CB610502

Overview
NameCB610502
Unique NameCB610502
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length214
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB610502 vs. ExPASy Swiss-Prot
Match: CALM_PYTSP (Calmodulin OS=Pythium splendens PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 5.473e-22
Identity = 48/52 (92.31%), Postives = 52/52 (100.00%), Query Frame = 1
Query:    7 NGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 162
            NGFISAAELRH+MTNLGEKLTDEEVDEMIREAD+DGDGQINYEEFVK+MM+K
Sbjct:   98 NGFISAAELRHIMTNLGEKLTDEEVDEMIREADIDGDGQINYEEFVKMMMSK 149          
BLAST of CB610502 vs. ExPASy Swiss-Prot
Match: CALM_PHYIN (Calmodulin OS=Phytophthora infestans GN=CMD1 PE=3 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 5.473e-22
Identity = 48/52 (92.31%), Postives = 52/52 (100.00%), Query Frame = 1
Query:    7 NGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 162
            NGFISAAELRH+MTNLGEKLTDEEVDEMIREAD+DGDGQINYEEFVK+MM+K
Sbjct:   98 NGFISAAELRHIMTNLGEKLTDEEVDEMIREADIDGDGQINYEEFVKMMMSK 149          
BLAST of CB610502 vs. ExPASy Swiss-Prot
Match: CALM_ACHKL (Calmodulin OS=Achlya klebsiana GN=CMD1 PE=3 SV=3)

HSP 1 Score: 102.064 bits (253), Expect = 9.336e-22
Identity = 48/52 (92.31%), Postives = 52/52 (100.00%), Query Frame = 1
Query:    7 NGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 162
            NGFISAAELRH+MTNLGEKLTDEEVDEMIREAD+DGDGQINYEEFVK+MM+K
Sbjct:   98 NGFISAAELRHMMTNLGEKLTDEEVDEMIREADIDGDGQINYEEFVKMMMSK 149          
BLAST of CB610502 vs. ExPASy Swiss-Prot
Match: CALM_MOUSC (Calmodulin OS=Mougeotia scalaris PE=2 SV=3)

HSP 1 Score: 101.679 bits (252), Expect = 1.219e-21
Identity = 48/53 (90.57%), Postives = 52/53 (98.11%), Query Frame = 1
Query:    4 QNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 162
            QNG+ISAA+ RHVMTNLGEKLTDEEVDEMIREADVDGDGQ+NYEEFVK+MMAK
Sbjct:   97 QNGYISAADWRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEEFVKMMMAK 149          
BLAST of CB610502 vs. ExPASy Swiss-Prot
Match: CALM_FAGSY (Calmodulin OS=Fagus sylvatica GN=CAMF1 PE=2 SV=3)

HSP 1 Score: 101.293 bits (251), Expect = 1.592e-21
Identity = 52/53 (98.11%), Postives = 52/53 (98.11%), Query Frame = 1
Query:    4 QNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 162
            QNGFISAAELRHVMTNLGEKLTDE VDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct:   97 QNGFISAAELRHVMTNLGEKLTDE-VDEMIREADVDGDGQINYEEFVKVMMAK 148          
BLAST of CB610502 vs. ExPASy Swiss-Prot
Match: CALM_METSE (Calmodulin OS=Metridium senile PE=1 SV=3)

HSP 1 Score: 100.523 bits (249), Expect = 2.716e-21
Identity = 47/52 (90.38%), Postives = 51/52 (98.08%), Query Frame = 1
Query:    7 NGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 162
            NGFISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFVK+M +K
Sbjct:   98 NGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVKMMTSK 149          
BLAST of CB610502 vs. ExPASy Swiss-Prot
Match: CALM_LUMRU (Calmodulin OS=Lumbricus rubellus PE=2 SV=3)

HSP 1 Score: 100.523 bits (249), Expect = 2.716e-21
Identity = 47/52 (90.38%), Postives = 51/52 (98.08%), Query Frame = 1
Query:    7 NGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 162
            NGFISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV +MM+K
Sbjct:   98 NGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMMSK 149          
BLAST of CB610502 vs. ExPASy Swiss-Prot
Match: CALM_EPIAK (Calmodulin OS=Epinephelus akaara GN=calm PE=2 SV=3)

HSP 1 Score: 99.7525 bits (247), Expect = 4.633e-21
Identity = 46/52 (88.46%), Postives = 51/52 (98.08%), Query Frame = 1
Query:    7 NGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 162
            NG+ISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct:   98 NGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQIMTAK 149          
BLAST of CB610502 vs. ExPASy Swiss-Prot
Match: CALM_STYLE (Calmodulin OS=Stylonychia lemnae PE=3 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 6.051e-21
Identity = 48/52 (92.31%), Postives = 50/52 (96.15%), Query Frame = 1
Query:    7 NGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 162
            NG ISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDG INYEEFV++MMAK
Sbjct:   98 NGLISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGHINYEEFVRMMMAK 149          
BLAST of CB610502 vs. ExPASy Swiss-Prot
Match: CALM_PLEOS (Calmodulin OS=Pleurotus ostreatus GN=CMD1 PE=2 SV=3)

HSP 1 Score: 99.3673 bits (246), Expect = 6.051e-21
Identity = 47/52 (90.38%), Postives = 51/52 (98.08%), Query Frame = 1
Query:    7 NGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 162
            NG+ISAAELRHVMTNLGEKLTD EVDEMIREADVDGDGQINYEEFVK+M++K
Sbjct:   98 NGYISAAELRHVMTNLGEKLTDNEVDEMIREADVDGDGQINYEEFVKMMLSK 149          
The following BLAST results are available for this feature:
BLAST of CB610502 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 132
Match NameE-valueIdentityDescription
CALM_PYTSP5.473e-2292.31Calmodulin OS=Pythium splendens PE=2 SV=1[more]
CALM_PHYIN5.473e-2292.31Calmodulin OS=Phytophthora infestans GN=CMD1 PE=3 ... [more]
CALM_ACHKL9.336e-2292.31Calmodulin OS=Achlya klebsiana GN=CMD1 PE=3 SV=3[more]
CALM_MOUSC1.219e-2190.57Calmodulin OS=Mougeotia scalaris PE=2 SV=3[more]
CALM_FAGSY1.592e-2198.11Calmodulin OS=Fagus sylvatica GN=CAMF1 PE=2 SV=3[more]
CALM_METSE2.716e-2190.38Calmodulin OS=Metridium senile PE=1 SV=3[more]
CALM_LUMRU2.716e-2190.38Calmodulin OS=Lumbricus rubellus PE=2 SV=3[more]
CALM_EPIAK4.633e-2188.46Calmodulin OS=Epinephelus akaara GN=calm PE=2 SV=3[more]
CALM_STYLE6.051e-2192.31Calmodulin OS=Stylonychia lemnae PE=3 SV=2[more]
CALM_PLEOS6.051e-2190.38Calmodulin OS=Pleurotus ostreatus GN=CMD1 PE=2 SV=... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0003_IaF_D11 Mature Albedo Citrus sinensis cDNA clone ALBEDO0003_IaF_D11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610502 ID=CB610502; Name=CB610502; organism=Citrus sinensis; type=EST; length=214bp
GGGCAGAATGGGTTCATTTCTGCTGCTGAACTCCGCCATGTGATGACAAA
TCTTGGTGAGAAGTTGACTGATGAGGAAGTTGATGAGATGATTCGTGAAG
CTGATGTGGATGGTGATGGCCAGATCAATTATGAAGAGTTTGTTAAAGTC
ATGATGGCCAAGTGAGAACCTCTCAACTATCACGCAAAAAAAAAAAAAAA
AAAAAAAAAAAAAA
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