CB417425

Overview
NameCB417425
Unique NameCB417425
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length558
Libraries
Library NameType
Mature peel (flavedo) cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB417425 vs. ExPASy Swiss-Prot
Match: HSP7C_CHICK (Heat shock cognate 71 kDa protein OS=Gallus gallus GN=HSPA8 PE=1 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 1.650e-36
Identity = 73/83 (87.95%), Postives = 79/83 (95.18%), Query Frame = 3
Query:  105 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNRVAMNPTNTVFDAKRLIGRRFSDPSVRS 353
            +GPA+GIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKN+VAMNPTNTVFDAKRLIGRRF D  V+S
Sbjct:    3 KGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDSVVQS 85          
BLAST of CB417425 vs. ExPASy Swiss-Prot
Match: HSP7C_BOVIN (Heat shock cognate 71 kDa protein OS=Bos taurus GN=HSPA8 PE=1 SV=2)

HSP 1 Score: 152.14 bits (383), Expect = 1.650e-36
Identity = 73/83 (87.95%), Postives = 79/83 (95.18%), Query Frame = 3
Query:  105 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNRVAMNPTNTVFDAKRLIGRRFSDPSVRS 353
            +GPA+GIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKN+VAMNPTNTVFDAKRLIGRRF D  V+S
Sbjct:    3 KGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVVQS 85          
BLAST of CB417425 vs. ExPASy Swiss-Prot
Match: HS7C1_DICDI (Heat shock cognate 70 kDa protein 1 OS=Dictyostelium discoideum GN=hspB PE=1 SV=2)

HSP 1 Score: 152.14 bits (383), Expect = 1.650e-36
Identity = 73/80 (91.25%), Postives = 78/80 (97.50%), Query Frame = 3
Query:  114 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNRVAMNPTNTVFDAKRLIGRRFSDPSVRS 353
            +IGIDLGTTYSCVGVWQ+DRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKN+VAMNPTNTVFDAKRLIGR+FSD  V+S
Sbjct:    3 SIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRKFSDKEVQS 82          
BLAST of CB417425 vs. ExPASy Swiss-Prot
Match: HSP72_RAT (Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus GN=Hspa2 PE=2 SV=2)

HSP 1 Score: 151.754 bits (382), Expect = 2.155e-36
Identity = 72/82 (87.80%), Postives = 79/82 (96.34%), Query Frame = 3
Query:  108 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNRVAMNPTNTVFDAKRLIGRRFSDPSVRS 353
            GPAIGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKN+VAMNPTNT+FDAKRLIGR+F D +V+S
Sbjct:    5 GPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTIFDAKRLIGRKFEDATVQS 86          
BLAST of CB417425 vs. ExPASy Swiss-Prot
Match: HSP72_HUMAN (Heat shock-related 70 kDa protein 2 OS=Homo sapiens GN=HSPA2 PE=1 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 2.155e-36
Identity = 72/82 (87.80%), Postives = 79/82 (96.34%), Query Frame = 3
Query:  108 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNRVAMNPTNTVFDAKRLIGRRFSDPSVRS 353
            GPAIGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKN+VAMNPTNT+FDAKRLIGR+F D +V+S
Sbjct:    5 GPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTIFDAKRLIGRKFEDATVQS 86          
BLAST of CB417425 vs. ExPASy Swiss-Prot
Match: HSP72_CAPHI (Heat shock-related 70 kDa protein 2 OS=Capra hircus GN=HSPA2 PE=3 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 2.155e-36
Identity = 72/82 (87.80%), Postives = 79/82 (96.34%), Query Frame = 3
Query:  108 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNRVAMNPTNTVFDAKRLIGRRFSDPSVRS 353
            GPAIGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKN+VAMNPTNT+FDAKRLIGR+F D +V+S
Sbjct:    5 GPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTIFDAKRLIGRKFEDATVQS 86          
BLAST of CB417425 vs. ExPASy Swiss-Prot
Match: HSP72_BOVIN (Heat shock-related 70 kDa protein 2 OS=Bos taurus GN=HSPA2 PE=2 SV=2)

HSP 1 Score: 151.754 bits (382), Expect = 2.155e-36
Identity = 72/82 (87.80%), Postives = 79/82 (96.34%), Query Frame = 3
Query:  108 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNRVAMNPTNTVFDAKRLIGRRFSDPSVRS 353
            GPAIGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKN+VAMNPTNT+FDAKRLIGR+F D +V+S
Sbjct:    5 GPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTIFDAKRLIGRKFEDATVQS 86          
BLAST of CB417425 vs. ExPASy Swiss-Prot
Match: HSP70_HYDMA (Heat shock 70 kDa protein OS=Hydra magnipapillata GN=HSP70.1 PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 3.676e-36
Identity = 72/83 (86.75%), Postives = 80/83 (96.39%), Query Frame = 3
Query:  105 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNRVAMNPTNTVFDAKRLIGRRFSDPSVRS 353
            + PAIGIDLGTTYSCVGV+QH +VEIIAN+QGNRTTPSYVAFTDTERLIGDAAKN+VAMNP+NTVFDAKRLIGR+F+DPSV S
Sbjct:    3 KAPAIGIDLGTTYSCVGVFQHGKVEIIANEQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPSNTVFDAKRLIGRKFNDPSVTS 85          
BLAST of CB417425 vs. ExPASy Swiss-Prot
Match: HSP70_ACHKL (Heat shock 70 kDa protein OS=Achlya klebsiana GN=HSP70 PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 4.801e-36
Identity = 69/83 (83.13%), Postives = 80/83 (96.39%), Query Frame = 3
Query:  105 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNRVAMNPTNTVFDAKRLIGRRFSDPSVRS 353
            +G ++GIDLGTTYSCVGVWQ+DRVEIIANDQGNRTTPSYVAFTD+ERLIGDAAKN+VAMNP NTVFDAKRLIGR+F+DP+ ++
Sbjct:    5 QGASVGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPANTVFDAKRLIGRKFNDPATQA 87          
BLAST of CB417425 vs. ExPASy Swiss-Prot
Match: HSP70_TRYCR (Heat shock 70 kDa protein OS=Trypanosoma cruzi GN=HSP70 PE=3 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 6.270e-36
Identity = 72/80 (90.00%), Postives = 78/80 (97.50%), Query Frame = 3
Query:  114 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNRVAMNPTNTVFDAKRLIGRRFSDPSVRS 353
            AIGIDLGTTYSCVGVWQ++RVEIIANDQGNRTTPSYVAFTD+ERLIGDAAKN+VAMNP NTVFDAKRLIGR+FSDP V+S
Sbjct:    6 AIGIDLGTTYSCVGVWQNERVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPRNTVFDAKRLIGRKFSDPVVQS 85          
The following BLAST results are available for this feature:
BLAST of CB417425 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP7C_CHICK1.650e-3687.95Heat shock cognate 71 kDa protein OS=Gallus gallus... [more]
HSP7C_BOVIN1.650e-3687.95Heat shock cognate 71 kDa protein OS=Bos taurus GN... [more]
HS7C1_DICDI1.650e-3691.25Heat shock cognate 70 kDa protein 1 OS=Dictyosteli... [more]
HSP72_RAT2.155e-3687.80Heat shock-related 70 kDa protein 2 OS=Rattus norv... [more]
HSP72_HUMAN2.155e-3687.80Heat shock-related 70 kDa protein 2 OS=Homo sapien... [more]
HSP72_CAPHI2.155e-3687.80Heat shock-related 70 kDa protein 2 OS=Capra hircu... [more]
HSP72_BOVIN2.155e-3687.80Heat shock-related 70 kDa protein 2 OS=Bos taurus ... [more]
HSP70_HYDMA3.676e-3686.75Heat shock 70 kDa protein OS=Hydra magnipapillata ... [more]
HSP70_ACHKL4.801e-3683.13Heat shock 70 kDa protein OS=Achlya klebsiana GN=H... [more]
HSP70_TRYCR6.270e-3690.00Heat shock 70 kDa protein OS=Trypanosoma cruzi GN=... [more]

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Properties
Property NameValue
Genbank descriptionEST0527 Mature peel (flavedo) cDNA subtraction library Citrus sinensis cDNA clone 6P337 similar to dnaK-type molecular chaperone hsc70-3 (acc# JC4786), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB417425 ID=CB417425; Name=CB417425; organism=Citrus sinensis; type=EST; length=558bp
AACAATCAATAAGTAAACACTAAAGCTCGCAAATCATCCGTGCTTTTTTT
CTTTTTTTATTGTTGATAGATTCTTGATTTTGTTAATCGATGGCTGGAAA
AGGCGAAGGTCCTGCTATTGGAATTGACTTGGGCACGACTTACTCCTGTG
TCGGTGTGTGGCAACATGATCGAGTTGAGATCATCGCTAATGATCAAGGT
AACCGAACGACGCCGTCTTATGTGGCGTTTACTGACACTGAGCGTTTGAT
CGGTGACGCTGCCAAGAACCGGGTCGCCATGAACCCCACCAACACTGTTT
TTGATGCTAAGCGTTTGATTGGGAGGCGATTCAGTGATCCTTCAGTACGG
TCAACAAGTAATAACCCAGCCGTTCGTTTTCGTCGACCTACATCATAAAG
GCTTGACATGTCTGTCATAAGCTTCCCAACATTTTTTGATAGATCTCCAA
GGGAAAATATTTCCATTTTCAAGTCCATCTTTGATGCCAAATGGTAAATA
AGATGTGCTGTAAGAATTGCCCCAGGAGGGACATCATCACCATCAGAAAA
TGATCCAG
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