CB610519

Overview
NameCB610519
Unique NameCB610519
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length868
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB610519 vs. ExPASy Swiss-Prot
Match: EF2_PYRWO (Elongation factor 2 OS=Pyrococcus woesei GN=fusA PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 9.813e-21
Identity = 68/214 (31.78%), Postives = 108/214 (50.47%), Query Frame = 1
Query:  250 PMLQKLGV--------TMKSEEKELMGKALMKRVMQTWLPASSALLEMMIFHLPSPATAQKYRVENLYEGPLDDAYANAIRNCDPEGPLMLYVSKMIPASDKGRFFAFGRVFSGKVATGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKKQETVEDVPCGNTVAMVGLDQYITKNATLTNEKEVDAHPIRAXXFSVSPVVRVAVQCKVASDL 867
            P +Q+ GV        T+K + K L  +A          P    +L+M++ HLPSP  AQKYR+ +L++G ++     A+ NCDP+G +++ ++K+I     G   A GRV+SG V +G +V      Y+   K+      +Q+  I+MG ++  +E VP GN VA+ GL   +        + E    P  A  +   PVV VA++ K   DL
Sbjct:  214 PFMQRTGVKFNEIIDLTLKGDNKTLRQRA----------PLHVVVLDMVVRHLPSPIEAQKYRIPHLWQGDINSKIGQAMLNCDPKGKMVMVITKIIIDKHAGE-VATGRVWSGTVRSGQEV------YLINSKRK---GRIQQVGIYMGPERINMEAVPAGNIVAVTGLRDAMAGETVAEEQIE----PFEALHYVSEPVVTVAIEAKNVKDL 403          
BLAST of CB610519 vs. ExPASy Swiss-Prot
Match: EF2_PYRFU (Elongation factor 2 OS=Pyrococcus furiosus GN=fusA PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 9.813e-21
Identity = 68/214 (31.78%), Postives = 108/214 (50.47%), Query Frame = 1
Query:  250 PMLQKLGV--------TMKSEEKELMGKALMKRVMQTWLPASSALLEMMIFHLPSPATAQKYRVENLYEGPLDDAYANAIRNCDPEGPLMLYVSKMIPASDKGRFFAFGRVFSGKVATGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKKQETVEDVPCGNTVAMVGLDQYITKNATLTNEKEVDAHPIRAXXFSVSPVVRVAVQCKVASDL 867
            P +Q+ GV        T+K + K L  +A          P    +L+M++ HLPSP  AQKYR+ +L++G ++     A+ NCDP+G +++ ++K+I     G   A GRV+SG V +G +V      Y+   K+      +Q+  I+MG ++  +E VP GN VA+ GL   +        + E    P  A  +   PVV VA++ K   DL
Sbjct:  214 PFMQRTGVKFNEIIDLTLKGDNKTLRQRA----------PLHVVVLDMVVRHLPSPIEAQKYRIPHLWQGDINSKIGQAMLNCDPKGKMVMVITKIIIDKHAGE-VATGRVWSGTVRSGQEV------YLINSKRK---GRIQQVGIYMGPERINMEAVPAGNIVAVTGLRDAMAGETVAEEQIE----PFEALHYVSEPVVTVAIEAKNVKDL 403          
BLAST of CB610519 vs. ExPASy Swiss-Prot
Match: EF2_PYRHO (Elongation factor 2 OS=Pyrococcus horikoshii GN=fusA PE=3 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 1.674e-20
Identity = 66/201 (32.84%), Postives = 103/201 (51.24%), Query Frame = 1
Query:  265 LGVTMKSEEKELMGKALMKRVMQTWLPASSALLEMMIFHLPSPATAQKYRVENLYEGPLDDAYANAIRNCDPEGPLMLYVSKMIPASDKGRFFAFGRVFSGKVATGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKKQETVEDVPCGNTVAMVGLDQYITKNATLTNEKEVDAHPIRAXXFSVSPVVRVAVQCKVASDL 867
            + +T+K + + L  KA          P    +L+M++ HLPSP  AQKYR+ +L+EG +      A+ NCDP+G +++ V+K+I     G   A GRV+SG V +G +V      Y+   K+      +Q+  I+MG ++  +E VP GN VA+ GL   +        + E    P  A  +   PVV VA++ K   DL
Sbjct:  227 IDLTLKGDNRTLRQKA----------PLHVVVLDMVVRHLPSPIEAQKYRIPHLWEGDISSDIGQAMLNCDPKGKMVMVVTKIIIDKHAGE-VATGRVWSGTVKSGQEV------YLINTKRK---ARIQQVGIYMGPERINMEAVPAGNIVAVTGLRDAMAGETVAEEQIE----PFEALHYVSEPVVTVAIEAKNVKDL 403          
BLAST of CB610519 vs. ExPASy Swiss-Prot
Match: EF2_IGNH4 (Elongation factor 2 OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=fusA PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.729e-20
Identity = 69/224 (30.80%), Postives = 110/224 (49.11%), Query Frame = 1
Query:  214 NICMNDEKDKLW----PMLQKLGVTMKSEEKELMGKALMKRVMQTW--LPASSALLEMMIFHLPSPATAQKYRVENLYEGPLDDAYANAIRNCDPEGPLMLYVSKMIPASDKGRFFAFGRVFSGKVATGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKKQETVEDVPCGNTVAMVGLDQYITKNATLTNEKEVDAHPIRAXXFSVSPVVRVAVQCKVASDL 867
            ++ +   KDK W    PM Q+ G+   S+  E   K     + + +   P    LL+M++  +P+P  AQKYRV  L++G ++     A+ NCDPEGPL+++++ M       R  A GRV++G    G +V ++     PG+        + +  I+MG  +E V+ V  GN VAM+GLD        +    +  A P     +   PVV VA++ K   DL
Sbjct:  199 HVALGSAKDK-WGITIPMAQEKGIKF-SDIVEAYAKGSKDAIEELFHKAPLHETLLDMVVRWVPNPREAQKYRVPRLWKGDINSELGKAMLNCDPEGPLVVFINDMRLDPHTKRLVATGRVWAGTATAGKEVWLVNAQ-KPGK--------ILQVSIYMGPDREIVDYVTAGNIVAMLGLDDARAGETLVDINYKDQAAPFEQLHYVSEPVVTVAIEPKNPRDL 411          
BLAST of CB610519 vs. ExPASy Swiss-Prot
Match: EF2_PYRAB (Elongation factor 2 OS=Pyrococcus abyssi GN=fusA PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.870e-20
Identity = 65/201 (32.34%), Postives = 103/201 (51.24%), Query Frame = 1
Query:  265 LGVTMKSEEKELMGKALMKRVMQTWLPASSALLEMMIFHLPSPATAQKYRVENLYEGPLDDAYANAIRNCDPEGPLMLYVSKMIPASDKGRFFAFGRVFSGKVATGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKKQETVEDVPCGNTVAMVGLDQYITKNATLTNEKEVDAHPIRAXXFSVSPVVRVAVQCKVASDL 867
            + +T+K + K L  KA          P    +L+M++ HLP+P  AQKYR+ +L++G ++     A+ NCDP+G +++ V+K+I     G   A GRV+SG V +G +V      Y+   K+      +Q+  I+MG ++  +E VP GN VA+ GL   +          E    P  A  +   PVV VA++ K   DL
Sbjct:  227 IDLTLKGDHKTLRQKA----------PLHVVVLDMVVKHLPNPIEAQKYRIPHLWQGDINSDVGQAMLNCDPKGKMVMVVTKIIIDKHAGE-VATGRVWSGTVKSGQEV------YLINTKRK---ARIQQVGIYMGPERINMEAVPAGNIVAVTGLRDAMAGETV----AEEPIEPFEALHYVSEPVVTVAIEAKNVKDL 403          
BLAST of CB610519 vs. ExPASy Swiss-Prot
Match: EF2_THESM (Elongation factor 2 OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=fusA PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.085e-19
Identity = 64/206 (31.07%), Postives = 109/206 (52.91%), Query Frame = 1
Query:  250 PMLQKLGVTMKSEEKELMGKALMKRVMQTWLPASSALLEMMIFHLPSPATAQKYRVENLYEGPLDDAYANAIRNCDPEGPLMLYVSKMIPASDKGRFFAFGRVFSGKVATGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKKQETVEDVPCGNTVAMVGLDQYITKNATLTNEKEVDAHPIRAXXFSVSPVVRVAVQCKVASDL 867
            P ++K GV+ K +  +L     +K + +   P    +L+M++ HLP+P  AQKYR+ +L+ G ++     ++ +C+P+G +++ V+K+I     G   A GRV+SG V TG +V I     +  ++K      +Q+  I+MG ++  +E VP GN VA+ GL   +          E    P  A  ++  PVV VA++ K   DL
Sbjct:  214 PYMKKTGVSFK-DIIDLTNAGDLKTLRKK-APLHVVVLDMVVRHLPNPVEAQKYRIPHLWRGEIESEIGQSMASCNPKGKMVMVVTKIIIDKHAGE-VATGRVWSGTVKTGQEVHI-----ITAKRK----ARIQQVGIYMGPERINMEAVPAGNIVAVTGLRDAMAGETV----AEEPIEPFEALHYTSEPVVTVAIEAKNVKDL 403          
BLAST of CB610519 vs. ExPASy Swiss-Prot
Match: EF2_PYRAE (Elongation factor 2 OS=Pyrobaculum aerophilum GN=fusA PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.417e-19
Identity = 68/206 (33.01%), Postives = 102/206 (49.51%), Query Frame = 1
Query:  250 PMLQKLGVTMKSEEKELMGKALMKRVMQTWLPASSALLEMMIFHLPSPATAQKYRVENLYEGPLDDAYANAIRNCDPEGPLMLYVSKMIPASDKGRFFAFGRVFSGKVATGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKKQETVEDVPCGNTVAMVGLDQYITKNATLTNEKEVDAHPIRAXXFSVSPVVRVAVQCKVASDL 867
            PM QK G+   S   +   K  + ++ Q + P    +L M+I H+P P  AQKYR+  L+ G L+     A+   DP GP ++ VSK+      G   A GRVFSG +  G +V I+G             K V +T I+MG  +  V  +P GN VA++G+D+      TL + K  +  P     +   PVV VA++ K  ++L
Sbjct:  218 PMAQKAGIKF-SNIVDAYEKGYVDQLAQEF-PLYKTILSMIIEHIPPPNVAQKYRIPRLWRGELNSEVGKALLEADPNGPTVIAVSKVNKDPHAG-LIATGRVFSGTIREGDEVYIIGRR---------LKKKVLQTYIYMGPSRIIVPYMPAGNIVALMGVDE-ARAGDTLVDPKFSEIPPFEKMRYISEPVVTVAIEPKNPAEL 410          
BLAST of CB610519 vs. ExPASy Swiss-Prot
Match: EF2_PYRIL (Elongation factor 2 OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=fusA PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.851e-19
Identity = 68/206 (33.01%), Postives = 102/206 (49.51%), Query Frame = 1
Query:  250 PMLQKLGVTMKSEEKELMGKALMKRVMQTWLPASSALLEMMIFHLPSPATAQKYRVENLYEGPLDDAYANAIRNCDPEGPLMLYVSKMIPASDKGRFFAFGRVFSGKVATGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKKQETVEDVPCGNTVAMVGLDQYITKNATLTNEKEVDAHPIRAXXFSVSPVVRVAVQCKVASDL 867
            PM QK G+   S   +   K  + ++ Q + P    LL M+I H+P P  AQKYR+  L+ G L+     A+   DP GP ++ VSK+      G     GRVFSG +  G ++      Y+ G K     K V +T I+MG  +  V  +P GN VA++G+D+      TL + +  D  P     +   PVV VA++ K  ++L
Sbjct:  218 PMAQKAGIKF-SNIIDAYEKGYVDQLAQEF-PLYKTLLSMIIEHVPPPNVAQKYRIPRLWRGDLNSEVGKALLEADPNGPTVIAVSKVNKDPHAG-LIVTGRVFSGTIREGDEI------YIIGRKMK---KKVLQTYIYMGPSRIIVPYMPAGNIVALMGVDE-ARAGDTLVDPRISDIPPFEKMRYIAEPVVTVAIEPKNPAEL 410          
BLAST of CB610519 vs. ExPASy Swiss-Prot
Match: EF2_THENV (Elongation factor 2 OS=Thermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta) GN=fusA PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.157e-19
Identity = 68/206 (33.01%), Postives = 103/206 (50.00%), Query Frame = 1
Query:  250 PMLQKLGVTMKSEEKELMGKALMKRVMQTWLPASSALLEMMIFHLPSPATAQKYRVENLYEGPLDDAYANAIRNCDPEGPLMLYVSKMIPASDKGRFFAFGRVFSGKVATGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKKQETVEDVPCGNTVAMVGLDQYITKNATLTNEKEVDAHPIRAXXFSVSPVVRVAVQCKVASDL 867
            PM QK G+   S   +   K  + ++ Q + P    LL M+I H+P P  AQKYR+  L+ G L+     A+   DP GP ++ VSK+      G   A GRVFSG +  G ++      Y+ G K     K V +T I+MG  +  V  +P GN VA++G+D+      TL + +  +  P     +   PVV VA++ K  ++L
Sbjct:  218 PMAQKAGIKF-SNIVDAYEKGYVDQLAQEF-PLYKTLLTMIIEHVPPPNVAQKYRIPRLWRGDLNSEIGKALLEADPNGPTVIAVSKVNKDPHAG-LIATGRVFSGTIREGDEI------YIIGRKMK---KKVLQTYIYMGPSRIIVPYMPAGNIVALMGVDE-ARAGDTLVDPRLSEIPPFEKMRYISEPVVTVAIEPKNPAEL 410          
BLAST of CB610519 vs. ExPASy Swiss-Prot
Match: EF2_PYRCJ (Elongation factor 2 OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=fusA PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.157e-19
Identity = 68/206 (33.01%), Postives = 101/206 (49.03%), Query Frame = 1
Query:  250 PMLQKLGVTMKSEEKELMGKALMKRVMQTWLPASSALLEMMIFHLPSPATAQKYRVENLYEGPLDDAYANAIRNCDPEGPLMLYVSKMIPASDKGRFFAFGRVFSGKVATGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKKQETVEDVPCGNTVAMVGLDQYITKNATLTNEKEVDAHPIRAXXFSVSPVVRVAVQCKVASDL 867
            PM QK G+   S   +   K  + ++ + + P    LL M+I H+P P  AQKYR+  L+ G L+     A+   DP GP ++ VSK+      G   A GRVFSG +  G ++      Y+ G K     K V +T I+MG  +  V  +P GN VA++G+D+      TL      D  P     +   PVV VA++ K  ++L
Sbjct:  218 PMAQKAGIKF-SNIVDAYEKGYVDKLAEEF-PLYKTLLTMIIEHVPPPNVAQKYRIPRLWRGDLNSEVGKALLEADPNGPTVIAVSKVNKDPHAG-LIATGRVFSGTIREGDEI------YIIGRKMK---KKVLQTYIYMGPTRIIVPYMPAGNIVALMGVDE-ARAGDTLVTPSLADIPPFERMRYISEPVVTVAIEPKNPAEL 410          
The following BLAST results are available for this feature:
BLAST of CB610519 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 99
Match NameE-valueIdentityDescription
EF2_PYRWO9.813e-2131.78Elongation factor 2 OS=Pyrococcus woesei GN=fusA P... [more]
EF2_PYRFU9.813e-2131.78Elongation factor 2 OS=Pyrococcus furiosus GN=fusA... [more]
EF2_PYRHO1.674e-2032.84Elongation factor 2 OS=Pyrococcus horikoshii GN=fu... [more]
EF2_IGNH43.729e-2030.80Elongation factor 2 OS=Ignicoccus hospitalis (stra... [more]
EF2_PYRAB4.870e-2032.34Elongation factor 2 OS=Pyrococcus abyssi GN=fusA P... [more]
EF2_THESM1.085e-1931.07Elongation factor 2 OS=Thermococcus sibiricus (str... [more]
EF2_PYRAE1.417e-1933.01Elongation factor 2 OS=Pyrobaculum aerophilum GN=f... [more]
EF2_PYRIL1.851e-1933.01Elongation factor 2 OS=Pyrobaculum islandicum (str... [more]
EF2_THENV3.157e-1933.01Elongation factor 2 OS=Thermoproteus neutrophilus ... [more]
EF2_PYRCJ3.157e-1933.01Elongation factor 2 OS=Pyrobaculum calidifontis (s... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0003_IaF_A10 Mature Albedo Citrus sinensis cDNA clone ALBEDO0003_IaF_A10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610519 ID=CB610519; Name=CB610519; organism=Citrus sinensis; type=EST; length=868bp
GGGGGTTTGCATGGTTGGGCTTTTACCTTGACAAATTTTGCTAAGATGTA
TGCATCCAAGTTCGGAGTTGATGAGTCAAAGATGATGGAGAGGCTCTGGG
GTGAGAACTTCTTTGACCCTGCTACAAGGAAGTGGACCAGCAGGAACACT
GGCTCTCCCACTTGCAAGCGTGGTTTTGTCCAGTTCTGCTATGAACCCAT
CAAGCAGATCATCAACATTTGCATGAATGATGAGAAAGATAAGCTGTGGC
CTATGTTACAAAAGCTTGGTGTCACAATGAAGTCGGAAGAAAAGGAGTTG
ATGGGTAAGGCATTGATGAAGCGTGTGATGCAGACCTGGCTCCCTGCAAG
TAGTGCTCTTCTGGAAATGATGATCTTTCACCTTCCCTCTCCTGCCACGG
CCCAAAAGTACCGTGTTGAGAACTTGTATGAGGGTCCCCTTGATGATGCT
TATGCTAATGCCATCAGGAACTGTGATCCCGAGGGCCCTCTCATGCTCTA
TGTATCTAAGATGATTCCTGCGTCTGATAAGGGTAGATTCTTTGCTTTTG
GTCGTGTGTTCTCTGGCAAGGTTGCAACTGGTTTGAAGGTCAGGATCATG
GGTCCTAACTATGTCCCTGGTGAGAAGAAAGACTTGTATGTGAAGAGTGT
ACAAAGGACTGTTATTTGGATGGGAAAGAAGCAGGAAACTGTAGAGGATG
TGCCTTGTGGCAATACGGTCGCCATGGTTGGTTTGGATCAGTATATCACC
AAGAATGCTACCTTGACAAACGAGAAGGAAGTTGATGCCCATCCTATCCG
TGCTATNNAGTTCTCCGTCTCACCTGTGGTTCGTGTGGCTGTACAGTGCA
AAGTTGCATCTGATCTCC
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