CB610556
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB610556 vs. ExPASy Swiss-Prot
Match: HS166_ORYSJ (16.6 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP16.6 PE=2 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 1.648e-22 Identity = 57/121 (47.11%), Postives = 72/121 (59.50%), Query Frame = 3 Query: 105 RRTNVFDPVSLDVWDPFDGFLSSALTNAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQE---EKNDKWDRVERSSGKFLRRFRLPDNAKVKQV 458 R NV DP+S+D W D F + S A N R+DWKETP AHVF ADLPG+R G +L ISGER++E++ + +++W VERSSGKF RRFRLP A+V QV Sbjct: 5 RSGNVLDPMSVDFWADADPFGA-----VRSLAERCPVLTNVRVDWKETPTAHVFTADLPGVRKDQAKVEVEDGGVLVISGERAREEDVDGKNDERWHHVERSSGKFQRRFRLPRGARVDQV 120
BLAST of CB610556 vs. ExPASy Swiss-Prot
Match: HS189_ORYSJ (18.9 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP18.9 PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 3.437e-20 Identity = 52/122 (42.62%), Postives = 73/122 (59.84%), Query Frame = 3 Query: 99 GGRRTNVFDPVSLDVWDPF-DGFLSSALTNAPSSARETSQF-ANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWDRVERSSGKFLRRFRLPDNAKVKQV 458 GG +PVS+D+ +PF D +A APS+A + + A +DWKET AHVF AD+PG+R ++L+ISG+R++ EEK ++W RVERSS +F+R RLP NA V Sbjct: 26 GGGGGGEIEPVSVDIMEPFMDAISLTAFAAAPSAAAAAAGVPSTASMDWKETAAAHVFMADMPGVRREEVRVEVEEEKVLRISGQRARAAEEKGERWHRVERSSERFVRTVRLPPNANTDGV 147
BLAST of CB610556 vs. ExPASy Swiss-Prot
Match: HSP41_SOYBN (22.0 kDa class IV heat shock protein OS=Glycine max GN=HSP22.0 PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 3.800e-19 Identity = 42/81 (51.85%), Postives = 54/81 (66.67%), Query Frame = 3 Query: 225 ARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWDRVERSSGKFLRRFRLPDNAKVKQVKGQ 467 AR+DWKETP+ HV D+PGL+ R+L++SGER KE+E+K D W RVERS GKF R+FRLP N + VK + Sbjct: 67 ARVDWKETPEGHVIMLDVPGLKREEIKVEVEENRVLRVSGERKKEEEKKGDHWHRVERSYGKFWRQFRLPQNVDLDSVKAK 147
BLAST of CB610556 vs. ExPASy Swiss-Prot
Match: HSP41_PEA (22.7 kDa class IV heat shock protein OS=Pisum sativum GN=HSP22.7 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 8.465e-19 Identity = 40/83 (48.19%), Postives = 56/83 (67.47%), Query Frame = 3 Query: 219 ANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWDRVERSSGKFLRRFRLPDNAKVKQVKGQ 467 ++AR+DWKETP+ HV D+PGL+ R+L++SGER KE+++K D W RVERS GKF R+F+LP N + VK + Sbjct: 73 SHARVDWKETPEGHVIMVDVPGLKKDDIKIEVEENRVLRVSGERKKEEDKKGDHWHRVERSYGKFWRQFKLPQNVDLDSVKAK 155
BLAST of CB610556 vs. ExPASy Swiss-Prot
Match: HSP22_ARATH (22.0 kDa heat shock protein OS=Arabidopsis thaliana GN=HSP22.0 PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 1.596e-17 Identity = 41/90 (45.56%), Postives = 59/90 (65.56%), Query Frame = 3 Query: 201 RETS-QFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWDRVERSSGKFLRRFRLPDNAKVKQVKGQ 467 R+TS + AR+DWKET + H D+PGL+ +L++SGER +E+E+K D+W RVERS GKF R+F+LPDN ++ VK + Sbjct: 62 RDTSVALSPARVDWKETAEGHEIMLDIPGLKKDEVKIEVEENGVLRVSGERKREEEKKGDQWHRVERSYGKFWRQFKLPDNVDMESVKAK 151
BLAST of CB610556 vs. ExPASy Swiss-Prot
Match: HS17B_ORYSJ (17.9 kDa heat shock protein 2 OS=Oryza sativa subsp. japonica GN=HSP17.9B PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 3.932e-16 Identity = 47/116 (40.52%), Postives = 69/116 (59.48%), Query Frame = 3 Query: 117 VFDPVSLDVWDPFDGFLSSALTNAPSSARETSQFANARIDWKETPQAHVFKADLP-GLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWDRVERSSGKFLRRFRLPDNAKVKQVK 461 +FD ++ D W+PF F ++ +A A +TS FAN I+ +ET +A+VF+ADLP G++ G +L I+GERS +EEK + +ERS F RF LPD+A V V+ Sbjct: 6 LFDTLAFDAWNPFSIFGTTVAADA-WLASDTSAFANTYIESRETAEAYVFRADLPAGVKKEEVRVEVDEGNVLVITGERSVRREEKGQRSHHIERSCATFFGRFHLPDDAVVDLVR 120
BLAST of CB610556 vs. ExPASy Swiss-Prot
Match: HSP12_SOYBN (Class I heat shock protein (Fragment) OS=Glycine max GN=HSP6834-A PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.071e-13 Identity = 36/45 (80.00%), Postives = 40/45 (88.89%), Query Frame = 3 Query: 327 ILQISGERSKEQEEKNDKWDRVERSSGKFLRRFRLPDNAKVKQVK 461 ILQISGER+ E+E+KND W RVERSSGKF+R FRLPDNAKV QVK Sbjct: 1 ILQISGERNVEKEDKNDTWHRVERSSGKFMRSFRLPDNAKVDQVK 45
BLAST of CB610556 vs. ExPASy Swiss-Prot
Match: HS219_ORYSJ (21.9 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP21.9 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.399e-13 Identity = 42/99 (42.42%), Postives = 61/99 (61.62%), Query Frame = 3 Query: 186 APSSARETSQFANARIDWKETPQAHVFKADLPGL-RXXXXXXXXXXGRILQISGER-----SKEQEEKND--KWDRVERSSGKFLRRFRLPDNAKVKQV 458 A ++A E + A AR DWKETP+AHV D+PG+ R R+L++SGER ++E+E + D +W R ER++G+F RRFR+P A V +V Sbjct: 59 AAAAAGEPAAVALARCDWKETPEAHVVTVDVPGVRRGDVRVEVDEASRVLRVSGERRRAGAAEEEEGERDGVRWHRAERAAGRFWRRFRMPPGADVGRV 157
BLAST of CB610556 vs. ExPASy Swiss-Prot
Match: HS232_ORYSJ (23.2 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP23.2 PE=2 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 5.314e-13 Identity = 53/143 (37.06%), Postives = 73/143 (51.05%), Query Frame = 3 Query: 54 LASQFAIMSLIPSIFGG--RRTNVFDPVSLDVWDPFDGFLSSALTNAPSS--ARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQ--EEK--NDKWDRVERSSGKFLRRFRLPDNAKVKQV 458 LAS A +L+P GG R V + L DPF L + P + + + AR+DW+ET AH D+PG+R R+L+ISGER +E+ E+K D W R ERS G+F R+ RLPDNA + + Sbjct: 20 LASTAADGALLPWFGGGGARDEAVPELGLLAAADPF-----RILEHVPFGFDRDDVAMLSMARVDWRETGDAHEVVVDVPGMRKEDLRVEVEDNRVLRISGERRREETTEQKGGGDHWHREERSYGRFWRQLRLPDNADLDSI 157
BLAST of CB610556 vs. ExPASy Swiss-Prot
Match: HSP21_SOLPE (17.3 kDa class II heat shock protein OS=Solanum peruvianum PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 3.445e-12 Identity = 37/94 (39.36%), Postives = 53/94 (56.38%), Query Frame = 3 Query: 183 NAPSS--ARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWDRVERSSGKFLRRFRLPDNAKVKQV 458 NAPS R+ A D KE P ++VF D+PGL+ +L ISGER +E+E++ K+ R+ER GKF+R+F LP+NA + Sbjct: 30 NAPSKIYVRDAKAMAATPADVKEYPNSYVFVVDMPGLKSGDIKVQVEEDNVLLISGERKREEEKEGAKFIRMERRVGKFMRKFSLPENANTDAI 123 The following BLAST results are available for this feature:
BLAST of CB610556 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 41
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Sequences
The
following sequences are available for this feature:
EST sequence >CB610556 ID=CB610556; Name=CB610556; organism=Citrus sinensis; type=EST; length=485bpback to top |