CB610672

Overview
NameCB610672
Unique NameCB610672
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length531
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CB610672 vs. ExPASy Swiss-Prot
Match: FOLD_BACAC (Bifunctional protein folD OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=folD PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 4.833e-35
Identity = 79/160 (49.38%), Postives = 109/160 (68.12%), Query Frame = 1 
Query:   52 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKEGQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKLNGVTIKGK 531
            A II G  VA+  R+++ EEV  L E+ G VPGLAV++VG     +SYV  K K C +VGI S  I+ PE ++E  L++++  LN    ++GILVQLPLPKHI E+ ++  IS EKDVDGFHP+++G++ M G+D  FLPCTP G +EL+K   + I GK
Sbjct:    3 AVIIKGNEVAEKKRAQLKEEVVKLKEQ-GIVPGLAVILVGEDPASRSYVKGKEKGCEQVGIYSELIEFPETITEERLLAEIDRLNGDDRINGILVQLPLPKHIEEKAIIERISPEKDVDGFHPISVGRM-MTGQD-TFLPCTPHGIVELVKETNLDISGK 159
[Close]
BLAST of CB610672 vs. ExPASy Swiss-Prot
Match: FOLD_BACAA (Bifunctional protein folD OS=Bacillus anthracis (strain A0248) GN=folD PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 4.833e-35
Identity = 79/160 (49.38%), Postives = 109/160 (68.12%), Query Frame = 1 
Query:   52 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKEGQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKLNGVTIKGK 531
            A II G  VA+  R+++ EEV  L E+ G VPGLAV++VG     +SYV  K K C +VGI S  I+ PE ++E  L++++  LN    ++GILVQLPLPKHI E+ ++  IS EKDVDGFHP+++G++ M G+D  FLPCTP G +EL+K   + I GK
Sbjct:    3 AVIIKGNEVAEKKRAQLKEEVVKLKEQ-GIVPGLAVILVGEDPASRSYVKGKEKGCEQVGIYSELIEFPETITEERLLAEIDRLNGDDRINGILVQLPLPKHIEEKAIIERISPEKDVDGFHPISVGRM-MTGQD-TFLPCTPHGIVELVKETNLDISGK 159
[Close]
BLAST of CB610672 vs. ExPASy Swiss-Prot
Match: FOLD_SHISS (Bifunctional protein folD OS=Shigella sonnei (strain Ss046) GN=folD PE=3 SV=3)

HSP 1 Score: 146.747 bits (369), Expect = 6.312e-35
Identity = 79/151 (52.32%), Postives = 98/151 (64.90%), Query Frame = 1 
Query:   52 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKEGQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLK 504
            A IIDGK +AQ +RSE+A++V+       + PGLAVV+VG     Q YV+ KRKAC EVG  S   DLPE  SEAEL+  +  LNA   + GILVQLPLP  I+  KVL  I  +KDVDGFHP N+G+L    R P   PCTP+G + LL+
Sbjct:    3 AKIIDGKTIAQQVRSEVAQKVQARIAAGLRAPGLAVVLVGSNPASQIYVASKRKACEEVGFVSRSYDLPETTSEAELLELIDALNADNTIDGILVQLPLPAGIDNVKVLERIHPDKDVDGFHPYNVGRLCQ--RAPRLRPCTPRGIVTLLE 151
[Close]
BLAST of CB610672 vs. ExPASy Swiss-Prot
Match: FOLD_SHIFL (Bifunctional protein folD OS=Shigella flexneri GN=folD PE=3 SV=3)

HSP 1 Score: 146.747 bits (369), Expect = 6.312e-35
Identity = 79/151 (52.32%), Postives = 98/151 (64.90%), Query Frame = 1 
Query:   52 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKEGQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLK 504
            A IIDGK +AQ +RSE+A++V+       + PGLAVV+VG     Q YV+ KRKAC EVG  S   DLPE  SEAEL+  +  LNA   + GILVQLPLP  I+  KVL  I  +KDVDGFHP N+G+L    R P   PCTP+G + LL+
Sbjct:    3 AKIIDGKTIAQQVRSEVAQKVQARIAAGLRAPGLAVVLVGSNPASQIYVASKRKACEEVGFVSRSYDLPETTSEAELLELIDALNADNTIDGILVQLPLPAGIDNVKVLERIHPDKDVDGFHPYNVGRLCQ--RAPRLRPCTPRGIVTLLE 151
[Close]
BLAST of CB610672 vs. ExPASy Swiss-Prot
Match: FOLD_SHIF8 (Bifunctional protein folD OS=Shigella flexneri serotype 5b (strain 8401) GN=folD PE=3 SV=2)

HSP 1 Score: 146.747 bits (369), Expect = 6.312e-35
Identity = 79/151 (52.32%), Postives = 98/151 (64.90%), Query Frame = 1 
Query:   52 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKEGQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLK 504
            A IIDGK +AQ +RSE+A++V+       + PGLAVV+VG     Q YV+ KRKAC EVG  S   DLPE  SEAEL+  +  LNA   + GILVQLPLP  I+  KVL  I  +KDVDGFHP N+G+L    R P   PCTP+G + LL+
Sbjct:    3 AKIIDGKTIAQQVRSEVAQKVQARIAAGLRAPGLAVVLVGSNPASQIYVASKRKACEEVGFVSRSYDLPETTSEAELLELIDALNADNTIDGILVQLPLPAGIDNVKVLERIHPDKDVDGFHPYNVGRLCQ--RAPRLRPCTPRGIVTLLE 151
[Close]
BLAST of CB610672 vs. ExPASy Swiss-Prot
Match: FOLD_SHIDS (Bifunctional protein folD OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=folD PE=3 SV=3)

HSP 1 Score: 146.747 bits (369), Expect = 6.312e-35
Identity = 79/151 (52.32%), Postives = 98/151 (64.90%), Query Frame = 1 
Query:   52 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKEGQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLK 504
            A IIDGK +AQ +RSE+A++V+       + PGLAVV+VG     Q YV+ KRKAC EVG  S   DLPE  SEAEL+  +  LNA   + GILVQLPLP  I+  KVL  I  +KDVDGFHP N+G+L    R P   PCTP+G + LL+
Sbjct:    3 AKIIDGKTIAQQVRSEVAQKVQARIAAGLRAPGLAVVLVGSNPASQIYVASKRKACEEVGFVSRSYDLPETTSEAELLELIDALNADNTIDGILVQLPLPAGIDNVKVLERIHPDKDVDGFHPYNVGRLCQ--RAPRLRPCTPRGIVTLLE 151
[Close]
BLAST of CB610672 vs. ExPASy Swiss-Prot
Match: FOLD_SHIBS (Bifunctional protein folD OS=Shigella boydii serotype 4 (strain Sb227) GN=folD PE=3 SV=3)

HSP 1 Score: 146.747 bits (369), Expect = 6.312e-35
Identity = 79/151 (52.32%), Postives = 98/151 (64.90%), Query Frame = 1 
Query:   52 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKEGQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLK 504
            A IIDGK +AQ +RSE+A++V+       + PGLAVV+VG     Q YV+ KRKAC EVG  S   DLPE  SEAEL+  +  LNA   + GILVQLPLP  I+  KVL  I  +KDVDGFHP N+G+L    R P   PCTP+G + LL+
Sbjct:    3 AKIIDGKTIAQQVRSEVAQKVQARIAAGLRAPGLAVVLVGSNPASQIYVASKRKACEEVGFVSRSYDLPETTSEAELLELIDALNADNTIDGILVQLPLPAGIDNVKVLERIHPDKDVDGFHPYNVGRLCQ--RAPRLRPCTPRGIVTLLE 151
[Close]
BLAST of CB610672 vs. ExPASy Swiss-Prot
Match: FOLD_SHIB3 (Bifunctional protein folD OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=folD PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 6.312e-35
Identity = 79/151 (52.32%), Postives = 98/151 (64.90%), Query Frame = 1 
Query:   52 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKEGQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLK 504
            A IIDGK +AQ +RSE+A++V+       + PGLAVV+VG     Q YV+ KRKAC EVG  S   DLPE  SEAEL+  +  LNA   + GILVQLPLP  I+  KVL  I  +KDVDGFHP N+G+L    R P   PCTP+G + LL+
Sbjct:    3 AKIIDGKTIAQQVRSEVAQKVQARIAAGLRAPGLAVVLVGSNPASQIYVASKRKACEEVGFVSRSYDLPETTSEAELLELIDALNADNTIDGILVQLPLPAGIDNVKVLERIHPDKDVDGFHPYNVGRLCQ--RAPRLRPCTPRGIVTLLE 151
[Close]
BLAST of CB610672 vs. ExPASy Swiss-Prot
Match: FOLD_LEGPL (Bifunctional protein folD OS=Legionella pneumophila (strain Lens) GN=folD PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 6.312e-35
Identity = 74/160 (46.25%), Postives = 103/160 (64.38%), Query Frame = 1 
Query:   52 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKEGQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKLNGVTIKGK 531
            A++IDG+ ++   R+E+ + V+   E+  + PGLAVV++G       YVS KRKAC EVGI S   DLP + ++ +LI  ++ELN    + GIL+QLPLPKHINE  ++  I  EKDVDGFHP N+G+LA   R+P   PCTP G + LL    + +K K
Sbjct:    3 ASLIDGREISALRRTELKQRVQYHVEQGQRAPGLAVVLIGNDPASVIYVSNKRKACEEVGITSHSYDLPAETTQEKLIELINELNQSDKIDGILIQLPLPKHINERTIIEHIKPEKDVDGFHPYNLGRLAQ--RNPFLRPCTPLGIMNLLHHYELNVKRK 160
[Close]
BLAST of CB610672 vs. ExPASy Swiss-Prot
Match: FOLD_LEGPC (Bifunctional protein folD OS=Legionella pneumophila (strain Corby) GN=folD PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 6.312e-35
Identity = 74/160 (46.25%), Postives = 103/160 (64.38%), Query Frame = 1 
Query:   52 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKEGQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKLNGVTIKGK 531
            A++IDG+ ++   R+E+ + V+   E+  + PGLAVV++G       YVS KRKAC EVGI S   DLP + ++ +LI  ++ELN    + GIL+QLPLPKHINE  ++  I  EKDVDGFHP N+G+LA   R+P   PCTP G + LL    + +K K
Sbjct:    3 ASLIDGREISALRRTELKQRVQYHVEQGQRAPGLAVVLIGNDPASVIYVSNKRKACEEVGITSHSYDLPAETTQEKLIELINELNQSDKIDGILIQLPLPKHINERTIIEHIKPEKDVDGFHPYNLGRLAQ--RNPFLRPCTPLGIMNLLHHYELNVKRK 160
The following BLAST results are available for this feature:
BLAST of CB610672 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FOLD_BACAC4.833e-3549.38Bifunctional protein folD OS=Bacillus anthracis (s... [more]
FOLD_BACAA4.833e-3549.38Bifunctional protein folD OS=Bacillus anthracis (s... [more]
FOLD_SHISS6.312e-3552.32Bifunctional protein folD OS=Shigella sonnei (stra... [more]
FOLD_SHIFL6.312e-3552.32Bifunctional protein folD OS=Shigella flexneri GN=... [more]
FOLD_SHIF86.312e-3552.32Bifunctional protein folD OS=Shigella flexneri ser... [more]
FOLD_SHIDS6.312e-3552.32Bifunctional protein folD OS=Shigella dysenteriae ... [more]
FOLD_SHIBS6.312e-3552.32Bifunctional protein folD OS=Shigella boydii serot... [more]
FOLD_SHIB36.312e-3552.32Bifunctional protein folD OS=Shigella boydii serot... [more]
FOLD_LEGPL6.312e-3546.25Bifunctional protein folD OS=Legionella pneumophil... [more]
FOLD_LEGPC6.312e-3546.25Bifunctional protein folD OS=Legionella pneumophil... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionALBEDO0003_IIIaF_E04 Mature Albedo Citrus sinensis cDNA clone ALBEDO0003_IIIaF_E04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610672 ID=CB610672; Name=CB610672; organism=Citrus sinensis; type=EST; length=531bp
GGGGATCAAATCTCTAGTTCTAGAATAATGGCGGCACCGTCAGATCAGAA
GGCCACCATAATCGACGGCAAAGCCGTCGCTCAGACCATCCGATCTGAAA
TCGCAGAAGAAGTCCGCCTCCTTTCTGAAAAATATGGCAAGGTGCCTGGA
CTGGCAGTAGTAATAGTGGGTGGCAGAAAAGAGGGTCAAAGCTATGTGAG
CATGAAGAGAAAGGCTTGTGCTGAAGTTGGGATTAAGTCTTTTGACATAG
ACCTCCCCGAGCAAGTCTCCGAGGCCGAGCTTATCAGCAAGGTTCACGAG
CTTAACGCAATGCCTGATGTACATGGTATATTGGTTCAACTTCCATTGCC
GAAGCATATAAATGAAGAGAAAGTTTTAGGTGAGATAAGCCTTGAGAAGG
ATGTTGATGGCTTTCATCCTTTGAACATTGGCAAGCTCGCAATGAAAGGC
AGAGACCCCCTCTTCCTTCCTTGCACGCCCAAGGGATGCCTTGAACTTCT
GAAACTAAATGGTGTTACTATAAAGGGTAAA
back to top