CB610556

Overview
NameCB610556
Unique NameCB610556
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length485
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CB610556 vs. ExPASy Swiss-Prot
Match: HSP22_MAIZE (17.8 kDa class II heat shock protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.309e-11
Identity = 44/113 (38.94%), Postives = 58/113 (51.33%), Query Frame = 3 
Query:  135 LDVWDPFDGFLSSALTNAPSSA-----RETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWDRVERSSGKFLRRFRLPDNAKVKQV 458
            LDV D   G      T +  SA     R+    A    D KE P A+ F  D+PGL            R+L +SGER +E+ E + K+ R+ER  GKF+R+F LPDNA V +V
Sbjct:   20 LDVPDGDAGAGGDNKTGSGGSATRTYVRDARAMAATPADVKELPGAYAFVVDMPGLGTGDIRVQVEDERVLVVSGERRREEREDDAKYLRMERRMGKFMRKFVLPDNADVDKV 132
The following BLAST results are available for this feature:
BLAST of CB610556 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
HSP22_MAIZE1.309e-1138.9417.8 kDa class II heat shock protein OS=Zea mays P... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0003_IVaF_E06 Mature Albedo Citrus sinensis cDNA clone ALBEDO0003_IVaF_E06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610556 ID=CB610556; Name=CB610556; organism=Citrus sinensis; type=EST; length=485bp
GGGGATCTNNAAATTGCTTGATCAAAGCATTTCCGAAGTTGTTGAGCAGA
TAATTAGCGTCCCAGTTTGCCATAATGTCACTCATTCCAAGCATCTTCGG
TGGCCGAAGAACCAACGTGTTCGATCCAGTTTCATTAGATGTATGGGATC
CTTTCGACGGGTTCTTGTCCTCTGCCCTTACCAACGCGCCGTCTTCGGCT
AGGGAAACATCCCAATTCGCCAATGCAAGAATTGACTGGAAAGAGACTCC
TCAGGCTCACGTATTCAAAGCTGATCTTCCAGGGCTGAGGAAAGAAGAAG
TAAAAGTTGAGGTTGAAGAGGGCAGGATTCTGCAGATAAGCGGAGAGAGG
AGCAAGGAGCAGGAAGAGAAGAATGACAAGTGGGATCGCGTCGAGAGGAG
CAGTGGCAAGTTCCTGAGGAGGTTCAGGTTGCCCGACAATGCTAAGGTGA
AACAGGTTAAGGGCCAGCATGGAAAATGGTGTGCT
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