CB610481

Overview
NameCB610481
Unique NameCB610481
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length678
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig305 contig Csv1_Contig305:7..684. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB610481 vs. ExPASy Swiss-Prot
Match: SAP10_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 10 OS=Arabidopsis thaliana GN=SAP10 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.146e-17
Identity = 49/149 (32.89%), Postives = 72/149 (48.32%), Query Frame = 1
Query:  232 CINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKA 678
            C   CG +G+    N+CS CYK  +L+   A                                   EP+    Q  C    S +VE +P +   RC  CK++VG+ GFKCRCG+++C SHRY ++H+CPFDY+ + R A+    P+I+A
Sbjct:   10 CEGGCGLYGTRVNNNLCSLCYKKSVLQHSPAL--------------------------------RFEPETEQSQ-CCPPTNSPAVEEEPVK-KRRCGICKRKVGMLGFKCRCGHMFCGSHRYPEEHSCPFDYKQSGRLALATQLPLIRA 124          
BLAST of CB610481 vs. ExPASy Swiss-Prot
Match: SAP15_ORYSJ (Zinc finger AN1 domain-containing stress-associated protein 15 OS=Oryza sativa subsp. japonica GN=SAP15 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.334e-17
Identity = 35/56 (62.50%), Postives = 46/56 (82.14%), Query Frame = 1
Query:  511 SRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKA 678
            +RC+ C+KRVGLTGF+CRCG L+C  HR+S+ H C FDY+TA R+ I +ANPVI+A
Sbjct:  113 NRCNVCRKRVGLTGFRCRCGELFCPRHRHSETHECSFDYKTAGREEIARANPVIRA 168          
BLAST of CB610481 vs. ExPASy Swiss-Prot
Match: SAP14_ORYSJ (Zinc finger AN1 domain-containing stress-associated protein 14 OS=Oryza sativa subsp. japonica GN=SAP14 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.686e-16
Identity = 35/72 (48.61%), Postives = 50/72 (69.44%), Query Frame = 1
Query:  463 ASELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKA 678
            AS  S S     +   +RC++C+++VGLTGFKCRCG  +C  HRY+D+H C FDY+++ R+ I K NPV+ A
Sbjct:  159 ASYSSSSPATGEQPEANRCATCRRKVGLTGFKCRCGGTFCGGHRYADEHGCGFDYKSSGRELIAKQNPVVVA 230          
BLAST of CB610481 vs. ExPASy Swiss-Prot
Match: ZFAN3_RAT (AN1-type zinc finger protein 3 OS=Rattus norvegicus GN=Zfand3 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.893e-12
Identity = 52/197 (26.40%), Postives = 77/197 (39.09%), Query Frame = 1
Query:  211 PPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGS----IVNETSSSNGSESVAAATVDVQASSVEPKIISVQP----------------------SCASELSESVEAKPKEGP--------------------SRCSSCKKRVGLTGFK---CRCGNLYCVSHRYSDKHNCPFDYRTAARDAII 654
            PP  P      CGF+GS  TMN+CSKC+ D   KQ       S+  S       ET+S N + SV   T+     S+  ++    P                      SC ++     EA P + P                     RC  C+ ++ L   +   CRCG ++C+ HR  ++H+C FD+    R+  I
Sbjct:   15 PPRCP------CGFWGSSKTMNLCSKCFADFQKKQPDDDSTPSTSNSQSDLFSEETTSDNNNTSVTTPTLSPSQQSLPTELNVTSPSEEECGPCTDTAHVSLITPTKRSCGADSQSESEASPVKRPRLVENPERPEESGRSKQKSRRRCFQCQTKLELVQQELGSCRCGYVFCMLHRLPEQHDCTFDHMGRGREEAI 205          
BLAST of CB610481 vs. ExPASy Swiss-Prot
Match: ZFAN3_MOUSE (AN1-type zinc finger protein 3 OS=Mus musculus GN=Zfand3 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.472e-12
Identity = 52/197 (26.40%), Postives = 77/197 (39.09%), Query Frame = 1
Query:  211 PPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGS----IVNETSSSNGSESVAAATVDVQASSVEPKIISVQP----------------------SCASELSESVEAKPKEGP--------------------SRCSSCKKRVGLTGFK---CRCGNLYCVSHRYSDKHNCPFDYRTAARDAII 654
            PP  P      CGF+GS  TMN+CSKC+ D   KQ       S+  S       ET+S N + SV   T+     S+  ++    P                      SC ++     EA P + P                     RC  C+ ++ L   +   CRCG ++C+ HR  ++H+C FD+    R+  I
Sbjct:   15 PPRCP------CGFWGSSKTMNLCSKCFADFQKKQPDDDSTPSTSNSQSDLFSEETTSDNNNTSVTTPTLSPSQQSLPTELNVTSPSTEECGPCTDTAHVSLITPTKRSCGADSQSENEASPVKRPRLVENPERPEESGRSKQKSRRRCFQCQTKLELVQQELGSCRCGYVFCMLHRLPEQHDCTFDHMGRGREEAI 205          
BLAST of CB610481 vs. ExPASy Swiss-Prot
Match: ZFAN3_HUMAN (AN1-type zinc finger protein 3 OS=Homo sapiens GN=ZFAND3 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.217e-12
Identity = 51/197 (25.89%), Postives = 77/197 (39.09%), Query Frame = 1
Query:  211 PPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGS----IVNETSSSNGSESVAAATVDVQASSVEPKIISVQP----------------------SCASELSESVEAKPKEGP--------------------SRCSSCKKRVGLTGFK---CRCGNLYCVSHRYSDKHNCPFDYRTAARDAII 654
            PP  P      CGF+GS  TMN+CSKC+ D   KQ     A S+  S       ET+S N + S+   T+      +  ++    P                      SC ++     EA P + P                     RC  C+ ++ L   +   CRCG ++C+ HR  ++H+C FD+    R+  I
Sbjct:   15 PPRCP------CGFWGSSKTMNLCSKCFADFQKKQPDDDSAPSTSNSQSDLFSEETTSDNNNTSITTPTLSPSQQPLPTELNVTSPSKEECGPCTDTAHVSLITPTKRSCGTDSQSENEASPVKRPRLLENTERSEETSRSKQKSRRRCFQCQTKLELVQQELGSCRCGYVFCMLHRLPEQHDCTFDHMGRGREEAI 205          
BLAST of CB610481 vs. ExPASy Swiss-Prot
Match: ZFAN3_XENLA (AN1-type zinc finger protein 3 homolog OS=Xenopus laevis GN=zfand3 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.395e-12
Identity = 54/196 (27.55%), Postives = 79/196 (40.31%), Query Frame = 1
Query:  211 PPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGS----IVNETSSSNGSESVAAATVD-VQASSVEPKIIS--------------------VQPSCASELSESVEAKPKEGP--------------------SRCSSCKKRVGLTGFK---CRCGNLYCVSHRYSDKHNCPFDYRTAARDAII 654
            PP  P      CGF+GS  TMN+CSKC+ D   KQ     A S+  S      +ET S NG+ S+   TV+  Q    E  + S                     + SC S+     +  P + P                     RC  C+ ++ L   +   CRCG ++C+ HR  ++H+C FD+    R+  I
Sbjct:   15 PPRCP------CGFWGSSKTMNLCSKCFADFQKKQPDEDTAPSTSSSQSDLFPSETDSDNGNTSIPTPTVNPTQQLPTELNVDSPSKEDCGPCTDSAHVSLTTPSKRSCDSDSQSEDDTSPMKRPRLLDSGDRPDNSSRSKQKSRRRCFRCQIKLELVQQELGSCRCGYVFCMLHRLPEQHDCTFDHMGRGREEAI 204          
BLAST of CB610481 vs. ExPASy Swiss-Prot
Match: ANUB1_HUMAN (AN1-type zinc finger and ubiquitin domain-containing protein 1 OS=Homo sapiens GN=ANUBL1 PE=2 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 6.090e-11
Identity = 27/61 (44.26%), Postives = 42/61 (68.85%), Query Frame = 1
Query:  499 KEGPSRCSSCKKRVGL-TGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKA 678
            K+  + C  C K+ GL + ++CRCGN +C SHRY++ H C +DY++A R  + +ANPV+ A
Sbjct:  661 KKTTNHCFLCGKKTGLASSYECRCGNNFCASHRYAETHGCTYDYKSAGRRYLHEANPVVNA 721          
The following BLAST results are available for this feature:
BLAST of CB610481 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
SAP10_ARATH1.146e-1732.89Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP15_ORYSJ3.334e-1762.50Zinc finger AN1 domain-containing stress-associate... [more]
SAP14_ORYSJ3.686e-1648.61Zinc finger AN1 domain-containing stress-associate... [more]
ZFAN3_RAT1.893e-1226.40AN1-type zinc finger protein 3 OS=Rattus norvegicu... [more]
ZFAN3_MOUSE2.472e-1226.40AN1-type zinc finger protein 3 OS=Mus musculus GN=... [more]
ZFAN3_HUMAN4.217e-1225.89AN1-type zinc finger protein 3 OS=Homo sapiens GN=... [more]
ZFAN3_XENLA9.395e-1227.55AN1-type zinc finger protein 3 homolog OS=Xenopus ... [more]
ANUB1_HUMAN6.090e-1144.26AN1-type zinc finger and ubiquitin domain-containi... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0003_IaF_E08 Mature Albedo Citrus sinensis cDNA clone ALBEDO0003_IaF_E08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610481 ID=CB610481; Name=CB610481; organism=Citrus sinensis; type=EST; length=678bp
GGGGGAGACACCCGGAAAGGGAAACGAGGACGTCTCTCATCGGTTTTTGC
CTGCTCTCTCCCCGATAGGCCGATCTGGTCCATTTAATTTTAGGGGCTCA
TTGGATGCTGGCTTGAGCTCGGGGATCGGCTTAAGGGATTCATTGCTGTT
TCTTCTGTTGCTCGCAGGGGTGGTGAAAACATGGACCATGATGAGACTGG
ATGCCAAGCTCCTCCTGAGGGCCCTATCTTGTGCATCAACAATTGTGGTT
TCTTTGGAAGTGTGGCTACTATGAATATGTGTTCCAAATGCTACAAGGAT
ATAATGCTGAAACAGGATCAAGCTAAGCTTGCTGCTTCATCTATTGGAAG
CATTGTGAATGAAACGTCAAGCAGCAATGGAAGTGAATCTGTTGCTGCTG
CCACTGTTGATGTGCAAGCTAGTTCAGTGGAGCCAAAAATCATCTCTGTG
CAGCCATCATGTGCTTCAGAATTGAGCGAGAGTGTGGAGGCAAAGCCGAA
GGAGGGTCCCAGCCGGTGCAGCAGTTGCAAGAAGCGTGTTGGTTTAACAG
GATTCAAATGTCGCTGTGGTAACTTATACTGTGTGTCACATCGCTATTCG
GACAAACATAACTGCCCCTTTGACTACCGCACTGCTGCTAGGGATGCTAT
AATTAAAGCAAACCCTGTGATCAAGGCT
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