CB610663
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB610663 vs. ExPASy Swiss-Prot
Match: TBA1C_BOVIN (Tubulin alpha-1C chain OS=Bos taurus GN=TUBA1C PE=1 SV=1) HSP 1 Score: 310.071 bits (793), Expect = 5.784e-84 Identity = 144/164 (87.80%), Postives = 156/164 (95.12%), Query Frame = 3 Query: 6 FMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 497 F L++YAPVISAEKAYHEQLSV EITNA FEP++ M KCDPRHGKYMACCL+YRGDVVPKDVNAA+ATIKTKRT+QFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN TAVAE ++R+DHKFDLMYAKRAFVHWYVGEGMEEGEFSEARED+AALEK Sbjct: 267 FPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAVAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEK 430
BLAST of CB610663 vs. ExPASy Swiss-Prot
Match: TBA3_RAT (Tubulin alpha-3 chain OS=Rattus norvegicus GN=Tuba3a PE=2 SV=1) HSP 1 Score: 309.686 bits (792), Expect = 7.554e-84 Identity = 143/164 (87.20%), Postives = 156/164 (95.12%), Query Frame = 3 Query: 6 FMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 497 F L++YAPVISAEKAYHEQLSV EITNA FEP++ M KCDPRHGKYMACC++YRGDVVPKDVNAA+ATIKTKRT+QFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN TA+AE ++R+DHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK Sbjct: 267 FPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 430
BLAST of CB610663 vs. ExPASy Swiss-Prot
Match: TBA3_MOUSE (Tubulin alpha-3 chain OS=Mus musculus GN=Tuba3a PE=1 SV=1) HSP 1 Score: 309.686 bits (792), Expect = 7.554e-84 Identity = 143/164 (87.20%), Postives = 156/164 (95.12%), Query Frame = 3 Query: 6 FMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 497 F L++YAPVISAEKAYHEQLSV EITNA FEP++ M KCDPRHGKYMACC++YRGDVVPKDVNAA+ATIKTKRT+QFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN TA+AE ++R+DHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK Sbjct: 267 FPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 430
BLAST of CB610663 vs. ExPASy Swiss-Prot
Match: TBA3_MAIZE (Tubulin alpha-3 chain OS=Zea mays GN=TUBA3 PE=2 SV=1) HSP 1 Score: 309.686 bits (792), Expect = 7.554e-84 Identity = 147/164 (89.63%), Postives = 156/164 (95.12%), Query Frame = 3 Query: 6 FMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 497 FMLSSYAPVIS+ KA+HEQLSV EIT++ FEP+SMM KCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRT+QFVDWCPTGFKCGINYQ PTVVPG DLAKVQRAVCMISN+T+V EVFSRI+ KFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK Sbjct: 267 FMLSSYAPVISSAKAFHEQLSVAEITSSAFEPASMMVKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQAPTVVPGADLAKVQRAVCMISNSTSVVEVFSRINSKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 430
BLAST of CB610663 vs. ExPASy Swiss-Prot
Match: TBA3C_HUMAN (Tubulin alpha-3C/D chain OS=Homo sapiens GN=TUBA3C PE=1 SV=3) HSP 1 Score: 309.686 bits (792), Expect = 7.554e-84 Identity = 143/164 (87.20%), Postives = 156/164 (95.12%), Query Frame = 3 Query: 6 FMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 497 F L++YAPVISAEKAYHEQLSV EITNA FEP++ M KCDPRHGKYMACC++YRGDVVPKDVNAA+ATIKTKRT+QFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN TA+AE ++R+DHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK Sbjct: 267 FPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 430
BLAST of CB610663 vs. ExPASy Swiss-Prot
Match: TBA1_CHICK (Tubulin alpha-1 chain (Fragment) OS=Gallus gallus PE=1 SV=1) HSP 1 Score: 309.686 bits (792), Expect = 7.554e-84 Identity = 143/164 (87.20%), Postives = 156/164 (95.12%), Query Frame = 3 Query: 6 FMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 497 F L++YAPVISAEKAYHEQLSV EITNA FEP++ M KCDPRHGKYMACCL+YRGDVVPKDVNAA+ATIKTKRT+QFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN TA+AE ++R+DHKFDLMYAKRAFVHWYVGEGMEEGEFSEARED+AALEK Sbjct: 228 FPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEK 391
BLAST of CB610663 vs. ExPASy Swiss-Prot
Match: TBA1D_BOVIN (Tubulin alpha-1D chain OS=Bos taurus GN=TUBA1D PE=1 SV=1) HSP 1 Score: 309.686 bits (792), Expect = 7.554e-84 Identity = 143/164 (87.20%), Postives = 156/164 (95.12%), Query Frame = 3 Query: 6 FMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 497 F L++YAPVISAEKAYHEQLSV EITNA FEP++ M KCDPRHGKYMACCL+YRGDVVPKDVNAA+ATIKTKRT+QFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN TA+AE ++R+DHKFDLMYAKRAFVHWYVGEGMEEGEFSEARED+AALEK Sbjct: 267 FPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEK 430
BLAST of CB610663 vs. ExPASy Swiss-Prot
Match: TBA1A_RAT (Tubulin alpha-1A chain OS=Rattus norvegicus GN=Tuba1a PE=1 SV=1) HSP 1 Score: 309.686 bits (792), Expect = 7.554e-84 Identity = 143/164 (87.20%), Postives = 156/164 (95.12%), Query Frame = 3 Query: 6 FMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 497 F L++YAPVISAEKAYHEQLSV EITNA FEP++ M KCDPRHGKYMACCL+YRGDVVPKDVNAA+ATIKTKRT+QFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN TA+AE ++R+DHKFDLMYAKRAFVHWYVGEGMEEGEFSEARED+AALEK Sbjct: 267 FPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEK 430
BLAST of CB610663 vs. ExPASy Swiss-Prot
Match: TBA1A_PANTR (Tubulin alpha-1A chain OS=Pan troglodytes GN=TUBA1A PE=2 SV=1) HSP 1 Score: 309.686 bits (792), Expect = 7.554e-84 Identity = 143/164 (87.20%), Postives = 156/164 (95.12%), Query Frame = 3 Query: 6 FMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 497 F L++YAPVISAEKAYHEQLSV EITNA FEP++ M KCDPRHGKYMACCL+YRGDVVPKDVNAA+ATIKTKRT+QFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN TA+AE ++R+DHKFDLMYAKRAFVHWYVGEGMEEGEFSEARED+AALEK Sbjct: 267 FPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEK 430
BLAST of CB610663 vs. ExPASy Swiss-Prot
Match: TBA1A_MOUSE (Tubulin alpha-1A chain OS=Mus musculus GN=Tuba1a PE=1 SV=1) HSP 1 Score: 309.686 bits (792), Expect = 7.554e-84 Identity = 143/164 (87.20%), Postives = 156/164 (95.12%), Query Frame = 3 Query: 6 FMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 497 F L++YAPVISAEKAYHEQLSV EITNA FEP++ M KCDPRHGKYMACCL+YRGDVVPKDVNAA+ATIKTKRT+QFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN TA+AE ++R+DHKFDLMYAKRAFVHWYVGEGMEEGEFSEARED+AALEK Sbjct: 267 FPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEK 430 The following BLAST results are available for this feature:
BLAST of CB610663 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 381
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Sequences
The
following sequences are available for this feature:
EST sequence >CB610663 ID=CB610663; Name=CB610663; organism=Citrus sinensis; type=EST; length=612bpback to top |