CB610672

Overview
NameCB610672
Unique NameCB610672
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length531
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB610672 vs. ExPASy Swiss-Prot
Match: FOLD_MOOTA (Bifunctional protein folD OS=Moorella thermoacetica (strain ATCC 39073) GN=folD PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 8.807e-37
Identity = 83/160 (51.88%), Postives = 105/160 (65.62%), Query Frame = 1
Query:   52 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKEGQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKLNGVTIKGK 531
            A I+DGK +A  +R+E+ EEV  L  + G  PGLAVV+VG     Q YV  K +AC EVGI S    LP   S+AEL+  + +LN  P +HGILVQLPLP HI+E+KV+  I+LEKDVDGF P N+G L +   D  F PCTP GC+ LL+  G+  KGK
Sbjct:    3 AQILDGKKIAAEVRAEVKEEVSRLKAE-GINPGLAVVLVGEDPASQVYVRNKHRACEEVGIYSEVHRLPAATSQAELLKLIDQLNKDPKIHGILVQLPLPDHIDEKKVIDAIALEKDVDGFSPANVGNLVI--GDKCFYPCTPHGCMVLLEKAGIDPKGK 159          
BLAST of CB610672 vs. ExPASy Swiss-Prot
Match: FOLD_SHEB9 (Bifunctional protein folD OS=Shewanella baltica (strain OS195) GN=folD PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 1.502e-36
Identity = 81/159 (50.94%), Postives = 102/159 (64.15%), Query Frame = 1
Query:   52 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKEGQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKLNGVTIKG 528
            A IIDGKA+AQ+IR++++E+V    E   ++PGLAVV+VG     Q YV  KRKAC EVG  S   DL    SE EL+S +  LN  P + GILVQLPLP HI + KV+  I  +KDVDGFHP N+G+LA   R P+   CTP G + L+K  GV   G
Sbjct:    3 AQIIDGKAIAQSIRTKLSEKVTARKEAGQRIPGLAVVLVGADPASQVYVGSKRKACEEVGFISRSYDLETSCSEDELLSLIDSLNEDPTIDGILVQLPLPAHIEDSKVIERIRPDKDVDGFHPYNVGRLAQ--RIPVLRSCTPMGIMTLIKSTGVDTYG 159          
BLAST of CB610672 vs. ExPASy Swiss-Prot
Match: FOLD_SHESW (Bifunctional protein folD OS=Shewanella sp. (strain W3-18-1) GN=folD PE=3 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 1.962e-36
Identity = 81/159 (50.94%), Postives = 102/159 (64.15%), Query Frame = 1
Query:   52 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKEGQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKLNGVTIKG 528
            A IIDGKA+AQ+IR++++E+V    E   +VPGLAV++VG     Q YV  KRKAC EVG  S   DL    SE EL+S +  LN  P + GILVQLPLP HI + KV+  I  +KDVDGFHP N+G+LA   R P+   CTP G + L+K  GV   G
Sbjct:    3 AQIIDGKAIAQSIRTKLSEKVTARKEAGQRVPGLAVILVGADPASQVYVGSKRKACEEVGFISRSYDLETNCSEDELLSLIDSLNDDPTIDGILVQLPLPAHIEDSKVIERIRPDKDVDGFHPYNVGRLAQ--RIPVLRSCTPMGIMTLIKSTGVDTYG 159          
BLAST of CB610672 vs. ExPASy Swiss-Prot
Match: FOLD_SHEB8 (Bifunctional protein folD OS=Shewanella baltica (strain OS185) GN=folD PE=3 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 1.962e-36
Identity = 81/159 (50.94%), Postives = 102/159 (64.15%), Query Frame = 1
Query:   52 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKEGQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKLNGVTIKG 528
            A IIDGKA+AQ+IR++++E+V    E   ++PGLAVV+VG     Q YV  KRKAC EVG  S   DL    SE EL+S +  LN  P + GILVQLPLP HI + KV+  I  +KDVDGFHP N+G+LA   R P+   CTP G + L+K  GV   G
Sbjct:    3 AQIIDGKAIAQSIRTKLSEKVTARKEAGQRIPGLAVVLVGADPASQVYVGSKRKACEEVGFISRSYDLETSCSEDELLSLIDSLNDDPTIDGILVQLPLPAHIEDSKVIERIRPDKDVDGFHPYNVGRLAQ--RIPVLRSCTPMGIMTLIKSTGVDTYG 159          
BLAST of CB610672 vs. ExPASy Swiss-Prot
Match: FOLD_SHEB5 (Bifunctional protein folD OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=folD PE=3 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 1.962e-36
Identity = 81/159 (50.94%), Postives = 102/159 (64.15%), Query Frame = 1
Query:   52 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKEGQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKLNGVTIKG 528
            A IIDGKA+AQ+IR++++E+V    E   ++PGLAVV+VG     Q YV  KRKAC EVG  S   DL    SE EL+S +  LN  P + GILVQLPLP HI + KV+  I  +KDVDGFHP N+G+LA   R P+   CTP G + L+K  GV   G
Sbjct:    3 AQIIDGKAIAQSIRTKLSEKVTARKEAGQRIPGLAVVLVGADPASQVYVGSKRKACEEVGFISRSYDLETSCSEDELLSLIDSLNDDPTIDGILVQLPLPAHIEDSKVIERIRPDKDVDGFHPYNVGRLAQ--RIPVLRSCTPMGIMTLIKSTGVDTYG 159          
BLAST of CB610672 vs. ExPASy Swiss-Prot
Match: FOLD_SHEB2 (Bifunctional protein folD OS=Shewanella baltica (strain OS223) GN=folD PE=3 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 1.962e-36
Identity = 81/159 (50.94%), Postives = 102/159 (64.15%), Query Frame = 1
Query:   52 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKEGQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKLNGVTIKG 528
            A IIDGKA+AQ+IR++++E+V    E   ++PGLAVV+VG     Q YV  KRKAC EVG  S   DL    SE EL+S +  LN  P + GILVQLPLP HI + KV+  I  +KDVDGFHP N+G+LA   R P+   CTP G + L+K  GV   G
Sbjct:    3 AQIIDGKAIAQSIRTKLSEKVTARKEAGQRIPGLAVVLVGADPASQVYVGSKRKACEEVGFISRSYDLETSCSEDELLSLIDSLNDDPTIDGILVQLPLPAHIEDSKVIERIRPDKDVDGFHPYNVGRLAQ--RIPVLRSCTPMGIMTLIKSTGVDTYG 159          
BLAST of CB610672 vs. ExPASy Swiss-Prot
Match: FOLD_GEOKA (Bifunctional protein folD OS=Geobacillus kaustophilus GN=folD PE=3 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 1.962e-36
Identity = 82/160 (51.25%), Postives = 105/160 (65.62%), Query Frame = 1
Query:   52 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKEGQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKLNGVTIKGK 531
            A II G  +A+TIR+ +A+E   L    G  PGLAV++VG      SYV  K+KACAEVGI+SF    P  + E  L++K+ ELN  P VHGILVQLPLP HI E  V+  I+ EKDVDGFHP+N+GK+ +  R   FLPCTP G L +++  G+ I GK
Sbjct:    3 AQIISGTEMARTIRTALADEAAQLKAD-GVEPGLAVILVGDDPASHSYVKGKQKACAEVGIRSFLYTFPAAIDEETLLAKIRELNVDPAVHGILVQLPLPDHICEWSVIETIAPEKDVDGFHPINVGKMMIGQR--AFLPCTPHGILVMVQSAGIDIAGK 159          
BLAST of CB610672 vs. ExPASy Swiss-Prot
Match: FOLD2_COLP3 (Bifunctional protein folD 2 OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=folD2 PE=3 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 1.962e-36
Identity = 79/160 (49.38%), Postives = 104/160 (65.00%), Query Frame = 1
Query:   49 KATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKEGQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKLNGVTIKG 528
            +A++IDGKA+A+ +R  + EEV L      +VPGLAV++VG     Q YV  KRKAC EVG  S   DLP   SE EL++ V ELN    + GILVQLPLPK++N + ++  I+  KDVDGFHP N+GKL +  R P   PCTPKG + L++  G+  KG
Sbjct:    2 RASLIDGKAIAKKLRDSVKEEVNLRISNGQRVPGLAVILVGCDPASQVYVGSKRKACEEVGFISRSYDLPHTTSEQELLALVSELNNDDSIDGILVQLPLPKNLNADLIIEHINPLKDVDGFHPSNVGKLVL--RQPGLRPCTPKGIVTLIESTGIDPKG 159          
BLAST of CB610672 vs. ExPASy Swiss-Prot
Match: FOLD_SHEFN (Bifunctional protein folD OS=Shewanella frigidimarina (strain NCIMB 400) GN=folD PE=3 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 2.563e-36
Identity = 77/159 (48.43%), Postives = 104/159 (65.41%), Query Frame = 1
Query:   52 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKEGQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKLNGVTIKG 528
            A IIDGKA+AQ+IR+ + ++V    +   + PGLAV++VG     Q YV  KRKAC EVG +S   DL  + +EAEL++ + E NA P + GILVQLPLP HI++ KV+  I  +KDVDGFHP N+G+LA   R P+   CTP G + L+K  G+   G
Sbjct:    3 AQIIDGKAIAQSIRTTLKQKVTQRRQAGFRAPGLAVILVGSDAASQVYVGSKRKACEEVGFESQSFDLDTETTEAELLALIDECNANPSIDGILVQLPLPAHIDDSKVIERIRPDKDVDGFHPYNVGRLAQ--RIPVLRSCTPMGIMTLIKSTGIDTYG 159          
BLAST of CB610672 vs. ExPASy Swiss-Prot
Match: FOLD_SHESH (Bifunctional protein folD OS=Shewanella sediminis (strain HAW-EB3) GN=folD PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 3.347e-36
Identity = 78/156 (50.00%), Postives = 101/156 (64.74%), Query Frame = 1
Query:   61 IDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKEGQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKLNGVTIKG 528
            IDGKA+AQ+IR+++ E+V    E   +VPGLAV++VG     Q YV  KR+AC EVG  S   DL    SEAEL++ + E N  P + GILVQLPLP+HI E KV+  I  +KDVDGFHP N+G+LA   R P+   CTP G + L+K  G+   G
Sbjct:    6 IDGKAIAQSIRTQLKEKVTARKEAGQRVPGLAVILVGADPASQVYVGSKRRACEEVGFLSRSYDLDTTTSEAELLTLIDECNEDPAIDGILVQLPLPEHIEESKVIERIRPDKDVDGFHPYNVGRLAQ--RIPVLRSCTPMGIMTLIKTTGIDTYG 159          
The following BLAST results are available for this feature:
BLAST of CB610672 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FOLD_MOOTA8.807e-3751.88Bifunctional protein folD OS=Moorella thermoacetic... [more]
FOLD_SHEB91.502e-3650.94Bifunctional protein folD OS=Shewanella baltica (s... [more]
FOLD_SHESW1.962e-3650.94Bifunctional protein folD OS=Shewanella sp. (strai... [more]
FOLD_SHEB81.962e-3650.94Bifunctional protein folD OS=Shewanella baltica (s... [more]
FOLD_SHEB51.962e-3650.94Bifunctional protein folD OS=Shewanella baltica (s... [more]
FOLD_SHEB21.962e-3650.94Bifunctional protein folD OS=Shewanella baltica (s... [more]
FOLD_GEOKA1.962e-3651.25Bifunctional protein folD OS=Geobacillus kaustophi... [more]
FOLD2_COLP31.962e-3649.38Bifunctional protein folD 2 OS=Colwellia psychrery... [more]
FOLD_SHEFN2.563e-3648.43Bifunctional protein folD OS=Shewanella frigidimar... [more]
FOLD_SHESH3.347e-3650.00Bifunctional protein folD OS=Shewanella sediminis ... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0003_IIIaF_E04 Mature Albedo Citrus sinensis cDNA clone ALBEDO0003_IIIaF_E04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610672 ID=CB610672; Name=CB610672; organism=Citrus sinensis; type=EST; length=531bp
GGGGATCAAATCTCTAGTTCTAGAATAATGGCGGCACCGTCAGATCAGAA
GGCCACCATAATCGACGGCAAAGCCGTCGCTCAGACCATCCGATCTGAAA
TCGCAGAAGAAGTCCGCCTCCTTTCTGAAAAATATGGCAAGGTGCCTGGA
CTGGCAGTAGTAATAGTGGGTGGCAGAAAAGAGGGTCAAAGCTATGTGAG
CATGAAGAGAAAGGCTTGTGCTGAAGTTGGGATTAAGTCTTTTGACATAG
ACCTCCCCGAGCAAGTCTCCGAGGCCGAGCTTATCAGCAAGGTTCACGAG
CTTAACGCAATGCCTGATGTACATGGTATATTGGTTCAACTTCCATTGCC
GAAGCATATAAATGAAGAGAAAGTTTTAGGTGAGATAAGCCTTGAGAAGG
ATGTTGATGGCTTTCATCCTTTGAACATTGGCAAGCTCGCAATGAAAGGC
AGAGACCCCCTCTTCCTTCCTTGCACGCCCAAGGGATGCCTTGAACTTCT
GAAACTAAATGGTGTTACTATAAAGGGTAAA
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