CB417425

Overview
NameCB417425
Unique NameCB417425
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length558
Libraries
Library NameType
Mature peel (flavedo) cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB417425 vs. ExPASy Swiss-Prot
Match: HSP71_HUMAN (Heat shock 70 kDa protein 1A/1B OS=Homo sapiens GN=HSPA1A PE=1 SV=5)

HSP 1 Score: 145.591 bits (366), Expect = 1.544e-34
Identity = 70/80 (87.50%), Postives = 76/80 (95.00%), Query Frame = 3
Query:  114 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNRVAMNPTNTVFDAKRLIGRRFSDPSVRS 353
            AIGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKN+VA+NP NTVFDAKRLIGR+F DP V+S
Sbjct:    6 AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVALNPQNTVFDAKRLIGRKFGDPVVQS 85          
BLAST of CB417425 vs. ExPASy Swiss-Prot
Match: HSP71_CERAE (Heat shock 70 kDa protein 1 OS=Cercopithecus aethiops GN=HSPA1 PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 1.544e-34
Identity = 70/80 (87.50%), Postives = 76/80 (95.00%), Query Frame = 3
Query:  114 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNRVAMNPTNTVFDAKRLIGRRFSDPSVRS 353
            AIGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKN+VA+NP NTVFDAKRLIGR+F DP V+S
Sbjct:    6 AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVALNPQNTVFDAKRLIGRKFGDPVVQS 85          
BLAST of CB417425 vs. ExPASy Swiss-Prot
Match: HSP71_CANFA (Heat shock 70 kDa protein 1 OS=Canis familiaris GN=HSPA1 PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 1.544e-34
Identity = 70/80 (87.50%), Postives = 76/80 (95.00%), Query Frame = 3
Query:  114 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNRVAMNPTNTVFDAKRLIGRRFSDPSVRS 353
            AIGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKN+VA+NP NTVFDAKRLIGR+F DP V+S
Sbjct:    6 AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVALNPQNTVFDAKRLIGRKFGDPVVQS 85          
BLAST of CB417425 vs. ExPASy Swiss-Prot
Match: HS71B_BOVIN (Heat shock 70 kDa protein 1B OS=Bos taurus GN=HSPA1B PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 1.544e-34
Identity = 70/80 (87.50%), Postives = 76/80 (95.00%), Query Frame = 3
Query:  114 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNRVAMNPTNTVFDAKRLIGRRFSDPSVRS 353
            AIGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKN+VA+NP NTVFDAKRLIGR+F DP V+S
Sbjct:    6 AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVALNPQNTVFDAKRLIGRKFGDPVVQS 85          
BLAST of CB417425 vs. ExPASy Swiss-Prot
Match: HS71B_BOSMU (Heat shock 70 kDa protein 1B OS=Bos mutus grunniens GN=HSPA1B PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 1.544e-34
Identity = 70/80 (87.50%), Postives = 76/80 (95.00%), Query Frame = 3
Query:  114 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNRVAMNPTNTVFDAKRLIGRRFSDPSVRS 353
            AIGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKN+VA+NP NTVFDAKRLIGR+F DP V+S
Sbjct:    6 AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVALNPQNTVFDAKRLIGRKFGDPVVQS 85          
BLAST of CB417425 vs. ExPASy Swiss-Prot
Match: HS71A_BOVIN (Heat shock 70 kDa protein 1A OS=Bos taurus GN=HSPA1A PE=2 SV=2)

HSP 1 Score: 145.591 bits (366), Expect = 1.544e-34
Identity = 70/80 (87.50%), Postives = 76/80 (95.00%), Query Frame = 3
Query:  114 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNRVAMNPTNTVFDAKRLIGRRFSDPSVRS 353
            AIGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKN+VA+NP NTVFDAKRLIGR+F DP V+S
Sbjct:    6 AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVALNPQNTVFDAKRLIGRKFGDPVVQS 85          
BLAST of CB417425 vs. ExPASy Swiss-Prot
Match: HSP7D_MANSE (Heat shock 70 kDa protein cognate 4 OS=Manduca sexta PE=2 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 2.017e-34
Identity = 67/83 (80.72%), Postives = 78/83 (93.98%), Query Frame = 3
Query:  105 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNRVAMNPTNTVFDAKRLIGRRFSDPSVRS 353
            + PA+GIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTDT+RLIGDAAKN+VAMNP NT+FDAKRLIGR+F D +V++
Sbjct:    3 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTDRLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQA 85          
BLAST of CB417425 vs. ExPASy Swiss-Prot
Match: HSP7A_DROSI (Heat shock 70 kDa protein cognate 1 (Fragments) OS=Drosophila simulans GN=Hsc70-1 PE=2 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 2.017e-34
Identity = 68/81 (83.95%), Postives = 77/81 (95.06%), Query Frame = 3
Query:  111 PAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNRVAMNPTNTVFDAKRLIGRRFSDPSVRS 353
            PA+GIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFT++ERLIGDAAKN+VAMNP NT+FDAKRLIGRRF D +V+S
Sbjct:    5 PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTESERLIGDAAKNQVAMNPNNTIFDAKRLIGRRFDDATVQS 85          
BLAST of CB417425 vs. ExPASy Swiss-Prot
Match: HSP7A_DROME (Heat shock 70 kDa protein cognate 1 OS=Drosophila melanogaster GN=Hsc70-1 PE=1 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 2.017e-34
Identity = 68/81 (83.95%), Postives = 77/81 (95.06%), Query Frame = 3
Query:  111 PAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNRVAMNPTNTVFDAKRLIGRRFSDPSVRS 353
            PA+GIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFT++ERLIGDAAKN+VAMNP NT+FDAKRLIGRRF D +V+S
Sbjct:    5 PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTESERLIGDAAKNQVAMNPNNTIFDAKRLIGRRFDDATVQS 85          
BLAST of CB417425 vs. ExPASy Swiss-Prot
Match: HSP7A_CAEEL (Heat shock 70 kDa protein A OS=Caenorhabditis elegans GN=hsp-1 PE=1 SV=2)

HSP 1 Score: 145.206 bits (365), Expect = 2.017e-34
Identity = 69/80 (86.25%), Postives = 76/80 (95.00%), Query Frame = 3
Query:  114 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNRVAMNPTNTVFDAKRLIGRRFSDPSVRS 353
            A+GIDLGTTYSCVGV+ H +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKN+VAMNP NTVFDAKRLIGR+F DP+V+S
Sbjct:    6 AVGIDLGTTYSCVGVFMHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHNTVFDAKRLIGRKFDDPAVQS 85          
The following BLAST results are available for this feature:
BLAST of CB417425 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP71_HUMAN1.544e-3487.50Heat shock 70 kDa protein 1A/1B OS=Homo sapiens GN... [more]
HSP71_CERAE1.544e-3487.50Heat shock 70 kDa protein 1 OS=Cercopithecus aethi... [more]
HSP71_CANFA1.544e-3487.50Heat shock 70 kDa protein 1 OS=Canis familiaris GN... [more]
HS71B_BOVIN1.544e-3487.50Heat shock 70 kDa protein 1B OS=Bos taurus GN=HSPA... [more]
HS71B_BOSMU1.544e-3487.50Heat shock 70 kDa protein 1B OS=Bos mutus grunnien... [more]
HS71A_BOVIN1.544e-3487.50Heat shock 70 kDa protein 1A OS=Bos taurus GN=HSPA... [more]
HSP7D_MANSE2.017e-3480.72Heat shock 70 kDa protein cognate 4 OS=Manduca sex... [more]
HSP7A_DROSI2.017e-3483.95Heat shock 70 kDa protein cognate 1 (Fragments) OS... [more]
HSP7A_DROME2.017e-3483.95Heat shock 70 kDa protein cognate 1 OS=Drosophila ... [more]
HSP7A_CAEEL2.017e-3486.25Heat shock 70 kDa protein A OS=Caenorhabditis eleg... [more]

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Properties
Property NameValue
Genbank descriptionEST0527 Mature peel (flavedo) cDNA subtraction library Citrus sinensis cDNA clone 6P337 similar to dnaK-type molecular chaperone hsc70-3 (acc# JC4786), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB417425 ID=CB417425; Name=CB417425; organism=Citrus sinensis; type=EST; length=558bp
AACAATCAATAAGTAAACACTAAAGCTCGCAAATCATCCGTGCTTTTTTT
CTTTTTTTATTGTTGATAGATTCTTGATTTTGTTAATCGATGGCTGGAAA
AGGCGAAGGTCCTGCTATTGGAATTGACTTGGGCACGACTTACTCCTGTG
TCGGTGTGTGGCAACATGATCGAGTTGAGATCATCGCTAATGATCAAGGT
AACCGAACGACGCCGTCTTATGTGGCGTTTACTGACACTGAGCGTTTGAT
CGGTGACGCTGCCAAGAACCGGGTCGCCATGAACCCCACCAACACTGTTT
TTGATGCTAAGCGTTTGATTGGGAGGCGATTCAGTGATCCTTCAGTACGG
TCAACAAGTAATAACCCAGCCGTTCGTTTTCGTCGACCTACATCATAAAG
GCTTGACATGTCTGTCATAAGCTTCCCAACATTTTTTGATAGATCTCCAA
GGGAAAATATTTCCATTTTCAAGTCCATCTTTGATGCCAAATGGTAAATA
AGATGTGCTGTAAGAATTGCCCCAGGAGGGACATCATCACCATCAGAAAA
TGATCCAG
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