CB610663
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB610663 vs. ExPASy Swiss-Prot
Match: TBB5_ARATH (Tubulin beta-5 chain OS=Arabidopsis thaliana GN=TUBB5 PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 4.213e-26 Identity = 52/159 (32.70%), Postives = 91/159 (57.23%), Query Frame = 3 Query: 6 FMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 482 F + +AP+ S + L+VPE+T +++ +MM DPRHG+Y+ ++RG + K+V+ + I+ K + FV+W P K + PP ++ A + N+T++ E+F R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ Sbjct: 266 FFMVGFAPLTSRGSQQYISLTVPELTQQMWDSKNMMCAADPRHGRYLTASAIFRGQMSTKEVDEQILNIQNKNSSYFVEWIPNNVKSSVCDIPP--------KGLKMAATFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 416
BLAST of CB610663 vs. ExPASy Swiss-Prot
Match: TBB4_ORYSJ (Tubulin beta-4 chain OS=Oryza sativa subsp. japonica GN=TUBB4 PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 4.213e-26 Identity = 53/159 (33.33%), Postives = 90/159 (56.60%), Query Frame = 3 Query: 6 FMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 482 F + +AP+ S + L+VPE+T +++ +MM DPRHG+Y+ M+RG + K+V+ + ++ K + FV+W P K + PP + A I N+T++ E+F R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ Sbjct: 265 FFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP--------RGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 415
BLAST of CB610663 vs. ExPASy Swiss-Prot
Match: TBB4_ELEIN (Tubulin beta-4 chain OS=Eleusine indica GN=TUBB4 PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 4.213e-26 Identity = 53/159 (33.33%), Postives = 90/159 (56.60%), Query Frame = 3 Query: 6 FMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 482 F + +AP+ S + L+VPE+T +++ +MM DPRHG+Y+ M+RG + K+V+ + ++ K + FV+W P K + PP + A I N+T++ E+F R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ Sbjct: 265 FFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP--------RGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 415
BLAST of CB610663 vs. ExPASy Swiss-Prot
Match: TBB2_ELEIN (Tubulin beta-2 chain OS=Eleusine indica GN=TUBB2 PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 4.213e-26 Identity = 53/159 (33.33%), Postives = 90/159 (56.60%), Query Frame = 3 Query: 6 FMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 482 F + +AP+ S + L+VPE+T +++ +MM DPRHG+Y+ M+RG + K+V+ + ++ K + FV+W P K + PP + A I N+T++ E+F R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ Sbjct: 265 FFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP--------RGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 415
BLAST of CB610663 vs. ExPASy Swiss-Prot
Match: TBB1_WHEAT (Tubulin beta-1 chain OS=Triticum aestivum GN=TUBB1 PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 4.213e-26 Identity = 53/159 (33.33%), Postives = 90/159 (56.60%), Query Frame = 3 Query: 6 FMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 482 F + +AP+ S + L+VPE+T +++ +MM DPRHG+Y+ M+RG + K+V+ + ++ K + FV+W P K + PP + A I N+T++ E+F R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ Sbjct: 265 FFMVGFAPLTSRGSQMYRPLTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP--------RGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 415
BLAST of CB610663 vs. ExPASy Swiss-Prot
Match: TBB1_ORYSJ (Tubulin beta-1 chain OS=Oryza sativa subsp. japonica GN=TUBB1 PE=2 SV=2) HSP 1 Score: 117.857 bits (294), Expect = 4.213e-26 Identity = 53/159 (33.33%), Postives = 90/159 (56.60%), Query Frame = 3 Query: 6 FMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 482 F + +AP+ S + L+VPE+T +++ +MM DPRHG+Y+ M+RG + K+V+ + ++ K + FV+W P K + PP + A I N+T++ E+F R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ Sbjct: 265 FFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP--------RGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 415
BLAST of CB610663 vs. ExPASy Swiss-Prot
Match: TBB_USTMA (Tubulin beta chain OS=Ustilago maydis GN=UM05828 PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 5.502e-26 Identity = 56/162 (34.57%), Postives = 90/162 (55.56%), Query Frame = 3 Query: 6 FMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAAL 491 F + ++P+ + + +++PEIT F+ +MM CD R G+Y+ C +RG V KDV + + + K + QFV+W P + PP ++ +V I N+TA+ +VF RI +F M+ ++AF+HWY GEGM+E EF+EA +L L Sbjct: 265 FFMVGFSPLTARGSQSYRAVTIPEITQQAFDSKNMMTACDTRLGRYLTCAAYFRGKVSMKDVEDQMQSFQQKHSTQFVEWIPNNVQTAQCDIPP--------RGLKMSVTFIGNSTAIQDVFKRIAEQFSAMFKRKAFLHWYTGEGMDEMEFTEAESNLQDL 418
BLAST of CB610663 vs. ExPASy Swiss-Prot
Match: TBB_PENDI (Tubulin beta chain OS=Penicillium digitatum GN=TUB2 PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 5.502e-26 Identity = 53/159 (33.33%), Postives = 93/159 (58.49%), Query Frame = 3 Query: 6 FMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 482 F + +AP+ S + + Q+SVPE+T +F+P +MMA D R+G+Y+ C ++RG + K+V + I+ K FV+W P + + PP ++ + + N+T++ E+F R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ Sbjct: 265 FFMVGFAPLTSRGGSSYRQVSVPELTQQMFDPKNMMAASDFRNGRYLTCSALFRGKISMKEVEDQMRNIQNKNQSYFVEWIPNNVQTALCSVPP--------RGLKMSSTFVGNSTSIQELFKRVGDQFAAMFRRKAFLHWYTGEGMDEMEFTEAESNM 415
BLAST of CB610663 vs. ExPASy Swiss-Prot
Match: TBB_ENCHE (Tubulin beta chain OS=Encephalitozoon hellem GN=TUB2 PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 5.502e-26 Identity = 54/159 (33.96%), Postives = 92/159 (57.86%), Query Frame = 3 Query: 6 FMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 482 F + AP+I+ + SV E+T +F+ +MM CDPR G+Y+ M+RG + KDV+ ++ +++K + FV+W P+ K + PT ++ + + N T++ E+F RI +F +M+ ++AF+HWY GEGM+E EFSEA ++ Sbjct: 265 FFVVGSAPLIAIGTQKFKTYSVSELTQQMFDSKNMMTACDPRKGRYLTVAAMFRGKISMKDVDEQMSMVQSKNSTLFVEWIPSNVKTAVCDIAPT--------GLEMSATFVGNTTSIQELFKRISDQFTVMFRRKAFLHWYTGEGMDEMEFSEAESNM 415
BLAST of CB610663 vs. ExPASy Swiss-Prot
Match: TBB6_ORYSJ (Tubulin beta-6 chain OS=Oryza sativa subsp. japonica GN=TUBB6 PE=2 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 5.502e-26 Identity = 52/159 (32.70%), Postives = 90/159 (56.60%), Query Frame = 3 Query: 6 FMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 482 F + +AP+ S + L+VPE+T +++ +MM DPRHG+Y+ M+RG + K+V+ + ++ K + FV+W P K + PP + A + N+T++ E+F R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ Sbjct: 265 FFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP--------RGLSMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 415 The following BLAST results are available for this feature:
BLAST of CB610663 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 381
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Sequences
The
following sequences are available for this feature:
EST sequence >CB610663 ID=CB610663; Name=CB610663; organism=Citrus sinensis; type=EST; length=612bpback to top |