CB610471

Overview
NameCB610471
Unique NameCB610471
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length683
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig384 contig Csv1_Contig384:1..683. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB610471 vs. ExPASy Swiss-Prot
Match: SAPK5_ORYSJ (Serine/threonine-protein kinase SAPK5 OS=Oryza sativa subsp. japonica GN=SAPK5 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 4.846e-24
Identity = 57/116 (49.14%), Postives = 79/116 (68.10%), Query Frame = 2
Query:    5 DPEEPKNFRKTIHRILSVQYSIPDYVHISPECRHLISRIFVADPAKRISIPEIRNHEWFLKNLPADLVVD---------------NTTNNQFEEPDQPMQSIDEIMQIIAEA-TIP 304
            DP++PKNFRKTI RI+SVQY IP+YVH+S  CRHL+SRIFVA+P KRIS+ EI++H WFLKNLP +L  +               ++ ++         QS+++IM+I+ EA T+P
Sbjct:  202 DPKDPKNFRKTISRIMSVQYKIPEYVHVSQPCRHLLSRIFVANPYKRISMGEIKSHPWFLKNLPRELKEEAQAVYYNRRGADHAASSASSAAAAAAFSPQSVEDIMRIVQEAQTVP 317          
BLAST of CB610471 vs. ExPASy Swiss-Prot
Match: SAPK4_ORYSJ (Serine/threonine-protein kinase SAPK4 OS=Oryza sativa subsp. japonica GN=SAPK4 PE=2 SV=2)

HSP 1 Score: 106.301 bits (264), Expect = 1.559e-22
Identity = 55/106 (51.89%), Postives = 74/106 (69.81%), Query Frame = 2
Query:    5 DPEEPKNFRKTIHRILSVQYSIPDYVHISPECRHLISRIFVADPAKRISIPEIRNHEWFLKNLPADLVVDNTTNNQFEEPDQPM-----QSIDEIMQIIAEA-TIP 304
            D ++PKN RKTI RI+SVQY IPDYVHIS EC+ LI+RIFV +P +RI++ EI++H WFLKNLP +L    T    +   D  +     Q+ +EIM+I+ EA T+P
Sbjct:  202 DQDDPKNIRKTIQRIMSVQYKIPDYVHISAECKQLIARIFVNNPLRRITMKEIKSHPWFLKNLPRELT--ETAQAMYYRRDNSVPSFSDQTSEEIMKIVQEARTMP 305          
BLAST of CB610471 vs. ExPASy Swiss-Prot
Match: SRK2J_ARATH (Serine/threonine-protein kinase SRK2J OS=Arabidopsis thaliana GN=SRK2J PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 3.839e-21
Identity = 53/114 (46.49%), Postives = 74/114 (64.91%), Query Frame = 2
Query:    5 DPEEPKNFRKTIHRILSVQYSIPDYVHISPECRHLISRIFVADPAKRISIPEIRNHEWFLKNLPADLVVDNTTNNQFEEPDQPM-------------QSIDEIMQIIAEA-TIP 304
            DP++P+NFRKT+ +I++V Y IP YVHIS +CR L+SRIFVA+P  R ++ EI++H WFLKNLP +L          +EP Q +             Q ++EIM+I+ EA TIP
Sbjct:  202 DPKDPRNFRKTVQKIMAVNYKIPGYVHISEDCRKLLSRIFVANPLHRSTLKEIKSHAWFLKNLPREL----------KEPAQAIYYQRNVNLINFSPQRVEEIMKIVGEARTIP 305          
The following BLAST results are available for this feature:
BLAST of CB610471 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
SAPK5_ORYSJ4.846e-2449.14Serine/threonine-protein kinase SAPK5 OS=Oryza sat... [more]
SAPK4_ORYSJ1.559e-2251.89Serine/threonine-protein kinase SAPK4 OS=Oryza sat... [more]
SRK2J_ARATH3.839e-2146.49Serine/threonine-protein kinase SRK2J OS=Arabidops... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0003_IaF_G10 Mature Albedo Citrus sinensis cDNA clone ALBEDO0003_IaF_G10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610471 ID=CB610471; Name=CB610471; organism=Citrus sinensis; type=EST; length=683bp
GGGGGATCCTGAAGAGCCAAAGAACTTCCGCAAGACAATACATCGAATTC
TAAGTGTTCAGTACTCTATTCCGGATTATGTTCATATATCTCCTGAGTGC
CGCCATCTGATCTCTAGGATTTTCGTAGCTGACCCTGCAAAGAGGATATC
CATACCCGAGATCAGAAACCACGAATGGTTTTTGAAGAACCTTCCAGCAG
ATCTTGTGGTGGATAACACAACAAACAATCAGTTTGAAGAACCAGATCAG
CCTATGCAAAGCATTGACGAAATCATGCAGATAATTGCTGAAGCCACCAT
ACCTGCTGCTGGTACCCAGAGCCTCAACCAGTGTTTGAATGGTAGTCTTG
ACATTGATGATGAAATGGACGAAGACATAGACACTGATCCTGATCTTGAC
ATCGATAGCAGCGGGGAGATTGTATATGCTATGTGATTGTCTTAAAGCTT
GTTGAACCGGGTTAGTTCAACGGTCCATTTGTTTACGGGATTTGGCTATT
TAGGTGTGAAGAATTAAAGAAACCTTTAACTCTCTGTTTGCAGTGGAGGA
TTATACATGTGTTCTGTGTCGAGCCACTTTTAAGTGGCATATATAATGAT
CNTACTGTAATTTACTCTTCTGTTATACGGTGATGTAATAAAACTTGGTA
GTGTTAAGTGTTTGNNAAAAAAAAAAAAAAAAA
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