ERQ I+++ +V + DN+RFL KL+NRIDRVGI+LP VE Sbjct: 59 ALRWAAIERLPTYSRMRTAILSSAEEEAAAAAAGAGKQQYKEVDVRRLGVGERQEFIERVFRVAEEDNQRFLQKLRNRIDRVGIELPTVE 148
BLAST of CB417310 vs. ExPASy Swiss-Prot
Match: PDR2_NICPL (Pleiotropic drug resistance protein 2 OS=Nicotiana plumbaginifolia GN=PDR2 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.429e-17 Identity = 41/81 (50.62%), Postives = 63/81 (77.78%), Query Frame = 1 Query: 91 LKWAALEKLPTYNRLRKG----ILTTSRGEANEVDVYNLGLQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVE 321 LKWAA+++LPTYNRLRKG +++ R +EVD+ LG Q+++ L++ ++KV + DNE+FL +L+NR DRVGI++PK+E Sbjct: 58 LKWAAIDRLPTYNRLRKGMMKEVMSNGRVVHHEVDMTKLGNQDKKVLMESILKVVEDDNEQFLRRLRNRTDRVGIEIPKIE 138
BLAST of CB417310 vs. ExPASy Swiss-Prot
Match: AB29G_ARATH (ABC transporter G family member 29 OS=Arabidopsis thaliana GN=ABCG29 PE=2 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 2.064e-16 Identity = 45/78 (57.69%), Postives = 55/78 (70.51%), Query Frame = 1 Query: 88 ALKWAALEKLPTYNRLRKGILTTSRGEANEVDVYNLGLQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVE 321 ALKWAALEKLPT+ RLR I+ + VDV LG+ +RQ+ ID + KVT+ DNE+FL K +NRIDRV I LP VE Sbjct: 39 ALKWAALEKLPTFARLRTTII---HPHEDLVDVTKLGVDDRQKFIDSIFKVTEEDNEKFLKKFRNRIDRVRIKLPTVE 113
BLAST of CB417310 vs. ExPASy Swiss-Prot
Match: AB36G_ARATH (ABC transporter G family member 36 OS=Arabidopsis thaliana GN=ABCG36 PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 3.520e-16 Identity = 45/86 (52.33%), Postives = 58/86 (67.44%), Query Frame = 1 Query: 88 ALKWAALEKLPTYNRLRKGILTT--------SRGEANEVDVYNLGLQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVE 321 ALKWAA+EKLPTY+RLR ++ ++ + EVDV L ++RQ+ ID + KV + DNER L KL+NRIDRVGI LP VE Sbjct: 52 ALKWAAIEKLPTYSRLRTTLMNAVVEDDVYGNQLMSKEVDVTKLDGEDRQKFIDMVFKVAEQDNERILTKLRNRIDRVGIKLPTVE 137
BLAST of CB417310 vs. ExPASy Swiss-Prot
Match: AB35G_ARATH (ABC transporter G family member 35 OS=Arabidopsis thaliana GN=ABCG35 PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 4.597e-16 Identity = 47/87 (54.02%), Postives = 57/87 (65.52%), Query Frame = 1 Query: 88 ALKWAALEKLPTYNRLRKGILTTSRGEAN---------EVDVYNLGLQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVE 321 ALKWA++EKLPTYNRLR ++ GE + VDV L +ERQ+ ID + KV + DNER L KL+NRIDRVGI LP VE Sbjct: 50 ALKWASIEKLPTYNRLRTSLMP-ELGEDDVYGNQILNKAVDVTKLDGEERQKFIDMVFKVAEQDNERILTKLRNRIDRVGIQLPTVE 135
BLAST of CB417310 vs. ExPASy Swiss-Prot
Match: AB34G_ARATH (ABC transporter G family member 34 OS=Arabidopsis thaliana GN=ABCG34 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 7.842e-16 Identity = 41/81 (50.62%), Postives = 61/81 (75.31%), Query Frame = 1 Query: 91 LKWAALEKLPTYNRLRKGIL--TTSRGEAN--EVDVYNLGLQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVE 321 L+WAALE+LPTY+RLRKG+L T G+ +VDV NL +E++ L++ ++K + DNE+FL +L+ R DRVGI++PK+E Sbjct: 59 LRWAALERLPTYDRLRKGMLPQTMVNGKIGLEDVDVTNLAPKEKKHLMEMILKFVEEDNEKFLRRLRERTDRVGIEVPKIE 139
BLAST of CB417310 vs. ExPASy Swiss-Prot
Match: PDR5_ORYSJ (Pleiotropic drug resistance protein 5 OS=Oryza sativa subsp. japonica GN=PDR5 PE=2 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 1.338e-15 Identity = 41/89 (46.07%), Postives = 62/89 (69.66%), Query Frame = 1 Query: 91 LKWAALEKLPTYNRLRKGILTT------------SRGEANEVDVYNLGLQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVE 321 L+WAALEKLPTY+R+R+GIL S +A+EVD+ NL +E + L++++ K + DNERFL + ++R+D+VGI+LPK+E Sbjct: 51 LRWAALEKLPTYDRMRRGILRKAVDGGGDGEGAGSLFKADEVDIANLDPREGRELMERVFKAVEDDNERFLRRFRDRLDQVGIELPKIE 139
BLAST of CB417310 vs. ExPASy Swiss-Prot
Match: AB39G_ARATH (ABC transporter G family member 39 OS=Arabidopsis thaliana GN=ABCG39 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.635e-13 Identity = 35/81 (43.21%), Postives = 60/81 (74.07%), Query Frame = 1 Query: 91 LKWAALEKLPTYNRLRKGIL--TTSRG--EANEVDVYNLGLQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVE 321 L+WAA+E+LPT++RLRKG+L T++ G E ++D+ L ++++ L++ ++ + DNE+FL L+ R DRVGI++PK+E Sbjct: 61 LRWAAIERLPTFDRLRKGMLPQTSANGKIELEDIDLTRLEPKDKKHLMEMILSFVEEDNEKFLRDLRERTDRVGIEVPKIE 141
BLAST of CB417310 vs. ExPASy Swiss-Prot
Match: PDR15_ORYSJ (Pleiotropic drug resistance protein 15 OS=Oryza sativa subsp. japonica GN=PDR15 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 2.789e-13 Identity = 41/94 (43.62%), Postives = 56/94 (59.57%), Query Frame = 1 Query: 88 ALKWAALEKLPTYNRLRKGIL------------TTSRGEA----NEVDVYNLGLQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVE 321 AL+WAALE+LP+++RLR G++ RG EVDV L L +RQ ++++ V + DNERFL KL+ RIDR GI +P VE Sbjct: 69 ALRWAALERLPSFDRLRTGLMRADADSSGVGVGAVGRGRRWYAHREVDVRTLELAQRQAFVERVFHVAEEDNERFLKKLRARIDRAGIQMPTVE 162
BLAST of CB417310 vs. ExPASy Swiss-Prot
Match: AB32G_ARATH (ABC transporter G family member 32 OS=Arabidopsis thaliana GN=ABCG32 PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 4.758e-13 Identity = 32/77 (41.56%), Postives = 51/77 (66.23%), Query Frame = 1 Query: 91 LKWAALEKLPTYNRLRKGILTTSRGEANEVDVYNLGLQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVE 321 L+WAAL++LPTY+R+R+GI GE E+ + NL E++ L+D+LV + D E+F +++ R D V + PK+E Sbjct: 25 LRWAALQRLPTYSRIRRGIFRDMVGEPKEIQIGNLEASEQRLLLDRLVNSVENDPEQFFARVRKRFDAVDLKFPKIE 101 The following BLAST results are available for this feature:
BLAST of CB417310 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 26
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Sequences
The
following sequences are available for this feature:
EST sequence >CB417310 ID=CB417310; Name=CB417310; organism=Citrus sinensis; type=EST; length=322bpback to top |