CB610672

Overview
NameCB610672
Unique NameCB610672
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length531
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB610672 vs. ExPASy Swiss-Prot
Match: FOLD_BREBN (Bifunctional protein folD OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=folD PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 7.456e-36
Identity = 84/160 (52.50%), Postives = 107/160 (66.88%), Query Frame = 1
Query:   52 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKEGQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKLNGVTIKGK 531
            ATI+ GK VAQ+IR+E+A EV  L +K G VPGL VVIVG      SYV  K K C EVGI S  I     ++E EL+  + +LN  P+V+GILVQLPLP HI+E  V+  I+ EKDVDGFHP++IG + + G D + LPCTP G +EL+K  G  + GK
Sbjct:    3 ATILQGKEVAQSIRAELANEVVEL-KKQGVVPGLTVVIVGDDPASHSYVRGKAKGCEEVGISSEIIRKDADITEEELLVIIQQLNENPNVNGILVQLPLPAHISEHAVIEAIAPEKDVDGFHPISIGNMVL-GNDTM-LPCTPHGIIELIKRTGTQMAGK 159          
BLAST of CB610672 vs. ExPASy Swiss-Prot
Match: FOLD1_PSEMY (Bifunctional protein folD 1 OS=Pseudomonas mendocina (strain ymp) GN=folD1 PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 7.456e-36
Identity = 78/159 (49.06%), Postives = 105/159 (66.04%), Query Frame = 1
Query:   52 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKEGQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKLNGVTIKG 528
            A +IDGKA+A ++R +IA+ V    ++  + PGLAV++VG     Q YVS KRK C EVG  S   DLP + S+A+L++ + ELN  P + GILVQLPLP+H++   +L  I  +KDVDGFHP NIG+LA   R PL  PCTPKG + LL+  G  + G
Sbjct:    3 AQLIDGKAIAASLRQQIAQRVAERRQQGLRAPGLAVILVGTDPASQVYVSHKRKDCEEVGFLSRAYDLPAETSQADLLALIDELNEDPTIDGILVQLPLPEHLDSSLLLERIRPDKDVDGFHPYNIGRLAQ--RMPLLRPCTPKGIMTLLESTGADLYG 159          
BLAST of CB610672 vs. ExPASy Swiss-Prot
Match: FOLD_SHEWM (Bifunctional protein folD OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=folD PE=3 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 9.738e-36
Identity = 78/159 (49.06%), Postives = 101/159 (63.52%), Query Frame = 1
Query:   52 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKEGQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKLNGVTIKG 528
            A  IDGKA+AQ+IR+++ E+V    E   +VPGLAV++VG     Q YV  KR+AC EVG  S   DL    +E +L+S + E N  P + GILVQLPLP+HI E KV+  I  +KDVDGFHP N+G+LA   R P+   CTP G + L+K  GV   G
Sbjct:    3 AQTIDGKAIAQSIRTQLKEKVTARKEAGKRVPGLAVILVGADPASQVYVGSKRRACEEVGFLSRSYDLESSTTEEQLLSLIDECNQDPAIDGILVQLPLPEHIEESKVIERIRPDKDVDGFHPYNVGRLAQ--RIPVLRSCTPMGIMTLIKSTGVDTYG 159          
BLAST of CB610672 vs. ExPASy Swiss-Prot
Match: FOLD_SHEPC (Bifunctional protein folD OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=folD PE=3 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 9.738e-36
Identity = 79/159 (49.69%), Postives = 102/159 (64.15%), Query Frame = 1
Query:   52 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKEGQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKLNGVTIKG 528
            A IIDGKA+AQ+IR++++E+V    E   +VPGLAV++VG     Q YV  KRKAC EVG  S   DL    +E EL++ +  LN  P + GILVQLPLP HI + KV+  I  +KDVDGFHP N+G+LA   R P+   CTP G + L+K  GV   G
Sbjct:    3 AQIIDGKAIAQSIRTKLSEKVTARKEAGQRVPGLAVILVGADPASQVYVGSKRKACEEVGFISRSYDLETNCTEDELLNLIDSLNDDPTIDGILVQLPLPAHIEDSKVIERIRPDKDVDGFHPYNVGRLAQ--RIPVLRSCTPMGIMTLIKSTGVDTYG 159          
BLAST of CB610672 vs. ExPASy Swiss-Prot
Match: FOLD_PHOPR (Bifunctional protein folD OS=Photobacterium profundum GN=folD PE=3 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 9.738e-36
Identity = 79/160 (49.38%), Postives = 101/160 (63.12%), Query Frame = 1
Query:   52 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKEGQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKLNGVTIKGK 531
            A IIDGK +AQT+R E+A  V+   E   + PGLAVV+VG     Q YVS KRKAC EVG  S   DLP    E EL++ ++ELN   ++ GILVQLPLP  I+   +L  I  EKDVDGFHP N+G+L+   R P    CTPKG + LL+   + ++GK
Sbjct:    3 AQIIDGKLIAQTVRQEVAARVKARVEAGLRAPGLAVVLVGQDPASQIYVSSKRKACEEVGFISQSFDLPANTKEIELLALINELNTNKEIDGILVQLPLPAGIDTTNILEHIDPEKDVDGFHPYNVGRLSQ--RIPKLRSCTPKGIITLLERYNIPVRGK 160          
BLAST of CB610672 vs. ExPASy Swiss-Prot
Match: FOLD_EXIS2 (Bifunctional protein folD OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=folD PE=3 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 9.738e-36
Identity = 81/160 (50.62%), Postives = 107/160 (66.88%), Query Frame = 1
Query:   52 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKEGQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKLNGVTIKGK 531
            A +IDGK VAQ+ R ++ EEV  L E+  + P L V+++G     QSYV  K KA  E+G+ S  I LPE+  E+EL+  +  LNA   VHGILVQLPLPKHI+E KV+  I+ EKDVDGFHP+++GK+ +   +P FLPCTP G L L+K   V I G+
Sbjct:    2 AVVIDGKQVAQSYRLKLKEEVARLKEERIQ-PKLTVILIGEDPASQSYVRGKEKAAQEIGMDSDLIRLPEETKESELLHLIERLNADASVHGILVQLPLPKHIDESKVIFAIAPEKDVDGFHPVSVGKMMI--GEPTFLPCTPNGILHLVKEMNVPIAGR 158          
BLAST of CB610672 vs. ExPASy Swiss-Prot
Match: FOLD_SHESR (Bifunctional protein folD OS=Shewanella sp. (strain MR-7) GN=folD PE=3 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 1.272e-35
Identity = 79/159 (49.69%), Postives = 101/159 (63.52%), Query Frame = 1
Query:   52 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKEGQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKLNGVTIKG 528
            A IIDGKA+AQ+IR+++ E+V    E   +VPGLAV++VG     Q YV  KRKAC EVG  S   DL    +E  L++ + ELN  P + GILVQLPLP HI + KV+  I  +KDVDGFHP N+G+LA   R P+   CTP G + L+K  GV   G
Sbjct:    3 AQIIDGKAIAQSIRTQLREKVTARKEAGQRVPGLAVILVGADPASQVYVGSKRKACEEVGFISRSYDLDTSYTEEALLALIDELNDDPTIDGILVQLPLPAHIEDSKVIERIRPDKDVDGFHPYNVGRLAQ--RIPVLRSCTPMGIMTLIKSTGVDTYG 159          
BLAST of CB610672 vs. ExPASy Swiss-Prot
Match: FOLD_SHESM (Bifunctional protein folD OS=Shewanella sp. (strain MR-4) GN=folD PE=3 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 1.272e-35
Identity = 79/159 (49.69%), Postives = 101/159 (63.52%), Query Frame = 1
Query:   52 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKEGQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKLNGVTIKG 528
            A IIDGKA+AQ+IR+++ E+V    E   +VPGLAV++VG     Q YV  KRKAC EVG  S   DL    +E  L++ + ELN  P + GILVQLPLP HI + KV+  I  +KDVDGFHP N+G+LA   R P+   CTP G + L+K  GV   G
Sbjct:    3 AQIIDGKAIAQSIRTQLREKVTARKEAGQRVPGLAVILVGADPASQVYVGSKRKACEEVGFISRSYDLDTSYTEEALLALIDELNDDPTIDGILVQLPLPAHIEDSKVIERIRPDKDVDGFHPYNVGRLAQ--RIPVLRSCTPMGIMTLIKSTGVDTYG 159          
BLAST of CB610672 vs. ExPASy Swiss-Prot
Match: FOLD_SHESA (Bifunctional protein folD OS=Shewanella sp. (strain ANA-3) GN=folD PE=3 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 1.272e-35
Identity = 79/159 (49.69%), Postives = 101/159 (63.52%), Query Frame = 1
Query:   52 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKEGQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKLNGVTIKG 528
            A IIDGKA+AQ+IR+++ E+V    E   +VPGLAV++VG     Q YV  KRKAC EVG  S   DL    +E  L++ + ELN  P + GILVQLPLP HI + KV+  I  +KDVDGFHP N+G+LA   R P+   CTP G + L+K  GV   G
Sbjct:    3 AQIIDGKAIAQSIRTQLREKVTARKEAGQRVPGLAVILVGADPASQVYVGSKRKACEEVGFISRSYDLDTSYTEEALLALIDELNDDPTIDGILVQLPLPAHIEDSKVIERIRPDKDVDGFHPYNVGRLAQ--RIPVLRSCTPMGIMTLIKSTGVDTYG 159          
BLAST of CB610672 vs. ExPASy Swiss-Prot
Match: FOLD_SHEDO (Bifunctional protein folD OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=folD PE=3 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 1.272e-35
Identity = 77/159 (48.43%), Postives = 104/159 (65.41%), Query Frame = 1
Query:   52 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKEGQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKLNGVTIKG 528
            A +IDGKA+AQTIRS + ++V    E   + PGLAV++VG     + YV  KR+AC EVG +S   DL    SEA+L++ + + N  P + GILVQLPLP+HI++ KV+  I  +KDVDGFHP N+G+LA   R P+  PCTP G + L+K  GV   G
Sbjct:    3 AQLIDGKAIAQTIRSTLKQKVAARIEAGKRAPGLAVILVGLDAASKIYVGSKRRACEEVGFESRSFDLDINTSEADLLALIDKCNQDPSIDGILVQLPLPEHIDDSKVIERIRPDKDVDGFHPYNVGRLAQ--RIPVLRPCTPLGIMTLIKSTGVDTYG 159          
The following BLAST results are available for this feature:
BLAST of CB610672 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FOLD_BREBN7.456e-3652.50Bifunctional protein folD OS=Brevibacillus brevis ... [more]
FOLD1_PSEMY7.456e-3649.06Bifunctional protein folD 1 OS=Pseudomonas mendoci... [more]
FOLD_SHEWM9.738e-3649.06Bifunctional protein folD OS=Shewanella woodyi (st... [more]
FOLD_SHEPC9.738e-3649.69Bifunctional protein folD OS=Shewanella putrefacie... [more]
FOLD_PHOPR9.738e-3649.38Bifunctional protein folD OS=Photobacterium profun... [more]
FOLD_EXIS29.738e-3650.63Bifunctional protein folD OS=Exiguobacterium sibir... [more]
FOLD_SHESR1.272e-3549.69Bifunctional protein folD OS=Shewanella sp. (strai... [more]
FOLD_SHESM1.272e-3549.69Bifunctional protein folD OS=Shewanella sp. (strai... [more]
FOLD_SHESA1.272e-3549.69Bifunctional protein folD OS=Shewanella sp. (strai... [more]
FOLD_SHEDO1.272e-3548.43Bifunctional protein folD OS=Shewanella denitrific... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0003_IIIaF_E04 Mature Albedo Citrus sinensis cDNA clone ALBEDO0003_IIIaF_E04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610672 ID=CB610672; Name=CB610672; organism=Citrus sinensis; type=EST; length=531bp
GGGGATCAAATCTCTAGTTCTAGAATAATGGCGGCACCGTCAGATCAGAA
GGCCACCATAATCGACGGCAAAGCCGTCGCTCAGACCATCCGATCTGAAA
TCGCAGAAGAAGTCCGCCTCCTTTCTGAAAAATATGGCAAGGTGCCTGGA
CTGGCAGTAGTAATAGTGGGTGGCAGAAAAGAGGGTCAAAGCTATGTGAG
CATGAAGAGAAAGGCTTGTGCTGAAGTTGGGATTAAGTCTTTTGACATAG
ACCTCCCCGAGCAAGTCTCCGAGGCCGAGCTTATCAGCAAGGTTCACGAG
CTTAACGCAATGCCTGATGTACATGGTATATTGGTTCAACTTCCATTGCC
GAAGCATATAAATGAAGAGAAAGTTTTAGGTGAGATAAGCCTTGAGAAGG
ATGTTGATGGCTTTCATCCTTTGAACATTGGCAAGCTCGCAATGAAAGGC
AGAGACCCCCTCTTCCTTCCTTGCACGCCCAAGGGATGCCTTGAACTTCT
GAAACTAAATGGTGTTACTATAAAGGGTAAA
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