CB417425

Overview
NameCB417425
Unique NameCB417425
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length558
Libraries
Library NameType
Mature peel (flavedo) cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB417425 vs. ExPASy Swiss-Prot
Match: HSP72_USTMA (Heat shock 70 kDa protein 2 OS=Ustilago maydis GN=UMS2 PE=3 SV=2)

HSP 1 Score: 144.821 bits (364), Expect = 2.634e-34
Identity = 69/80 (86.25%), Postives = 75/80 (93.75%), Query Frame = 3
Query:  114 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNRVAMNPTNTVFDAKRLIGRRFSDPSVRS 353
            AIGIDLGTTYSCV VWQ+DRVE+IANDQGNRTTPSYVAFTD+ERLIGDAAKN+VAMNP NTVFDAKRLIGR+F D  V+S
Sbjct:    4 AIGIDLGTTYSCVAVWQNDRVEVIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPHNTVFDAKRLIGRKFDDAEVQS 83          
BLAST of CB417425 vs. ExPASy Swiss-Prot
Match: HSP70_LEIDO (Heat shock 70 kDa protein OS=Leishmania donovani GN=HSP70 PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 3.441e-34
Identity = 69/80 (86.25%), Postives = 77/80 (96.25%), Query Frame = 3
Query:  114 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNRVAMNPTNTVFDAKRLIGRRFSDPSVRS 353
            AIGIDLGTTYSCVGVWQ++RV+IIANDQGNRTTPSYVAFTD+ERLIGDAAKN+VAMNP NTVFDAKRLIGR+F+D  V+S
Sbjct:    6 AIGIDLGTTYSCVGVWQNERVDIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPHNTVFDAKRLIGRKFNDSVVQS 85          
BLAST of CB417425 vs. ExPASy Swiss-Prot
Match: HS7C3_DICDI (Heat shock cognate 70 kDa protein 3 OS=Dictyostelium discoideum GN=DDB_G0293674 PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 3.441e-34
Identity = 70/80 (87.50%), Postives = 75/80 (93.75%), Query Frame = 3
Query:  114 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNRVAMNPTNTVFDAKRLIGRRFSDPSVRS 353
            +IGIDLGTTYSCVGVW +DRVEIIANDQGNRTTPSYVAF DTERLIGDAAKN+VAMNP NTVFDAKRLIGR+FSD  V+S
Sbjct:    3 SIGIDLGTTYSCVGVWLNDRVEIIANDQGNRTTPSYVAFNDTERLIGDAAKNQVAMNPINTVFDAKRLIGRKFSDSVVQS 82          
BLAST of CB417425 vs. ExPASy Swiss-Prot
Match: HS71B_PIG (Heat shock 70 kDa protein 1B OS=Sus scrofa GN=HSPA1B PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 3.441e-34
Identity = 69/80 (86.25%), Postives = 76/80 (95.00%), Query Frame = 3
Query:  114 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNRVAMNPTNTVFDAKRLIGRRFSDPSVRS 353
            AIGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKN+VA+NP NTVFDAKRLIGR+F DP V++
Sbjct:    6 AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVALNPQNTVFDAKRLIGRKFGDPVVQA 85          
BLAST of CB417425 vs. ExPASy Swiss-Prot
Match: HSP76_PIG (Heat shock 70 kDa protein 6 OS=Sus scrofa GN=HSPA6 PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 5.869e-34
Identity = 67/80 (83.75%), Postives = 77/80 (96.25%), Query Frame = 3
Query:  114 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNRVAMNPTNTVFDAKRLIGRRFSDPSVRS 353
            AIGIDLGTTYSCVGV+QH RVEI+ANDQGNRTTPSYVAFTDTERL+GDAAK++ A+NP NTVFDAKRLIGR+F+DP+V+S
Sbjct:    8 AIGIDLGTTYSCVGVFQHGRVEILANDQGNRTTPSYVAFTDTERLVGDAAKSQAALNPQNTVFDAKRLIGRKFADPTVQS 87          
BLAST of CB417425 vs. ExPASy Swiss-Prot
Match: HSP75_DROME (Major heat shock 70 kDa protein Bc OS=Drosophila melanogaster GN=Hsp70Bc PE=2 SV=2)

HSP 1 Score: 143.665 bits (361), Expect = 5.869e-34
Identity = 67/79 (84.81%), Postives = 74/79 (93.67%), Query Frame = 3
Query:  111 PAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNRVAMNPTNTVFDAKRLIGRRFSDPSV 347
            PAIGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTD+ERLIGD AKN+VAMNP NTVFDAKRLIGR++ DP +
Sbjct:    2 PAIGIDLGTTYSCVGVYQHGKVEIIANDQGNRTTPSYVAFTDSERLIGDPAKNQVAMNPRNTVFDAKRLIGRKYDDPKI 80          
BLAST of CB417425 vs. ExPASy Swiss-Prot
Match: HSP74_DROME (Major heat shock 70 kDa protein Bbb OS=Drosophila melanogaster GN=Hsp70Bbb PE=2 SV=2)

HSP 1 Score: 143.665 bits (361), Expect = 5.869e-34
Identity = 67/79 (84.81%), Postives = 74/79 (93.67%), Query Frame = 3
Query:  111 PAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNRVAMNPTNTVFDAKRLIGRRFSDPSV 347
            PAIGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTD+ERLIGD AKN+VAMNP NTVFDAKRLIGR++ DP +
Sbjct:    2 PAIGIDLGTTYSCVGVYQHGKVEIIANDQGNRTTPSYVAFTDSERLIGDPAKNQVAMNPRNTVFDAKRLIGRKYDDPKI 80          
BLAST of CB417425 vs. ExPASy Swiss-Prot
Match: HSP73_DROME (Major heat shock 70 kDa protein Bb OS=Drosophila melanogaster GN=Hsp70Bb PE=2 SV=2)

HSP 1 Score: 143.665 bits (361), Expect = 5.869e-34
Identity = 67/79 (84.81%), Postives = 74/79 (93.67%), Query Frame = 3
Query:  111 PAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNRVAMNPTNTVFDAKRLIGRRFSDPSV 347
            PAIGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTD+ERLIGD AKN+VAMNP NTVFDAKRLIGR++ DP +
Sbjct:    2 PAIGIDLGTTYSCVGVYQHGKVEIIANDQGNRTTPSYVAFTDSERLIGDPAKNQVAMNPRNTVFDAKRLIGRKYDDPKI 80          
BLAST of CB417425 vs. ExPASy Swiss-Prot
Match: HSP72_DROSI (Major heat shock 70 kDa protein Ba OS=Drosophila simulans GN=Hsp70Ba PE=2 SV=2)

HSP 1 Score: 143.665 bits (361), Expect = 5.869e-34
Identity = 67/79 (84.81%), Postives = 74/79 (93.67%), Query Frame = 3
Query:  111 PAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNRVAMNPTNTVFDAKRLIGRRFSDPSV 347
            PAIGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTD+ERLIGD AKN+VAMNP NTVFDAKRLIGR++ DP +
Sbjct:    2 PAIGIDLGTTYSCVGVYQHGKVEIIANDQGNRTTPSYVAFTDSERLIGDPAKNQVAMNPRNTVFDAKRLIGRKYDDPKI 80          
BLAST of CB417425 vs. ExPASy Swiss-Prot
Match: HSP72_DROME (Major heat shock 70 kDa protein Ba OS=Drosophila melanogaster GN=Hsp70Ba PE=2 SV=2)

HSP 1 Score: 143.665 bits (361), Expect = 5.869e-34
Identity = 67/79 (84.81%), Postives = 74/79 (93.67%), Query Frame = 3
Query:  111 PAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNRVAMNPTNTVFDAKRLIGRRFSDPSV 347
            PAIGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTD+ERLIGD AKN+VAMNP NTVFDAKRLIGR++ DP +
Sbjct:    2 PAIGIDLGTTYSCVGVYQHGKVEIIANDQGNRTTPSYVAFTDSERLIGDPAKNQVAMNPRNTVFDAKRLIGRKYDDPKI 80          
The following BLAST results are available for this feature:
BLAST of CB417425 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP72_USTMA2.634e-3486.25Heat shock 70 kDa protein 2 OS=Ustilago maydis GN=... [more]
HSP70_LEIDO3.441e-3486.25Heat shock 70 kDa protein OS=Leishmania donovani G... [more]
HS7C3_DICDI3.441e-3487.50Heat shock cognate 70 kDa protein 3 OS=Dictyosteli... [more]
HS71B_PIG3.441e-3486.25Heat shock 70 kDa protein 1B OS=Sus scrofa GN=HSPA... [more]
HSP76_PIG5.869e-3483.75Heat shock 70 kDa protein 6 OS=Sus scrofa GN=HSPA6... [more]
HSP75_DROME5.869e-3484.81Major heat shock 70 kDa protein Bc OS=Drosophila m... [more]
HSP74_DROME5.869e-3484.81Major heat shock 70 kDa protein Bbb OS=Drosophila ... [more]
HSP73_DROME5.869e-3484.81Major heat shock 70 kDa protein Bb OS=Drosophila m... [more]
HSP72_DROSI5.869e-3484.81Major heat shock 70 kDa protein Ba OS=Drosophila s... [more]
HSP72_DROME5.869e-3484.81Major heat shock 70 kDa protein Ba OS=Drosophila m... [more]

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Properties
Property NameValue
Genbank descriptionEST0527 Mature peel (flavedo) cDNA subtraction library Citrus sinensis cDNA clone 6P337 similar to dnaK-type molecular chaperone hsc70-3 (acc# JC4786), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB417425 ID=CB417425; Name=CB417425; organism=Citrus sinensis; type=EST; length=558bp
AACAATCAATAAGTAAACACTAAAGCTCGCAAATCATCCGTGCTTTTTTT
CTTTTTTTATTGTTGATAGATTCTTGATTTTGTTAATCGATGGCTGGAAA
AGGCGAAGGTCCTGCTATTGGAATTGACTTGGGCACGACTTACTCCTGTG
TCGGTGTGTGGCAACATGATCGAGTTGAGATCATCGCTAATGATCAAGGT
AACCGAACGACGCCGTCTTATGTGGCGTTTACTGACACTGAGCGTTTGAT
CGGTGACGCTGCCAAGAACCGGGTCGCCATGAACCCCACCAACACTGTTT
TTGATGCTAAGCGTTTGATTGGGAGGCGATTCAGTGATCCTTCAGTACGG
TCAACAAGTAATAACCCAGCCGTTCGTTTTCGTCGACCTACATCATAAAG
GCTTGACATGTCTGTCATAAGCTTCCCAACATTTTTTGATAGATCTCCAA
GGGAAAATATTTCCATTTTCAAGTCCATCTTTGATGCCAAATGGTAAATA
AGATGTGCTGTAAGAATTGCCCCAGGAGGGACATCATCACCATCAGAAAA
TGATCCAG
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