CB610537

Overview
NameCB610537
Unique NameCB610537
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length632
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB610537 vs. ExPASy Swiss-Prot
Match: PROF1_PHAVU (Profilin-1 OS=Phaseolus vulgaris PE=1 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 4.742e-52
Identity = 94/131 (71.76%), Postives = 109/131 (83.21%), Query Frame = 2
Query:   92 MSWQTYVDDHLMCDIDGHHLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXXQALIFGIYDEPLTPGQCNMIVERLGDYLIDQGL 484
            MSWQTYVDDHL+C+I+G+HLT AAI+G DGSVWA+S++FPQFKPEEI  IM DF EPG+LAPTGL++GGTKYMVIQGEPG+VIR               AL+ GIYDEP+TPGQCNMIVERLGDYLI+QGL
Sbjct:    1 MSWQTYVDDHLLCEIEGNHLTHAAILGQDGSVWAKSASFPQFKPEEITGIMNDFNEPGTLAPTGLYIGGTKYMVIQGEPGSVIRGKKGPGGVTVKKTNLALVIGIYDEPMTPGQCNMIVERLGDYLIEQGL 131          
BLAST of CB610537 vs. ExPASy Swiss-Prot
Match: PROF_APIGR (Profilin OS=Apium graveolens PE=1 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 6.193e-52
Identity = 97/134 (72.39%), Postives = 109/134 (81.34%), Query Frame = 2
Query:   92 MSWQTYVDDHLMCDIDGHH---LTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXXQALIFGIYDEPLTPGQCNMIVERLGDYLIDQGL 484
            MSWQ YVDDHLMC+++G+    LT+AAI+GHDGSVWAQSS FPQ KPEEIA IMKDF+EPG LAPTGL+LGG KYMVIQGEP AVIR              QAL+FG+YDEP+TPGQCN+IVERLGDYLIDQGL
Sbjct:    1 MSWQAYVDDHLMCEVEGNPGQTLTAAAIIGHDGSVWAQSSTFPQIKPEEIAGIMKDFDEPGHLAPTGLYLGGAKYMVIQGEPNAVIRGKKGSGGVTIKKTGQALVFGVYDEPVTPGQCNVIVERLGDYLIDQGL 134          
BLAST of CB610537 vs. ExPASy Swiss-Prot
Match: PROF5_MAIZE (Profilin-5 OS=Zea mays GN=PRO5 PE=1 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 6.193e-52
Identity = 92/130 (70.77%), Postives = 107/130 (82.31%), Query Frame = 2
Query:   92 MSWQTYVDDHLMCDIDGHHLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXXQALIFGIYDEPLTPGQCNMIVERLGDYLIDQG 481
            MSWQ YVDDHL+CDI+G HL++AAIVGHDGSVWAQS NFP+ KPEE+A ++KDF+EPG+LAPTGL +GGTKYMVIQGEPG VIR               +LI GIYDEP+TPGQCNM+VERLGDYLI+QG
Sbjct:    1 MSWQAYVDDHLLCDIEGQHLSAAAIVGHDGSVWAQSENFPELKPEEVAGMIKDFDEPGTLAPTGLFVGGTKYMVIQGEPGVVIRGKKGTGGITIKKTGMSLIIGIYDEPMTPGQCNMVVERLGDYLIEQG 130          
BLAST of CB610537 vs. ExPASy Swiss-Prot
Match: PROF3_OLEEU (Profilin-3 OS=Olea europaea GN=PRO3 PE=1 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 6.193e-52
Identity = 97/134 (72.39%), Postives = 107/134 (79.85%), Query Frame = 2
Query:   92 MSWQTYVDDHLMCDIDGHH---LTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXXQALIFGIYDEPLTPGQCNMIVERLGDYLIDQGL 484
            MSWQ YVDDHLMCDI+GH    LT+AAIVGHDGSVWAQS+ FPQFKPEE+  IM DF EPG LAPTGLHLGGTKYMVIQGE GAVIR              QAL+FGIY+EP+TPGQCNM+ ERLGDYL++QGL
Sbjct:    1 MSWQAYVDDHLMCDIEGHEGHRLTAAAIVGHDGSVWAQSATFPQFKPEEMNGIMTDFNEPGHLAPTGLHLGGTKYMVIQGEAGAVIRGKKGSGGITIKKTGQALVFGIYEEPVTPGQCNMVAERLGDYLLEQGL 134          
BLAST of CB610537 vs. ExPASy Swiss-Prot
Match: PROF_MERAN (Profilin OS=Mercurialis annua PE=1 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 8.088e-52
Identity = 95/133 (71.43%), Postives = 109/133 (81.95%), Query Frame = 2
Query:   92 MSWQTYVDDHLMCDIDGH--HLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXXQALIFGIYDEPLTPGQCNMIVERLGDYLIDQGL 484
            MSWQTYVDDHLMCDIDG   HL +A+IVGHDGS+WAQS++FPQ KPEEI  IMKDF+EPG LAPTGL++ GTKYMVIQGE GAVIR              QAL+FGIY+EP+TPGQCNM+VERLGDYLI+QG+
Sbjct:    1 MSWQTYVDDHLMCDIDGQGQHLAAASIVGHDGSIWAQSASFPQLKPEEITGIMKDFDEPGHLAPTGLYIAGTKYMVIQGESGAVIRGKKGSGGITIKKTGQALVFGIYEEPVTPGQCNMVVERLGDYLIEQGM 133          
BLAST of CB610537 vs. ExPASy Swiss-Prot
Match: PROF_DAUCA (Profilin OS=Daucus carota PE=1 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.056e-51
Identity = 96/134 (71.64%), Postives = 111/134 (82.84%), Query Frame = 2
Query:   92 MSWQTYVDDHLMCDIDGH---HLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXXQALIFGIYDEPLTPGQCNMIVERLGDYLIDQGL 484
            MSWQTYVDDHLMC++DG+    L++AAI+GHDGSVWAQSS FP+FKPEEI  IMK+F+EPG LAPTGL+LGGTKYMVIQGEP AVIR              QAL+FG+YDEP+TPGQCN+IVERLGDYLI+QGL
Sbjct:    1 MSWQTYVDDHLMCEVDGNPGQQLSAAAIIGHDGSVWAQSSTFPKFKPEEITGIMKNFDEPGHLAPTGLYLGGTKYMVIQGEPIAVIRGKKGSGGVTIKKTGQALVFGVYDEPVTPGQCNLIVERLGDYLIEQGL 134          
BLAST of CB610537 vs. ExPASy Swiss-Prot
Match: PROF2_AMBAR (Profilin-2 OS=Ambrosia artemisiifolia GN=A0418 PE=1 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 1.380e-51
Identity = 94/130 (72.31%), Postives = 105/130 (80.77%), Query Frame = 2
Query:   92 MSWQTYVDDHLMCDIDGHHLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXXQALIFGIYDEPLTPGQCNMIVERLGDYLIDQG 481
            MSWQ YVDDHLMC+I+G+HL++AAI+GHDG VWAQS+ FPQ KPEEI  IM DF EPGSLAPTGL+LGGTKYMVIQGEPGAVIR               ALI GIYDEP+ PGQCNMIVERLGDYL++QG
Sbjct:    1 MSWQAYVDDHLMCEIEGNHLSAAAIIGHDGVVWAQSATFPQVKPEEITGIMNDFNEPGSLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTTMALIIGIYDEPMAPGQCNMIVERLGDYLLEQG 130          
BLAST of CB610537 vs. ExPASy Swiss-Prot
Match: PROF1_SOLLC (Profilin-1 OS=Solanum lycopersicum GN=PRO1 PE=2 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 1.380e-51
Identity = 96/132 (72.73%), Postives = 108/132 (81.82%), Query Frame = 2
Query:   92 MSWQTYVDDHLMCDIDG--HHLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXXQALIFGIYDEPLTPGQCNMIVERLGDYLIDQG 481
            MSWQTYVDDHLMCDI+G  HHL+SAAI+G DGSVWAQS NFP+FK EEI  IMKDF+EPG LAPTGL L GTKYMVIQGEPGAVIR              QALIFG+Y+EP+TPGQCNM+VE++GDYL+DQG
Sbjct:    1 MSWQTYVDDHLMCDIEGTGHHLSSAAILGFDGSVWAQSPNFPKFKAEEITNIMKDFDEPGHLAPTGLFLAGTKYMVIQGEPGAVIRGKKGPGGITIKKTAQALIFGVYEEPVTPGQCNMVVEKIGDYLVDQG 132          
BLAST of CB610537 vs. ExPASy Swiss-Prot
Match: PROF3_PHLPR (Profilin-3 OS=Phleum pratense GN=PRO3 PE=1 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 2.353e-51
Identity = 91/131 (69.47%), Postives = 106/131 (80.92%), Query Frame = 2
Query:   92 MSWQTYVDDHLMCDIDGHHLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXXQALIFGIYDEPLTPGQCNMIVERLGDYLIDQGL 484
            MSWQTYVD+HLMC+I+GHHL SAAI GHDG+VWAQS++FPQFKPEEI  IMKD +EPG LAPTG+ +   KYMVIQGEPGAVIR              QAL+ GIYDEP+TPGQCNM+VERLGDYL++QG+
Sbjct:    1 MSWQTYVDEHLMCEIEGHHLASAAIFGHDGTVWAQSADFPQFKPEEITGIMKDLDEPGHLAPTGMFVAAAKYMVIQGEPGAVIRGKKGAGGITIKKTGQALVVGIYDEPMTPGQCNMVVERLGDYLVEQGM 131          
BLAST of CB610537 vs. ExPASy Swiss-Prot
Match: PROF1_CITSI (Profilin OS=Citrus sinensis PE=1 SV=2)

HSP 1 Score: 201.83 bits (512), Expect = 2.353e-51
Identity = 97/131 (74.05%), Postives = 108/131 (82.44%), Query Frame = 2
Query:   92 MSWQTYVDDHLMCDIDGHHLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXXQALIFGIYDEPLTPGQCNMIVERLGDYLIDQGL 484
            MSWQ YVDDHLMCDIDG+ LT+AAI+G DGSVW+QS+ FP F+ EEIAAI+KDF++PG+LAPTGL LGGTKYMVIQGE GAVIR              QALI GIYDEPLTPGQCNMIVERLGDYLI+QGL
Sbjct:    1 MSWQAYVDDHLMCDIDGNRLTAAAILGQDGSVWSQSATFPAFRLEEIAAILKDFDQPGTLAPTGLFLGGTKYMVIQGEAGAVIRGKKGSGGIIVKKTNQALIIGIYDEPLTPGQCNMIVERLGDYLIEQGL 131          
The following BLAST results are available for this feature:
BLAST of CB610537 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 84
Match NameE-valueIdentityDescription
PROF1_PHAVU4.742e-5271.76Profilin-1 OS=Phaseolus vulgaris PE=1 SV=1[more]
PROF_APIGR6.193e-5272.39Profilin OS=Apium graveolens PE=1 SV=1[more]
PROF5_MAIZE6.193e-5270.77Profilin-5 OS=Zea mays GN=PRO5 PE=1 SV=1[more]
PROF3_OLEEU6.193e-5272.39Profilin-3 OS=Olea europaea GN=PRO3 PE=1 SV=1[more]
PROF_MERAN8.088e-5271.43Profilin OS=Mercurialis annua PE=1 SV=1[more]
PROF_DAUCA1.056e-5171.64Profilin OS=Daucus carota PE=1 SV=1[more]
PROF2_AMBAR1.380e-5172.31Profilin-2 OS=Ambrosia artemisiifolia GN=A0418 PE=... [more]
PROF1_SOLLC1.380e-5172.73Profilin-1 OS=Solanum lycopersicum GN=PRO1 PE=2 SV... [more]
PROF3_PHLPR2.353e-5169.47Profilin-3 OS=Phleum pratense GN=PRO3 PE=1 SV=1[more]
PROF1_CITSI2.353e-5174.05Profilin OS=Citrus sinensis PE=1 SV=2[more]

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Properties
Property NameValue
Genbank descriptionALBEDO0003_IVaF_F07 Mature Albedo Citrus sinensis cDNA clone ALBEDO0003_IVaF_F07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610537 ID=CB610537; Name=CB610537; organism=Citrus sinensis; type=EST; length=632bp
GGGGGGAGCAAACAACGATAACGAGGGGAAGGAATTAACATAGGAATTAA
ACAAACAATTGAATTTGCCGTGAGACTTTAGATTGTTGAAAATGTCGTGG
CAAACATACGTTGATGATCATCTGATGTGCGATATCGACGGCCATCATCT
CACCTCAGCTGCGATCGTCGGTCACGACGGCAGCGTTTGGGCCCAGAGCT
CCAATTTCCCTCAGTTCAAGCCTGAAGAGATTGCTGCAATCATGAAAGAT
TTTGAAGAGCCCGGTTCTCTTGCCCCAACTGGTTTGCACCTTGGAGGCAC
CAAGTACATGGTAATCCAGGGTGAGCCTGGAGCTGTGATTCGTGGAAAAA
AGGGTTCTGGTGGTGTCACCGTCAAGAAAACGAGCCAAGCCCTGATTTTT
GGTATATACGATGAACCATTGACTCCAGGACAGTGCAACATGATCGTTGA
GAGGTTGGGGGATTATCTCATTGATCAGGGCCTGTAGATCCCATGTCAAC
TTCAAATGGTTTCGATATATTGCTTTCTGGTTTTCGGGCTTTGCCTCTTC
TTCCATATTTGGTCTTGAACTGGCAGTATAAATTTGTTTGCTGCAAAAAT
AACTGTGTGAGGACGAGAGTGATTTTTTTTTC
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