CB610672

Overview
NameCB610672
Unique NameCB610672
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length531
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB610672 vs. ExPASy Swiss-Prot
Match: FOLD2_GEOMG (Bifunctional protein folD 2 OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=folD2 PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 4.670e-38
Identity = 85/160 (53.12%), Postives = 110/160 (68.75%), Query Frame = 1
Query:   52 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKEGQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKLNGVTIKGK 531
            +TIIDGKA+A  +R+EIA EV++L EK G +PGLA V+VG     + YV MK  AC E+G+ S    LP   +EAEL++ V  LN+ P +HGILVQLPLPK IN + +L  IS  KDVDGFHP N+G+L M G+ P F PCTP G + +L+  GV + GK
Sbjct:    2 STIIDGKAIAAKLRAEIATEVKILKEK-GIIPGLATVLVGEDPASEVYVRMKGNACQELGMHSVKHTLPATTTEAELLALVARLNSDPTIHGILVQLPLPKQINSDTILEAISPVKDVDGFHPYNVGRL-MVGK-PTFQPCTPYGVMVMLREAGVDLAGK 158          
BLAST of CB610672 vs. ExPASy Swiss-Prot
Match: FOLD_PELPD (Bifunctional protein folD OS=Pelobacter propionicus (strain DSM 2379) GN=folD PE=3 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.040e-37
Identity = 88/160 (55.00%), Postives = 109/160 (68.12%), Query Frame = 1
Query:   52 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKEGQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKLNGVTIKGK 531
            A IIDGKA+A  IRSEIA  VR L  K G  PGLAVV+VG  +  + YVSMK KAC + GI S +  L  + SEAEL++ V  LN  P +HGILVQLPLP  I+ +KVL  IS  KDVDGFHP N+G+L++    P+F PCTP G + +L+  GV +KGK
Sbjct:    2 AHIIDGKAIAAKIRSEIASGVRELQGK-GVTPGLAVVLVGDDQASRVYVSMKEKACNDAGIFSVEHKLAAETSEAELLALVELLNNDPKIHGILVQLPLPSQIDTDKVLEAISPFKDVDGFHPYNVGRLSV--GKPVFQPCTPYGVMVMLREAGVELKGK 158          
BLAST of CB610672 vs. ExPASy Swiss-Prot
Match: FOLD_PASMU (Bifunctional protein folD OS=Pasteurella multocida GN=folD PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 2.318e-37
Identity = 76/160 (47.50%), Postives = 109/160 (68.12%), Query Frame = 1
Query:   52 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKEGQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKLNGVTIKGK 531
            A +I G  +++TI+S++A+++   +++  + PGLAV++VG     Q YV  KRK+CAE+GI+S   DLPE   E+EL++ + ELNA   V GILVQLPLPKHI+  KV+  I+ EKDVDGFHP N+G+L    R P    CTP G ++LL+  G+ + GK
Sbjct:    3 AQVISGTELSKTIKSQVAQKIETYTQQGKRSPGLAVILVGADPASQVYVGSKRKSCAEIGIQSKSYDLPETTQESELLALIDELNADTTVDGILVQLPLPKHIDSTKVIERITPEKDVDGFHPYNVGRLCQ--RIPTLRACTPYGVMKLLETTGIDLHGK 160          
BLAST of CB610672 vs. ExPASy Swiss-Prot
Match: FOLD_AQUAE (Bifunctional protein folD OS=Aquifex aeolicus GN=folD PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 2.318e-37
Identity = 82/160 (51.25%), Postives = 110/160 (68.75%), Query Frame = 1
Query:   52 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKEGQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKLNGVTIKGK 531
            A I+DGK++++ IR EI +EV   + K  + P LAV++VG     + YV+ KRKAC +VGIKS    LP+ VSE +L+  ++ELN   +V GILVQLPLPKHI++ +V+  IS EKDVDGFHP N+GKL  +  D  F+PCTP G   LLK  G+ +KGK
Sbjct:    2 ALILDGKSLSKKIREEIKKEVENFTSKGFRPPALAVILVGNDPASEIYVNNKRKACEKVGIKSLFYHLPQDVSEEKLLGLIYELNMNEEVDGILVQLPLPKHIDQTRVILSISPEKDVDGFHPENMGKLVAQIEDG-FIPCTPLGIDILLKHYGIDVKGK 160          
BLAST of CB610672 vs. ExPASy Swiss-Prot
Match: FOLD_SHEON (Bifunctional protein folD OS=Shewanella oneidensis GN=folD PE=3 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 3.953e-37
Identity = 81/159 (50.94%), Postives = 103/159 (64.78%), Query Frame = 1
Query:   52 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKEGQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKLNGVTIKG 528
            A IIDGKA+AQ+IR+++ E+V    E   +VPGLAV++VG     Q YV  KRKAC EVG  S   DL    SEAEL++ + +LN  P + GILVQLPLP HI + KV+  I  +KDVDGFHP N+G+LA   R P+   CTP G + L+K  GV   G
Sbjct:    3 AQIIDGKAIAQSIRTQLREQVTARKEAGQRVPGLAVILVGADPASQVYVGSKRKACEEVGFISRSYDLDTSCSEAELLALIDQLNDDPSIDGILVQLPLPAHIEDSKVIERIRPDKDVDGFHPYNVGRLAQ--RIPVLRSCTPMGIMTLIKSTGVDTYG 159          
BLAST of CB610672 vs. ExPASy Swiss-Prot
Match: FOLD_LYSSC (Bifunctional protein folD OS=Lysinibacillus sphaericus (strain C3-41) GN=folD PE=3 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 3.953e-37
Identity = 78/160 (48.75%), Postives = 115/160 (71.88%), Query Frame = 1
Query:   52 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKEGQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKLNGVTIKGK 531
            + II+GK + Q IR+ +AE V  L E+ G  PGLAVV+VG  +   +YV  K+K+C  +G+ S  I LPE+  + EL++++ +LN   D+HGILVQLPLPKHI+E+ V+  I++EKDVDGF P+++GK+ M G++  FLPCTP G ++LL+ +G+ I GK
Sbjct:    3 SAIINGKEIGQEIRNAVAERVIRLKEQ-GLTPGLAVVLVGDNQASATYVRNKQKSCEAIGMYSELIKLPEETKQEELLTQIQQLNQREDIHGILVQLPLPKHIDEDTVIATIAVEKDVDGFSPVSVGKM-MLGQE-TFLPCTPFGVMKLLEYSGIEIAGK 159          
BLAST of CB610672 vs. ExPASy Swiss-Prot
Match: FOLD_LACS1 (Bifunctional protein folD OS=Lactobacillus salivarius subsp. salivarius (strain UCC118) GN=folD PE=3 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 3.953e-37
Identity = 84/160 (52.50%), Postives = 106/160 (66.25%), Query Frame = 1
Query:   52 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKEGQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKLNGVTIKGK 531
            ATI+DG+ +++ IR+ ++E+V LL ++ G  P L V++VG     Q YV  KRK    +GI++ DI LPE V E ELI  + ELN+   VHGILVQLPLPKHINE KV   I  EKDVDGFHPLNIGKL M    P  LPCTP+G +E  K   + + GK
Sbjct:    3 ATILDGRMLSKKIRTNVSEKVSLLKQE-GITPKLVVILVGEDPASQVYVRNKRKTAHALGIEAVDIRLPENVEEDELIRLIDELNSDGTVHGILVQLPLPKHINENKVTHRIIPEKDVDGFHPLNIGKLFMNIPGP--LPCTPRGIMEFFKEYDIPVSGK 159          
BLAST of CB610672 vs. ExPASy Swiss-Prot
Match: FOLD_SHELP (Bifunctional protein folD OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=folD PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 5.163e-37
Identity = 79/159 (49.69%), Postives = 103/159 (64.78%), Query Frame = 1
Query:   52 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKEGQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKLNGVTIKG 528
            A IIDGKA+AQ+IR +++ +V    E   +VPGLAV++VG     Q YV  KR+AC EVG  S   DLP + SEA+L++ + + N  P + GILVQLPLP HI E KV+  I  +KDVDGFHP N+G+LA   R P+   CTP G + L+K  GV   G
Sbjct:    3 AQIIDGKAIAQSIRKQLSAKVTARKEAGKRVPGLAVILVGADPASQVYVGSKRRACEEVGFLSQSFDLPTETSEADLLALIDKCNEDPSIDGILVQLPLPDHIEESKVIERIRPDKDVDGFHPYNVGRLAQ--RIPVLRSCTPMGIMTLIKSTGVDTYG 159          
BLAST of CB610672 vs. ExPASy Swiss-Prot
Match: FOLD_LARHH (Bifunctional protein folD OS=Laribacter hongkongensis (strain HLHK9) GN=folD PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 5.163e-37
Identity = 76/160 (47.50%), Postives = 108/160 (67.50%), Query Frame = 1
Query:   52 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKEGQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKLNGVTIKGK 531
            A +IDGK ++  +   +A  V+  +E   + P LAV++VG     + YV  K+K C + GI+S   DLPE  SEA+L++ V ELNA  DV GILVQLPLP+HIN E V+  I+ +KDVDGFHP N+G+LA+K   PL  PCTP+G + +L+  G++++GK
Sbjct:    3 AQLIDGKTISAALLDRVAAGVKARTEAGKRAPALAVILVGNNPASEVYVRNKKKGCEKAGIQSLAYDLPESTSEADLLALVDELNARSDVDGILVQLPLPRHINPETVIERINPKKDVDGFHPYNMGRLAVK--MPLLRPCTPRGVMIMLEHAGISVEGK 160          
BLAST of CB610672 vs. ExPASy Swiss-Prot
Match: FOLD_CLOTH (Bifunctional protein folD OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=folD PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 6.743e-37
Identity = 81/161 (50.31%), Postives = 111/161 (68.94%), Query Frame = 1
Query:   49 KATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKEGQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKLNGVTIKGK 531
            +A +++GK ++  I+ E+  EV  L +K    PGLAV+IVG     + YV+ K+KACAE+GI+SF+  L E  ++ ELI  +H+LN    V GILVQLPLPKHI+EEKV+  I   KDVD FHP+N+GKL +   +P FLPCTP G +EL+K +G+ I GK
Sbjct:    2 EAKVLNGKELSTKIKEELKIEVEDL-KKNNINPGLAVIIVGNDPASRVYVNSKKKACAEIGIESFEYALEENTTQEELIELIHKLNKDDKVSGILVQLPLPKHIDEEKVIYAIDPSKDVDAFHPVNVGKLMI--GNPDFLPCTPAGVMELIKESGIDITGK 159          
The following BLAST results are available for this feature:
BLAST of CB610672 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FOLD2_GEOMG4.670e-3853.13Bifunctional protein folD 2 OS=Geobacter metallire... [more]
FOLD_PELPD1.040e-3755.00Bifunctional protein folD OS=Pelobacter propionicu... [more]
FOLD_PASMU2.318e-3747.50Bifunctional protein folD OS=Pasteurella multocida... [more]
FOLD_AQUAE2.318e-3751.25Bifunctional protein folD OS=Aquifex aeolicus GN=f... [more]
FOLD_SHEON3.953e-3750.94Bifunctional protein folD OS=Shewanella oneidensis... [more]
FOLD_LYSSC3.953e-3748.75Bifunctional protein folD OS=Lysinibacillus sphaer... [more]
FOLD_LACS13.953e-3752.50Bifunctional protein folD OS=Lactobacillus salivar... [more]
FOLD_SHELP5.163e-3749.69Bifunctional protein folD OS=Shewanella loihica (s... [more]
FOLD_LARHH5.163e-3747.50Bifunctional protein folD OS=Laribacter hongkongen... [more]
FOLD_CLOTH6.743e-3750.31Bifunctional protein folD OS=Clostridium thermocel... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0003_IIIaF_E04 Mature Albedo Citrus sinensis cDNA clone ALBEDO0003_IIIaF_E04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610672 ID=CB610672; Name=CB610672; organism=Citrus sinensis; type=EST; length=531bp
GGGGATCAAATCTCTAGTTCTAGAATAATGGCGGCACCGTCAGATCAGAA
GGCCACCATAATCGACGGCAAAGCCGTCGCTCAGACCATCCGATCTGAAA
TCGCAGAAGAAGTCCGCCTCCTTTCTGAAAAATATGGCAAGGTGCCTGGA
CTGGCAGTAGTAATAGTGGGTGGCAGAAAAGAGGGTCAAAGCTATGTGAG
CATGAAGAGAAAGGCTTGTGCTGAAGTTGGGATTAAGTCTTTTGACATAG
ACCTCCCCGAGCAAGTCTCCGAGGCCGAGCTTATCAGCAAGGTTCACGAG
CTTAACGCAATGCCTGATGTACATGGTATATTGGTTCAACTTCCATTGCC
GAAGCATATAAATGAAGAGAAAGTTTTAGGTGAGATAAGCCTTGAGAAGG
ATGTTGATGGCTTTCATCCTTTGAACATTGGCAAGCTCGCAATGAAAGGC
AGAGACCCCCTCTTCCTTCCTTGCACGCCCAAGGGATGCCTTGAACTTCT
GAAACTAAATGGTGTTACTATAAAGGGTAAA
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