CB610519

Overview
NameCB610519
Unique NameCB610519
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length868
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB610519 vs. ExPASy Swiss-Prot
Match: EF2_PYRAR (Elongation factor 2 OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=fusA PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.385e-19
Identity = 68/206 (33.01%), Postives = 103/206 (50.00%), Query Frame = 1
Query:  250 PMLQKLGVTMKSEEKELMGKALMKRVMQTWLPASSALLEMMIFHLPSPATAQKYRVENLYEGPLDDAYANAIRNCDPEGPLMLYVSKMIPASDKGRFFAFGRVFSGKVATGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKKQETVEDVPCGNTVAMVGLDQYITKNATLTNEKEVDAHPIRAXXFSVSPVVRVAVQCKVASDL 867
            PM QK G+   S   +   K  + ++ + + P    LL M+I H+P P  AQKYR+  L+ G L+     A+   DP GP ++ VSK+      G   A GRVFSG +  G +V      Y+ G K     K V +T I+MG  +  V  +P GN VA++G+D+      TL + +  +  P     +   PVV VA++ K  ++L
Sbjct:  218 PMAQKAGLKF-SNIVDAYEKGYVDKLGEEF-PLYKTLLTMIIEHVPPPNVAQKYRIPRLWRGDLNSEVGKAMLEADPNGPTVIAVSKVNKDPHAG-LIATGRVFSGTIREGDEV------YIIGRKMK---KKVLQTYIYMGPTRIIVPYMPAGNIVALMGVDE-ARAGDTLVDPRLTEVPPFEKMRYIAEPVVTVAIEPKNPAEL 410          
BLAST of CB610519 vs. ExPASy Swiss-Prot
Match: EF2_METKA (Elongation factor 2 OS=Methanopyrus kandleri GN=fusA PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 9.185e-19
Identity = 67/215 (31.16%), Postives = 103/215 (47.91%), Query Frame = 1
Query:  247 WPMLQKLGVTMKS--------EEKELMGKALMKRVMQTWLPASSALLEMMIFHLPSPATAQKYRVENLYEGPLDDAYANAIRNCDPEGPLMLYVSKMIPASDKGRFFAFGRVFSGKVATGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKKQETVEDVPCGNTVAMVGLDQYITKNATLTNEKEVDAHPIRAXXFSVSPVVRVAVQCKVASDL 867
            +P ++K G+T K         ++KEL  +A          P    +L+M++ HLP P TAQ+YR+E ++ G  +      +R CDP G L + V+ +      G   A GRV+SG +  G +V      Y+   KK+     VQ+  I+MG  +   ++VP GN  A+ GL + +    T+T + E    P         PVV VAV+ K   DL
Sbjct:  735 FPFMEKTGITFKDIIEYCQQDKQKELAQEA----------PVYQVVLDMVVKHLPDPVTAQEYRIEQIWPGDPESEDGKTLRKCDPNGKLAMVVTDVRIDEHAGE-VATGRVYSGTIREGQQV------YLASSKKE---TRVQQVGIYMGPDRIRTDEVPAGNIAAVTGL-RDVWAGETVT-DPEDPIEPFEELQHFAEPVVTVAVEAKNTQDL 927          
BLAST of CB610519 vs. ExPASy Swiss-Prot
Match: EF2_METJA (Elongation factor 2 OS=Methanocaldococcus jannaschii GN=fusA PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 9.185e-19
Identity = 65/214 (30.37%), Postives = 106/214 (49.53%), Query Frame = 1
Query:  250 PMLQKLGVTMKS--------EEKELMGKALMKRVMQTWLPASSALLEMMIFHLPSPATAQKYRVENLYEGPLDDAYANAIRNCDPEGPLMLYVSKMIPASDKGRFFAFGRVFSGKVATGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKKQETVEDVPCGNTVAMVGLDQYITKNATLTNEKEVDAHPIRAXXFSVSPVVRVAVQCKVASDL 867
            P ++K G+T K          + EL  KA          P    +L+M+I HLPSP  AQKYR+ +L++G L+     A+ NCDP GPL   ++K+I     G   +  R+FSG++  G +V +     V  ++K      +Q+  ++MG ++  V+ +  GN  A+VGL +        + +K ++  P  A      PV+ VA++ K   DL
Sbjct:  214 PFMKKSGITFKDIIKYCEEDRQDELAEKA----------PLHEVVLDMVIKHLPSPPEAQKYRIPHLWKGDLNSEAGKAMLNCDPNGPLAGVITKIIVDKHAGA-VSVCRLFSGRIKQGDEVYM-----VNNQQK----AKIQQVSVFMGPERIPVDSISAGNICALVGLKEASAGETICSPDKIIE--PFEAITHISEPVITVAIEAKNTKDL 405          
BLAST of CB610519 vs. ExPASy Swiss-Prot
Match: EF2_SULTO (Elongation factor 2 OS=Sulfolobus tokodaii GN=fusA PE=3 SV=3)

HSP 1 Score: 93.9745 bits (232), Expect = 1.200e-18
Identity = 70/224 (31.25%), Postives = 106/224 (47.32%), Query Frame = 1
Query:  214 NICMNDEKDKLW----PMLQKLGVTMKSEEKELM-GKALMKRVMQTWLPASSALLEMMIFHLPSPATAQKYRVENLYEGPLDDAYANAIRNCDPEGPLMLYVSKMIPASDKGRFFAFGRVFSGKVATGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKKQETVEDVPCGNTVAMVGLDQYIT-KNATLTNEKEVDAHPIRAXXFSVSPVVRVAVQCKVASDL 867
            N+     KDK W    P+ QK GV           G       +   +P   ALLE +I  +P+P  AQKYR+  +++G LD   A A+ N DP GP++L +S M      G   A GRVFSG +  G ++      ++   K+   V  V    ++MG  +E  E++P GN  A +GLDQ  + + A     K+ +     +  +   PVV ++V+ K   DL
Sbjct:  198 NVVFGSAKDK-WGFSVPIAQKKGVKFSDVVNAYSSGDKSKVEELANRVPIHEALLETVIKFVPNPRDAQKYRIPKIWKGDLDSDIAKAMINADPNGPIVLMISDMKVDPHAG-LVATGRVFSGTLRAGEEI------WLVNAKRQQRVLQVS---LYMGPTRELAEEIPAGNIAAALGLDQARSGETAVDIKYKDANVGSFESLHYVSEPVVTISVEPKNPKDL 410          
BLAST of CB610519 vs. ExPASy Swiss-Prot
Match: EF2_ARCFU (Elongation factor 2 OS=Archaeoglobus fulgidus GN=fusA PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.200e-18
Identity = 62/209 (29.67%), Postives = 105/209 (50.24%), Query Frame = 1
Query:  250 PMLQKLGVTMKS---EEKELMGKALMKRVMQTWLPASSALLEMMIFHLPSPATAQKYRVENLYEGPLDDAYANAIRNCDPEGPLMLYVSKMIPASDKGRFFAFGRVFSGKVATGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKKQETVEDVPCGNTVAMVGLDQYITKNATLTNEKEVDAHPIRAXXFSVSPVVRVAVQCKVASDL 867
            P  +K G+  K      KE   K L K+      P    +L+M+I HLPSP  AQK R+  +++G ++     A+ NCDP+GP+ L ++K++     G   A GR++SG +  G+++      Y+   K       +Q   ++MG ++  V+++P GN VA++GL   +  +   T E   +  P  +      PVV +A++ K   DL
Sbjct:  212 PSQKKTGIGFKEVYEHIKEGKVKELAKKS-----PLYQVVLDMVIRHLPSPIEAQKERIAVIWKGDINSEVGKAMVNCDPKGPVALMITKIVVEPQAGE-IAVGRLYSGTIRPGMEL------YIVDRKAK---NRIQTVGLYMGPRRVEVDEIPAGNIVAVIGLKDAVAGSTCTTVE---NLTPFESIKHYSEPVVTMAIEAKNPRDL 402          
BLAST of CB610519 vs. ExPASy Swiss-Prot
Match: EF2_SULSO (Elongation factor 2 OS=Sulfolobus solfataricus GN=fusA PE=1 SV=3)

HSP 1 Score: 92.0485 bits (227), Expect = 4.559e-18
Identity = 67/226 (29.65%), Postives = 107/226 (47.35%), Query Frame = 1
Query:  214 NICMNDEKDKLW----PMLQKLGVTMKSEEKELMGKALMK-RVMQTWLPASSALLEMMIFHLPSPATAQKYRVENLYEGPLDDAYANAIRNCDPEGPLMLYVSKMIPASDKGRFFAFGRVFSGKVATGLKVRIMGPNYVPGEKKDLYVKSVQRTV---IWMGKKQETVEDVPCGNTVAMVGLDQYITKNATLTNEKEVDAHPIRAXXFSVSPVVRVAVQCKVASDL 867
            N+     KDK W    PM QK G+ MK+           K   +    P + ALL+  I  +P+P  AQKYR+  +++G LD+  A A+ N DP GP++  ++ M      G   A GRVFSG + +G ++ ++              K+ QR +   ++MG  +E  E++P GN  A++GLD+  +    ++              +   PVV +AV+ K   DL
Sbjct:  198 NVIFGSAKDK-WGFSLPMAQKKGINMKNVIDAYTASDKSKLEELAAQAPINEALLDAAIKFVPNPIEAQKYRIPKIWKGDLDNELAKAMLNADPNGPIVFMITDMKVDPHAG-LVATGRVFSGTLRSGEELWLVN------------AKTSQRILQVSLYMGPTRELAEEIPAGNIAAVLGLDRARSGETAISVGFSNVQGSFERLHYISEPVVTIAVEPKNPKDL 409          
BLAST of CB610519 vs. ExPASy Swiss-Prot
Match: EF2_SULIY (Elongation factor 2 OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=fusA PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.559e-18
Identity = 67/226 (29.65%), Postives = 107/226 (47.35%), Query Frame = 1
Query:  214 NICMNDEKDKLW----PMLQKLGVTMKSEEKELMGKALMK-RVMQTWLPASSALLEMMIFHLPSPATAQKYRVENLYEGPLDDAYANAIRNCDPEGPLMLYVSKMIPASDKGRFFAFGRVFSGKVATGLKVRIMGPNYVPGEKKDLYVKSVQRTV---IWMGKKQETVEDVPCGNTVAMVGLDQYITKNATLTNEKEVDAHPIRAXXFSVSPVVRVAVQCKVASDL 867
            N+     KDK W    PM QK G+ MK+           K   +    P + ALL+  I  +P+P  AQKYR+  +++G LD+  A A+ N DP GP++  ++ M      G   A GRVFSG + +G ++ ++              K+ QR +   ++MG  +E  E++P GN  A++GLD+  +    ++              +   PVV +AV+ K   DL
Sbjct:  198 NVIFGSAKDK-WGFSLPMAQKKGINMKNVIDAYTASDKSKLEELAAQAPINEALLDAAIKFVPNPIEAQKYRIPKIWKGDLDNELAKAMLNADPNGPIVFMITDMKVDPHAG-LVATGRVFSGTLRSGEELWLVN------------AKTSQRILQVSLYMGPTRELAEEIPAGNIAAVLGLDRARSGETAISVGFSNVQGSFERLHYISEPVVTIAVEPKNPKDL 409          
BLAST of CB610519 vs. ExPASy Swiss-Prot
Match: EF2_SULIN (Elongation factor 2 OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=fusA PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.559e-18
Identity = 67/226 (29.65%), Postives = 107/226 (47.35%), Query Frame = 1
Query:  214 NICMNDEKDKLW----PMLQKLGVTMKSEEKELMGKALMK-RVMQTWLPASSALLEMMIFHLPSPATAQKYRVENLYEGPLDDAYANAIRNCDPEGPLMLYVSKMIPASDKGRFFAFGRVFSGKVATGLKVRIMGPNYVPGEKKDLYVKSVQRTV---IWMGKKQETVEDVPCGNTVAMVGLDQYITKNATLTNEKEVDAHPIRAXXFSVSPVVRVAVQCKVASDL 867
            N+     KDK W    PM QK G+ MK+           K   +    P + ALL+  I  +P+P  AQKYR+  +++G LD+  A A+ N DP GP++  ++ M      G   A GRVFSG + +G ++ ++              K+ QR +   ++MG  +E  E++P GN  A++GLD+  +    ++              +   PVV +AV+ K   DL
Sbjct:  198 NVIFGSAKDK-WGFSLPMAQKKGINMKNVIDAYTASDKSKLEELAAQAPINEALLDAAIKFVPNPIEAQKYRIPKIWKGDLDNELAKAMLNADPNGPIVFMITDMKVDPHAG-LVATGRVFSGTLRSGEELWLVN------------AKTSQRILQVSLYMGPTRELAEEIPAGNIAAVLGLDRARSGETAISVGFSNVQGSFERLHYISEPVVTIAVEPKNPKDL 409          
BLAST of CB610519 vs. ExPASy Swiss-Prot
Match: EF2_SULIM (Elongation factor 2 OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=fusA PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.559e-18
Identity = 67/226 (29.65%), Postives = 107/226 (47.35%), Query Frame = 1
Query:  214 NICMNDEKDKLW----PMLQKLGVTMKSEEKELMGKALMK-RVMQTWLPASSALLEMMIFHLPSPATAQKYRVENLYEGPLDDAYANAIRNCDPEGPLMLYVSKMIPASDKGRFFAFGRVFSGKVATGLKVRIMGPNYVPGEKKDLYVKSVQRTV---IWMGKKQETVEDVPCGNTVAMVGLDQYITKNATLTNEKEVDAHPIRAXXFSVSPVVRVAVQCKVASDL 867
            N+     KDK W    PM QK G+ MK+           K   +    P + ALL+  I  +P+P  AQKYR+  +++G LD+  A A+ N DP GP++  ++ M      G   A GRVFSG + +G ++ ++              K+ QR +   ++MG  +E  E++P GN  A++GLD+  +    ++              +   PVV +AV+ K   DL
Sbjct:  198 NVIFGSAKDK-WGFSLPMAQKKGINMKNVIDAYTASDKSKLEELAAQAPINEALLDAAIKFVPNPIEAQKYRIPKIWKGDLDNELAKAMLNADPNGPIVFMITDMKVDPHAG-LVATGRVFSGTLRSGEELWLVN------------AKTSQRILQVSLYMGPTRELAEEIPAGNIAAVLGLDRARSGETAISVGFSNVQGSFERLHYISEPVVTIAVEPKNPKDL 409          
BLAST of CB610519 vs. ExPASy Swiss-Prot
Match: EF2_SULIL (Elongation factor 2 OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=fusA PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.559e-18
Identity = 67/226 (29.65%), Postives = 107/226 (47.35%), Query Frame = 1
Query:  214 NICMNDEKDKLW----PMLQKLGVTMKSEEKELMGKALMK-RVMQTWLPASSALLEMMIFHLPSPATAQKYRVENLYEGPLDDAYANAIRNCDPEGPLMLYVSKMIPASDKGRFFAFGRVFSGKVATGLKVRIMGPNYVPGEKKDLYVKSVQRTV---IWMGKKQETVEDVPCGNTVAMVGLDQYITKNATLTNEKEVDAHPIRAXXFSVSPVVRVAVQCKVASDL 867
            N+     KDK W    PM QK G+ MK+           K   +    P + ALL+  I  +P+P  AQKYR+  +++G LD+  A A+ N DP GP++  ++ M      G   A GRVFSG + +G ++ ++              K+ QR +   ++MG  +E  E++P GN  A++GLD+  +    ++              +   PVV +AV+ K   DL
Sbjct:  198 NVIFGSAKDK-WGFSLPMAQKKGINMKNVIDAYTASDKSKLEELAAQAPINEALLDAAIKFVPNPIEAQKYRIPKIWKGDLDNELAKAMLNADPNGPIVFMITDMKVDPHAG-LVATGRVFSGTLRSGEELWLVN------------AKTSQRILQVSLYMGPTRELAEEIPAGNIAAVLGLDRARSGETAISVGFSNVQGSFERLHYISEPVVTIAVEPKNPKDL 409          
The following BLAST results are available for this feature:
BLAST of CB610519 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 99
Match NameE-valueIdentityDescription
EF2_PYRAR5.385e-1933.01Elongation factor 2 OS=Pyrobaculum arsenaticum (st... [more]
EF2_METKA9.185e-1931.16Elongation factor 2 OS=Methanopyrus kandleri GN=fu... [more]
EF2_METJA9.185e-1930.37Elongation factor 2 OS=Methanocaldococcus jannasch... [more]
EF2_SULTO1.200e-1831.25Elongation factor 2 OS=Sulfolobus tokodaii GN=fusA... [more]
EF2_ARCFU1.200e-1829.67Elongation factor 2 OS=Archaeoglobus fulgidus GN=f... [more]
EF2_SULSO4.559e-1829.65Elongation factor 2 OS=Sulfolobus solfataricus GN=... [more]
EF2_SULIY4.559e-1829.65Elongation factor 2 OS=Sulfolobus islandicus (stra... [more]
EF2_SULIN4.559e-1829.65Elongation factor 2 OS=Sulfolobus islandicus (stra... [more]
EF2_SULIM4.559e-1829.65Elongation factor 2 OS=Sulfolobus islandicus (stra... [more]
EF2_SULIL4.559e-1829.65Elongation factor 2 OS=Sulfolobus islandicus (stra... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0003_IaF_A10 Mature Albedo Citrus sinensis cDNA clone ALBEDO0003_IaF_A10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610519 ID=CB610519; Name=CB610519; organism=Citrus sinensis; type=EST; length=868bp
GGGGGTTTGCATGGTTGGGCTTTTACCTTGACAAATTTTGCTAAGATGTA
TGCATCCAAGTTCGGAGTTGATGAGTCAAAGATGATGGAGAGGCTCTGGG
GTGAGAACTTCTTTGACCCTGCTACAAGGAAGTGGACCAGCAGGAACACT
GGCTCTCCCACTTGCAAGCGTGGTTTTGTCCAGTTCTGCTATGAACCCAT
CAAGCAGATCATCAACATTTGCATGAATGATGAGAAAGATAAGCTGTGGC
CTATGTTACAAAAGCTTGGTGTCACAATGAAGTCGGAAGAAAAGGAGTTG
ATGGGTAAGGCATTGATGAAGCGTGTGATGCAGACCTGGCTCCCTGCAAG
TAGTGCTCTTCTGGAAATGATGATCTTTCACCTTCCCTCTCCTGCCACGG
CCCAAAAGTACCGTGTTGAGAACTTGTATGAGGGTCCCCTTGATGATGCT
TATGCTAATGCCATCAGGAACTGTGATCCCGAGGGCCCTCTCATGCTCTA
TGTATCTAAGATGATTCCTGCGTCTGATAAGGGTAGATTCTTTGCTTTTG
GTCGTGTGTTCTCTGGCAAGGTTGCAACTGGTTTGAAGGTCAGGATCATG
GGTCCTAACTATGTCCCTGGTGAGAAGAAAGACTTGTATGTGAAGAGTGT
ACAAAGGACTGTTATTTGGATGGGAAAGAAGCAGGAAACTGTAGAGGATG
TGCCTTGTGGCAATACGGTCGCCATGGTTGGTTTGGATCAGTATATCACC
AAGAATGCTACCTTGACAAACGAGAAGGAAGTTGATGCCCATCCTATCCG
TGCTATNNAGTTCTCCGTCTCACCTGTGGTTCGTGTGGCTGTACAGTGCA
AAGTTGCATCTGATCTCC
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