CB610556
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB610556 vs. ExPASy Swiss-Prot
Match: HS16A_ORYSJ (16.9 kDa class I heat shock protein 1 OS=Oryza sativa subsp. japonica GN=HSP16.9A PE=1 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 3.655e-38 Identity = 75/119 (63.03%), Postives = 92/119 (77.31%), Query Frame = 3 Query: 105 RRTNVFDPVSLDVWDPFDGFLSSALTNAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWDRVERSSGKFLRRFRLPDNAKVKQVK 461 RR+NVFDP SLD+WDPFD S + +S +T+ FANARIDWKETP++HVFKADLPG++ G +L ISG+RSKE+E+KNDKW RVERSSG+F+RRFRLP+NAKV QVK Sbjct: 5 RRSNVFDPFSLDLWDPFDSVFRSVVP--ATSDNDTAAFANARIDWKETPESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVDQVK 121
BLAST of CB610556 vs. ExPASy Swiss-Prot
Match: HS16C_ORYSJ (16.9 kDa class I heat shock protein 3 OS=Oryza sativa subsp. japonica GN=HSP16.9C PE=2 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 9.002e-37 Identity = 74/119 (62.18%), Postives = 92/119 (77.31%), Query Frame = 3 Query: 105 RRTNVFDPVSLDVWDPFDGFLSSALTNAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWDRVERSSGKFLRRFRLPDNAKVKQVK 461 RR+NVFDP + D WDPFDG S + +S R+T+ FANAR+DWKETP++HVFKADLPG++ G +L ISG+RSKE+E+KNDKW RVERSSG+F+RRFRLP+NAKV QVK Sbjct: 5 RRSNVFDPFA-DFWDPFDGVFRSLVP--ATSDRDTAAFANARVDWKETPESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVDQVK 120
BLAST of CB610556 vs. ExPASy Swiss-Prot
Match: HS177_ORYSJ (17.7 kDa class I heat shock protein OS=Oryza sativa subsp. japonica GN=HSP17.7 PE=2 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 1.176e-36 Identity = 76/126 (60.32%), Postives = 90/126 (71.43%), Query Frame = 3 Query: 105 RRTNVFDPVSLDVWDPFDGF-------LSSALTNAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWDRVERSSGKFLRRFRLPDNAKVKQVK 461 RR N FDP SLD+WDP DGF SS+ + P + + + FA ARIDWKETP+ HVFKAD+PGL+ G ILQISGERS+EQEEK+DKW RVERSSGKFLRRFRLP+N K +Q+K Sbjct: 5 RRGNAFDPFSLDLWDPVDGFPFGSGGSSSSSGSLFPRANSDAAAFAGARIDWKETPEVHVFKADVPGLKKEEVKVEVDDGNILQISGERSREQEEKSDKWHRVERSSGKFLRRFRLPENTKPEQIK 130
BLAST of CB610556 vs. ExPASy Swiss-Prot
Match: HS17B_ARATH (17.6 kDa class I heat shock protein 2 OS=Arabidopsis thaliana GN=HSP17.6B PE=2 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 1.536e-36 Identity = 76/130 (58.46%), Postives = 92/130 (70.77%), Query Frame = 3 Query: 75 MSLIPSIFGG-RRTNVFDPVSLDVWDPFDGFLSSALTNAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWDRVERSSGKFLRRFRLPDNAKVKQVK 461 MS+IPS F RR+N+FDP SLDVWDPF SS+L+ RE S NAR+DW+ETP+AHVFKADLPGL+ +L+ISGER E+E+KND W RVERSSG+F RRFRLP+N K+ QVK Sbjct: 1 MSMIPSFFNNNRRSNIFDPFSLDVWDPFKELTSSSLS------RENSAIVNARVDWRETPEAHVFKADLPGLKKEEVKVEIEEDSVLKISGERHVEKEDKNDTWHRVERSSGQFTRRFRLPENVKMDQVK 124
BLAST of CB610556 vs. ExPASy Swiss-Prot
Match: HSP11_SOLLC (17.8 kDa class I heat shock protein OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 2.619e-36 Identity = 79/132 (59.85%), Postives = 98/132 (74.24%), Query Frame = 3 Query: 75 MSLIPSIFGGRRTN-VFDPVSLDVWDPFD--GFLSSALTNAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWDRVERSSGKFLRRFRLPDNAKVKQVK 461 MSLIP IFG RR++ +FDP S+DV+DPF GF S+ ++ E+S FAN RIDWKETP+ HVFK DLPGL+ R+LQISGER+ E+E+KNDKW R+ERSSGKF+RRFRLP+NAK+ QVK Sbjct: 1 MSLIPRIFGDRRSSSMFDPFSIDVFDPFRELGFPST-------NSGESSAFANTRIDWKETPEPHVFKVDLPGLKKEEVKVEVEEDRVLQISGERNVEKEDKNDKWHRMERSSGKFMRRFRLPENAKMDQVK 125
BLAST of CB610556 vs. ExPASy Swiss-Prot
Match: HSP11_MEDSA (18.1 kDa class I heat shock protein (Fragment) OS=Medicago sativa GN=HSP18.1 PE=2 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 2.452e-34 Identity = 70/114 (61.40%), Postives = 86/114 (75.44%), Query Frame = 3 Query: 123 DPVSLDVWDPFDGF-LSSALTNAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWDRVERSSGKFLRRFRLPDNAKVKQVK 461 DP SLDVWDPF F +++ +A S +E S F + RIDWKETP+AHVFKADLPGL+ R+LQISGER+ E+E+KND+W RVERSSGKF+RRFRLP+NAK+ QVK Sbjct: 1 DPFSLDVWDPFKDFPFTNSALSASSFPQENSAFVSTRIDWKETPEAHVFKADLPGLKKEEVKVEIEDDRVLQISGERNVEKEDKNDQWHRVERSSGKFMRRFRLPENAKMDQVK 114
BLAST of CB610556 vs. ExPASy Swiss-Prot
Match: HS16A_WHEAT (16.9 kDa class I heat shock protein 1 OS=Triticum aestivum GN=hsp16.9A PE=2 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 4.182e-34 Identity = 72/120 (60.00%), Postives = 92/120 (76.67%), Query Frame = 3 Query: 105 RRTNVFDPVSLDVW-DPFDGFLSSALTNAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWDRVERSSGKFLRRFRLPDNAKVKQVK 461 RR+NVFDP + D+W DPFD F S + S+ ET+ FANAR+DWKETP+AHVFK DLPG++ G +L +SGERS+E+E+KNDKW RVERSSGKF+RRFRLP++AKV++VK Sbjct: 5 RRSNVFDPFA-DLWADPFDTFRSIVPAISGGSS-ETAAFANARVDWKETPEAHVFKVDLPGVKKEEVKVEVEDGNVLVVSGERSREKEDKNDKWHRVERSSGKFVRRFRLPEDAKVEEVK 122
BLAST of CB610556 vs. ExPASy Swiss-Prot
Match: HS16B_WHEAT (16.9 kDa class I heat shock protein 2 OS=Triticum aestivum GN=hsp16.9B PE=1 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 1.589e-33 Identity = 72/120 (60.00%), Postives = 90/120 (75.00%), Query Frame = 3 Query: 105 RRTNVFDPVSLDVW-DPFDGFLSSALTNAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWDRVERSSGKFLRRFRLPDNAKVKQVK 461 RRTNVFDP + D+W DPFD F S + ET+ FANAR+DWKETP+AHVFKADLPG++ G +L +SGER+KE+E+KNDKW RVERSSGKF+RRFRL ++AKV++VK Sbjct: 5 RRTNVFDPFA-DLWADPFDTF-RSIVPAISGGGSETAAFANARMDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLVVSGERTKEKEDKNDKWHRVERSSGKFVRRFRLLEDAKVEEVK 122
BLAST of CB610556 vs. ExPASy Swiss-Prot
Match: HS178_ARATH (17.8 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP17.8 PE=2 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 7.886e-33 Identity = 72/131 (54.96%), Postives = 87/131 (66.41%), Query Frame = 3 Query: 75 MSLIPSIFGGRR--TNVFDPVSLDVWDPFDGFLSSALTNAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWDRVERSSGKFLRRFRLPDNAKVKQVK 461 MSLIPS FG R ++FDP SLDVWDPF L S + ETS NAR+DWKET +AHVFKADLPG++ +L+ISGER E+EEK D W RVERSSG+F R+F+LP+N K+ QVK Sbjct: 1 MSLIPSFFGNNRRSNSIFDPFSLDVWDPF-----KELQFPSSLSGETSAITNARVDWKETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGQFSRKFKLPENVKMDQVK 126
BLAST of CB610556 vs. ExPASy Swiss-Prot
Match: HS17A_ARATH (17.6 kDa class I heat shock protein 1 OS=Arabidopsis thaliana GN=HSP17.6A PE=1 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 1.345e-32 Identity = 74/132 (56.06%), Postives = 87/132 (65.91%), Query Frame = 3 Query: 75 MSLIPSIFGGRR---TNVFDPVSLDVWDPFDGFLSSALTNAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWDRVERSSGKFLRRFRLPDNAKVKQVK 461 MSLIPS FG R N+FDP SLDVWDPF PSS+ +S ANAR+DWKET +AHVFKADLPG++ +L+ISGER E+EEK D W RVERSSG F R+FRLP+N K+ QVK Sbjct: 1 MSLIPSFFGNNRRINNNIFDPFSLDVWDPFKEL------QFPSSS--SSAIANARVDWKETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGGFSRKFRLPENVKMDQVK 124 The following BLAST results are available for this feature:
BLAST of CB610556 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 41
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Sequences
The
following sequences are available for this feature:
EST sequence >CB610556 ID=CB610556; Name=CB610556; organism=Citrus sinensis; type=EST; length=485bpback to top |