CB610537

Overview
NameCB610537
Unique NameCB610537
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length632
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB610537 vs. ExPASy Swiss-Prot
Match: PROF_HELAN (Profilin OS=Helianthus annuus PE=1 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 1.336e-46
Identity = 86/133 (64.66%), Postives = 105/133 (78.95%), Query Frame = 2
Query:   92 MSWQTYVDDHLMCDIDG--HHLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXXQALIFGIYDEPLTPGQCNMIVERLGDYLIDQGL 484
            MSWQ YVD+HLMCDI+G   HLTSAAI+G DG+VWAQS+ FPQFKPEE+  I+K+F+E G+LAPTG+ + G KYMV+QGEPGAVIR              QA+I GIYDEP+ PGQCNM+VERLGDYL++QG+
Sbjct:    1 MSWQAYVDEHLMCDIEGTGQHLTSAAILGLDGTVWAQSAKFPQFKPEEMKGIIKEFDEAGTLAPTGMFIAGAKYMVLQGEPGAVIRGKKGAGGICIKKTGQAMIMGIYDEPVAPGQCNMVVERLGDYLLEQGM 133          
BLAST of CB610537 vs. ExPASy Swiss-Prot
Match: PROF2_ARTVU (Profilin-2 OS=Artemisia vulgaris PE=1 SV=3)

HSP 1 Score: 182.57 bits (462), Expect = 1.477e-45
Identity = 86/133 (64.66%), Postives = 102/133 (76.69%), Query Frame = 2
Query:   92 MSWQTYVDDHLMCDIDG--HHLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXXQALIFGIYDEPLTPGQCNMIVERLGDYLIDQGL 484
            MSWQTYVDDHLMCDI+G   HLT+AAI+G DG+VWA+S  FP+FKPEE+  I+ +F E G+LAPTGL LGG KYMV+QGE GAVIR              QA++ GIYDEP+ PGQCNMIVERLGDYL+DQ +
Sbjct:    1 MSWQTYVDDHLMCDIEGTGQHLTAAAILGLDGTVWAKSDKFPEFKPEEMKGIINEFNEVGTLAPTGLFLGGAKYMVLQGEAGAVIRGKKGAGGICIKKTGQAMVMGIYDEPVAPGQCNMIVERLGDYLVDQNM 133          
BLAST of CB610537 vs. ExPASy Swiss-Prot
Match: PROF_BRABE (Profilin OS=Branchiostoma belcheri PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.179e-18
Identity = 49/131 (37.40%), Postives = 74/131 (56.49%), Query Frame = 2
Query:   92 MSWQTYVDDHLMCDIDGHHLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXXQALIFGIYDEPLTPGQCNMIVERLGDYLIDQGL 484
            MSWQ YVD HL+       +T AAI G DGS+WA+S+   +   +E+A + + F +   LA  G+ +GGTKY+ + G+   +IR               A++  +Y EP+ P QC ++VE+LGD+LI   L
Sbjct:    1 MSWQQYVDQHLVAT---QCVTMAAICGLDGSIWAKSNGL-ELSQDEVATLARSFSKDEVLAANGIRIGGTKYIYLSGDD-KLIRGKKDRQGVHIVKTKTAMVMALYAEPILPEQCAVVVEKLGDWLIQNDL 126          
BLAST of CB610537 vs. ExPASy Swiss-Prot
Match: PROF_DROME (Profilin OS=Drosophila melanogaster GN=chic PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 4.479e-18
Identity = 50/130 (38.46%), Postives = 72/130 (55.38%), Query Frame = 2
Query:   92 MSWQTYVDDHLMCDIDGHHLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXXQALIFGIYDEPLTPGQCNMIVERLGDYLIDQG 481
            MSWQ YVD+ L+       +T A I GHDG++WAQSS F   K EE++ ++  F++   L   G+ L G +Y+ + G    V+R              QA+I  IY++P+ P Q   +VE+LGDYLI  G
Sbjct:    1 MSWQDYVDNQLLAS---QCVTKACIAGHDGNIWAQSSGFEVTK-EELSKLISGFDQQDGLTSNGVTLAGQRYIYLSGTD-RVVRAKLGRSGVHCMKTTQAVIVSIYEDPVQPQQAASVVEKLGDYLITCG 125          
BLAST of CB610537 vs. ExPASy Swiss-Prot
Match: PROF_BOMMO (Profilin OS=Bombyx mori PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 4.479e-18
Identity = 50/130 (38.46%), Postives = 71/130 (54.62%), Query Frame = 2
Query:   92 MSWQTYVDDHLMCDIDGHHLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXXQALIFGIYDEPLTPGQCNMIVERLGDYLIDQG 481
            MSWQ YVD  LM       +T AAI GHDG+VWA+S  F +   +E+A I+  FE    L   G+ + GT+Y+ + G    +IR              QA++  +Y+EP+ P Q   +VE+LG+YLI  G
Sbjct:    1 MSWQDYVDKQLMAS---RCVTKAAIAGHDGNVWAKSEGF-EISKDEVAKIVAGFENESLLTSGGVTIAGTRYIYLSGTDH-IIRAKLGKVGVHCMKTQQAVVISLYEEPIQPQQAASVVEKLGEYLITCG 125          
BLAST of CB610537 vs. ExPASy Swiss-Prot
Match: PROF1_DICDI (Profilin-1 OS=Dictyostelium discoideum GN=proA PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 6.468e-17
Identity = 56/133 (42.11%), Postives = 74/133 (55.64%), Query Frame = 2
Query:   92 MSWQTYVDDHLMCDIDGHHLTSAAIVG-HDGSVWAQSSNFPQFKPEE--IAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXXQALIFGIYDEPLTPGQCNMIVERLGDYLIDQG 481
            MSWQ YVD+ L     G  L+  AI+G +DG VWA+SS     KPE   IAA+   F+ P  +   G  +GG KYM I+G+P ++                QA+I GIYD+ + PG   +IVE+LGDYL D G
Sbjct:    1 MSWQQYVDEQLT----GAGLSQGAILGANDGGVWAKSSGINITKPEGDGIAAL---FKNPAEVFAKGALIGGVKYMGIKGDPQSIY-GKKGATGCVLVRTGQAIIVGIYDDKVQPGSAALIVEKLGDYLRDNG 125          
BLAST of CB610537 vs. ExPASy Swiss-Prot
Match: PROF_APIME (Profilin OS=Apis mellifera PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.210e-16
Identity = 48/130 (36.92%), Postives = 71/130 (54.62%), Query Frame = 2
Query:   92 MSWQTYVDDHLMCDIDGHHLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXXQALIFGIYDEPLTPGQCNMIVERLGDYLIDQG 481
            MS Q YVD  L+       +T AAI GHDG++WA+S  F   K EE+  +++ FEE   L  +G+ L G +Y+ + G    VIR              QA++  +Y++P+ P Q   +VE+LGDYL+  G
Sbjct:    1 MSCQDYVDKQLLAS---RCVTKAAIAGHDGNLWAKSEGFEVSK-EELTKLVQGFEEQDILTSSGVTLAGNRYIYLSGTD-RVIRAKLGKVGVHCMKTTQAVVVSLYEDPIQPQQAASVVEKLGDYLVSCG 125          
BLAST of CB610537 vs. ExPASy Swiss-Prot
Match: PROF2_ACACA (Profilin-2 OS=Acanthamoeba castellanii PE=1 SV=3)

HSP 1 Score: 85.1149 bits (209), Expect = 3.210e-16
Identity = 47/130 (36.15%), Postives = 71/130 (54.62%), Query Frame = 2
Query:   92 MSWQTYVDDHLMCDIDGHHLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXXQALIFGIYDEPLTPGQCNMIVERLGDYLIDQG 481
            MSWQTYVD +L   +    +T AAI+GHDG+ WA S+ F    P   AA+   F++  ++   G  L GT+Y+ I+ +  +V                +A++ G+Y+E + PG    +VE+L DYLI QG
Sbjct:    1 MSWQTYVDTNL---VGTGAVTQAAIIGHDGNTWATSAGFA-VSPANGAALANAFKDATAIRSNGFELAGTRYVTIRADDRSVY-GKKGSAGVITVKTSKAILIGVYNEKIQPGTAANVVEKLADYLIGQG 125          
BLAST of CB610537 vs. ExPASy Swiss-Prot
Match: PROF1_PHYPO (Profilin-A OS=Physarum polycephalum GN=PROA PE=3 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 4.635e-15
Identity = 47/130 (36.15%), Postives = 70/130 (53.85%), Query Frame = 2
Query:   92 MSWQTYVDDHLMCDIDGHHLTSAAIVGHDGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXXQALIFGIYDEPLTPGQCNMIVERLGDYLIDQG 481
            MSWQ YVDD L   +   H+  AAI+GHDG+VWA S N    K  E A I+  F++  S+   G+ + G KY+ I+ +  ++                Q+++ G Y+E + PGQ   +VE+L DYL + G
Sbjct:    1 MSWQAYVDDQL---VGTGHVIGAAIIGHDGNVWA-SKNL-SLKAGEGAKIVNGFKDSASVLSGGIFVDGQKYLTIKADDKSIY-GKKGAGGVVLVKTGQSVLIGHYNETIQPGQATTVVEKLADYLRENG 124          
BLAST of CB610537 vs. ExPASy Swiss-Prot
Match: PROF2_DICDI (Profilin-2 OS=Dictyostelium discoideum GN=proB PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.322e-13
Identity = 46/129 (35.66%), Postives = 68/129 (52.71%), Query Frame = 2
Query:   92 MSWQTYVDDHLMCDIDGHHLTSAAIVGH-DGSVWAQSSNFPQFKPEEIAAIMKDFEEPGSLAPTGLHLGGTKYMVIQGEPGAVIRXXXXXXXXXXXXXXQALIFGIYDEPLTPGQCNMIVERLGDYLID 475
            M+WQ YVD++L+    G    SAA++G  DGSVWA S+ F   + + I A+   F++ G+   TG+H+ G KYM I+ +  +                   +I  +YD+ L PG    I E+L DYLID
Sbjct:    1 MTWQAYVDNNLL----GAGFASAALLGAADGSVWAHSAGFNVAEGKAITAL---FQKDGAAFATGIHVAGKKYMAIKSDTRSAY-GKLGAGGVVCVKTLTCIIVAVYDDKLQPGAAANIAEKLADYLID 121          
The following BLAST results are available for this feature:
BLAST of CB610537 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 84
Match NameE-valueIdentityDescription
PROF_HELAN1.336e-4664.66Profilin OS=Helianthus annuus PE=1 SV=1[more]
PROF2_ARTVU1.477e-4564.66Profilin-2 OS=Artemisia vulgaris PE=1 SV=3[more]
PROF_BRABE1.179e-1837.40Profilin OS=Branchiostoma belcheri PE=2 SV=1[more]
PROF_DROME4.479e-1838.46Profilin OS=Drosophila melanogaster GN=chic PE=1 S... [more]
PROF_BOMMO4.479e-1838.46Profilin OS=Bombyx mori PE=2 SV=1[more]
PROF1_DICDI6.468e-1742.11Profilin-1 OS=Dictyostelium discoideum GN=proA PE=... [more]
PROF_APIME3.210e-1636.92Profilin OS=Apis mellifera PE=2 SV=1[more]
PROF2_ACACA3.210e-1636.15Profilin-2 OS=Acanthamoeba castellanii PE=1 SV=3[more]
PROF1_PHYPO4.635e-1536.15Profilin-A OS=Physarum polycephalum GN=PROA PE=3 S... [more]
PROF2_DICDI3.322e-1335.66Profilin-2 OS=Dictyostelium discoideum GN=proB PE=... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0003_IVaF_F07 Mature Albedo Citrus sinensis cDNA clone ALBEDO0003_IVaF_F07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610537 ID=CB610537; Name=CB610537; organism=Citrus sinensis; type=EST; length=632bp
GGGGGGAGCAAACAACGATAACGAGGGGAAGGAATTAACATAGGAATTAA
ACAAACAATTGAATTTGCCGTGAGACTTTAGATTGTTGAAAATGTCGTGG
CAAACATACGTTGATGATCATCTGATGTGCGATATCGACGGCCATCATCT
CACCTCAGCTGCGATCGTCGGTCACGACGGCAGCGTTTGGGCCCAGAGCT
CCAATTTCCCTCAGTTCAAGCCTGAAGAGATTGCTGCAATCATGAAAGAT
TTTGAAGAGCCCGGTTCTCTTGCCCCAACTGGTTTGCACCTTGGAGGCAC
CAAGTACATGGTAATCCAGGGTGAGCCTGGAGCTGTGATTCGTGGAAAAA
AGGGTTCTGGTGGTGTCACCGTCAAGAAAACGAGCCAAGCCCTGATTTTT
GGTATATACGATGAACCATTGACTCCAGGACAGTGCAACATGATCGTTGA
GAGGTTGGGGGATTATCTCATTGATCAGGGCCTGTAGATCCCATGTCAAC
TTCAAATGGTTTCGATATATTGCTTTCTGGTTTTCGGGCTTTGCCTCTTC
TTCCATATTTGGTCTTGAACTGGCAGTATAAATTTGTTTGCTGCAAAAAT
AACTGTGTGAGGACGAGAGTGATTTTTTTTTC
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