CB417428

Overview
NameCB417428
Unique NameCB417428
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length227
Libraries
Library NameType
Mature peel (flavedo) cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CB417428 vs. ExPASy Swiss-Prot
Match: HS90A_RAT (Heat shock protein HSP 90-alpha OS=Rattus norvegicus GN=Hsp90aa1 PE=1 SV=3)

HSP 1 Score: 126.716 bits (317), Expect = 3.630e-29
Identity = 62/75 (82.67%), Postives = 67/75 (89.33%), Query Frame = 1 
Query:    1 TIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGR 225
            TIA+SGTK FMEALQAGAD+SMIGQFGVGFYSAYLVAE+V V TKHNDDEQY WES AGGSFTV  D +GEP+GR
Sbjct:  109 TIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTD-TGEPMGR 182
[Close]
BLAST of CB417428 vs. ExPASy Swiss-Prot
Match: HS90A_PIG (Heat shock protein HSP 90-alpha OS=Sus scrofa GN=HSP90AA1 PE=2 SV=3)

HSP 1 Score: 126.716 bits (317), Expect = 3.630e-29
Identity = 62/75 (82.67%), Postives = 67/75 (89.33%), Query Frame = 1 
Query:    1 TIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGR 225
            TIA+SGTK FMEALQAGAD+SMIGQFGVGFYSAYLVAE+V V TKHNDDEQY WES AGGSFTV  D +GEP+GR
Sbjct:  109 TIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTD-TGEPMGR 182
[Close]
BLAST of CB417428 vs. ExPASy Swiss-Prot
Match: HS90A_PANTR (Heat shock protein HSP 90-alpha OS=Pan troglodytes GN=HSP90AA1 PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 3.630e-29
Identity = 62/75 (82.67%), Postives = 67/75 (89.33%), Query Frame = 1 
Query:    1 TIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGR 225
            TIA+SGTK FMEALQAGAD+SMIGQFGVGFYSAYLVAE+V V TKHNDDEQY WES AGGSFTV  D +GEP+GR
Sbjct:  109 TIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTD-TGEPMGR 182
[Close]
BLAST of CB417428 vs. ExPASy Swiss-Prot
Match: HS90A_MOUSE (Heat shock protein HSP 90-alpha OS=Mus musculus GN=Hsp90aa1 PE=1 SV=4)

HSP 1 Score: 126.716 bits (317), Expect = 3.630e-29
Identity = 62/75 (82.67%), Postives = 67/75 (89.33%), Query Frame = 1 
Query:    1 TIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGR 225
            TIA+SGTK FMEALQAGAD+SMIGQFGVGFYSAYLVAE+V V TKHNDDEQY WES AGGSFTV  D +GEP+GR
Sbjct:  109 TIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTD-TGEPMGR 182
[Close]
BLAST of CB417428 vs. ExPASy Swiss-Prot
Match: HS90A_MACFA (Heat shock protein HSP 90-alpha OS=Macaca fascicularis GN=HSP90AA1 PE=2 SV=3)

HSP 1 Score: 126.716 bits (317), Expect = 3.630e-29
Identity = 62/75 (82.67%), Postives = 67/75 (89.33%), Query Frame = 1 
Query:    1 TIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGR 225
            TIA+SGTK FMEALQAGAD+SMIGQFGVGFYSAYLVAE+V V TKHNDDEQY WES AGGSFTV  D +GEP+GR
Sbjct:  109 TIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTD-TGEPMGR 182
[Close]
BLAST of CB417428 vs. ExPASy Swiss-Prot
Match: HS90A_HUMAN (Heat shock protein HSP 90-alpha OS=Homo sapiens GN=HSP90AA1 PE=1 SV=5)

HSP 1 Score: 126.716 bits (317), Expect = 3.630e-29
Identity = 62/75 (82.67%), Postives = 67/75 (89.33%), Query Frame = 1 
Query:    1 TIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGR 225
            TIA+SGTK FMEALQAGAD+SMIGQFGVGFYSAYLVAE+V V TKHNDDEQY WES AGGSFTV  D +GEP+GR
Sbjct:  109 TIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTD-TGEPMGR 182
[Close]
BLAST of CB417428 vs. ExPASy Swiss-Prot
Match: HS90A_HORSE (Heat shock protein HSP 90-alpha (Fragment) OS=Equus caballus GN=HSP90AA1 PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 3.630e-29
Identity = 62/75 (82.67%), Postives = 67/75 (89.33%), Query Frame = 1 
Query:    1 TIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGR 225
            TIA+SGTK FMEALQAGAD+SMIGQFGVGFYSAYLVAE+V V TKHNDDEQY WES AGGSFTV  D +GEP+GR
Sbjct:   98 TIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTD-TGEPMGR 171
[Close]
BLAST of CB417428 vs. ExPASy Swiss-Prot
Match: HS90A_BOVIN (Heat shock protein HSP 90-alpha OS=Bos taurus GN=HSP90AA1 PE=2 SV=3)

HSP 1 Score: 126.716 bits (317), Expect = 3.630e-29
Identity = 62/75 (82.67%), Postives = 67/75 (89.33%), Query Frame = 1 
Query:    1 TIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGR 225
            TIA+SGTK FMEALQAGAD+SMIGQFGVGFYSAYLVAE+V V TKHNDDEQY WES AGGSFTV  D +GEP+GR
Sbjct:  109 TIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTD-TGEPMGR 182
[Close]
BLAST of CB417428 vs. ExPASy Swiss-Prot
Match: HSP90_EIMTE (Heat shock protein 90 OS=Eimeria tenella GN=HSP90 PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 8.087e-29
Identity = 60/75 (80.00%), Postives = 65/75 (86.67%), Query Frame = 1 
Query:    1 TIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGR 225
            TIARSGTK FMEALQAG D+SMIGQFGVGFYSAYLVA+ V V +KHNDDEQY+WES AGGSFTV +D   EPLGR
Sbjct:   96 TIARSGTKAFMEALQAGGDISMIGQFGVGFYSAYLVADSVTVVSKHNDDEQYVWESAAGGSFTVQKDDKYEPLGR 170
[Close]
BLAST of CB417428 vs. ExPASy Swiss-Prot
Match: HS90A_CRIGR (Heat shock protein HSP 90-alpha OS=Cricetulus griseus GN=HSP90AA1 PE=2 SV=2)

HSP 1 Score: 125.561 bits (314), Expect = 8.087e-29
Identity = 61/75 (81.33%), Postives = 67/75 (89.33%), Query Frame = 1 
Query:    1 TIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYIWESQAGGSFTVTRDVSGEPLGR 225
            TIA+SGTK FMEALQAGAD+SMIGQFGVGFY+AYLVAE+V V TKHNDDEQY WES AGGSFTV  D +GEP+GR
Sbjct:  109 TIAKSGTKAFMEALQAGADISMIGQFGVGFYTAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTD-TGEPMGR 182
The following BLAST results are available for this feature:
BLAST of CB417428 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 131
Match NameE-valueIdentityDescription
HS90A_RAT3.630e-2982.67Heat shock protein HSP 90-alpha OS=Rattus norvegic... [more]
HS90A_PIG3.630e-2982.67Heat shock protein HSP 90-alpha OS=Sus scrofa GN=H... [more]
HS90A_PANTR3.630e-2982.67Heat shock protein HSP 90-alpha OS=Pan troglodytes... [more]
HS90A_MOUSE3.630e-2982.67Heat shock protein HSP 90-alpha OS=Mus musculus GN... [more]
HS90A_MACFA3.630e-2982.67Heat shock protein HSP 90-alpha OS=Macaca fascicul... [more]
HS90A_HUMAN3.630e-2982.67Heat shock protein HSP 90-alpha OS=Homo sapiens GN... [more]
HS90A_HORSE3.630e-2982.67Heat shock protein HSP 90-alpha (Fragment) OS=Equu... [more]
HS90A_BOVIN3.630e-2982.67Heat shock protein HSP 90-alpha OS=Bos taurus GN=H... [more]
HSP90_EIMTE8.087e-2980.00Heat shock protein 90 OS=Eimeria tenella GN=HSP90 ... [more]
HS90A_CRIGR8.087e-2981.33Heat shock protein HSP 90-alpha OS=Cricetulus gris... [more]

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Properties
Property NameValue
Genbank descriptionEST0531 Mature peel (flavedo) cDNA subtraction library Citrus sinensis cDNA clone 6P346 similar to heat shock protein 83 (acc# 1710352A), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB417428 ID=CB417428; Name=CB417428; organism=Citrus sinensis; type=EST; length=227bp
ACAATTGCGAGATCCGGGACCAAGGAGTTTATGGAGGCTTTGCAGGCCGG
GGCTGATGTGTCAATGATTGGTCAATTTGGTGTTGGTTTCTATTCGGCTT
ACCTTGTTGCTGAGAGGGTTGTTGTGACTACAAAGCACAATGACGATGAG
CAATACATCTGGGAATCACAAGCTGGTGGTTCTTTCACTGTTACCAGGGA
TGTTAGTGGAGAGCCCCTTGGTAGAGG
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