CB610672

Overview
NameCB610672
Unique NameCB610672
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length531
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB610672 vs. ExPASy Swiss-Prot
Match: FOLD_MYCVP (Bifunctional protein folD OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) GN=folD PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 1.362e-29
Identity = 70/159 (44.03%), Postives = 93/159 (58.49%), Query Frame = 1
Query:   52 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKEGQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKLNGVTIKG 528
            A  +DGKA    I  ++ E V  L+   G+ PGL  V+VG     Q+YV  K   CA+VGI+S   DLP  +S+  L+  + ELNA P   G +VQLPLPKH+NE   L  I   KD DG HP+N+G+L +   +P  LPCTP+G + LL+   V I G
Sbjct:    6 AITLDGKATRDEIFVDLKERVTALTAA-GRTPGLGTVLVGDDPGSQAYVRGKHADCAKVGIESIRRDLPADISQETLLETLDELNANPACTGYIVQLPLPKHLNENAALERIDPGKDADGLHPMNLGRLVL--NEPAALPCTPRGIVHLLRRYQVEIAG 161          
BLAST of CB610672 vs. ExPASy Swiss-Prot
Match: FOLD_HELPY (Bifunctional protein folD OS=Helicobacter pylori GN=folD PE=3 SV=2)

HSP 1 Score: 129.028 bits (323), Expect = 1.362e-29
Identity = 68/159 (42.77%), Postives = 104/159 (65.41%), Query Frame = 1
Query:   58 IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKEGQSYVSMKRKACAEVGIKSFDID-LPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKLNGVTIKGK 531
            ++DG+A+A  I  ++  ++++++ +  K P LAV++VG      +YV+MK KAC  VG+  FD+  L E ++EA+L+S + + N   ++ G+LVQLPLP+HI+ + +L  I   KDVDGFHPLNIGKL  +     FLP TP G + LL+   + IKGK
Sbjct:    8 LLDGQALADNIEKDLKHKIQIITAQTHKRPKLAVILVGKDPASITYVNMKIKACERVGM-DFDLKTLQENITEAKLLSLIKDYNTDQNISGVLVQLPLPRHIDTKMILEAIDPNKDVDGFHPLNIGKLCTQKES--FLPATPMGVMRLLEHYHIEIKGK 163          
BLAST of CB610672 vs. ExPASy Swiss-Prot
Match: FOLD_HERAR (Bifunctional protein folD OS=Herminiimonas arsenicoxydans GN=folD PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 1.779e-29
Identity = 73/160 (45.62%), Postives = 100/160 (62.50%), Query Frame = 1
Query:   52 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKEGQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKLNGVTIKGK 531
            A IIDG  ++Q +R ++A     LS K GK PGLAV++VG     Q YV  K KAC + G+ S        ++EA L++++  LN  P +HGILVQ+PLPKHI+  KV+  IS  KDVDG+  L+ G+L + G  P F PCTP GC++L++  G  I GK
Sbjct:    3 AHIIDGNLLSQQLRQDVATRAAALSAK-GKQPGLAVILVGADPASQVYVRNKVKACEDNGLFSLLEKYEADMTEAALLARIAALNNDPAIHGILVQMPLPKHIDPTKVIEAISPRKDVDGYSVLSAGEL-LTGL-PGFRPCTPYGCMKLIESTGTKIAGK 159          
BLAST of CB610672 vs. ExPASy Swiss-Prot
Match: FOLD_XANOR (Bifunctional protein folD OS=Xanthomonas oryzae pv. oryzae GN=folD PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 2.323e-29
Identity = 69/167 (41.32%), Postives = 99/167 (59.28%), Query Frame = 1
Query:   31 AAPSDQKATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKEGQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKLNGVTIKGK 531
            A  +   A ++DG+ +A+ +   +   V          PGLAVV+VGG      YV  KR+A  +VGI++FD DLP+  SEAEL + + ELNA P +HGIL+QLPLP   +  +++  I   KDVDGFHP N+G LA+  R+    PCTP+G + LL      ++G+
Sbjct:    5 APAASTSARLLDGRRIAEELLDGLKSRVDARLAAGKARPGLAVVLVGGDPASSVYVRNKRRAAEKVGIEAFDYDLPQCTSEAELAALIDELNADPKIHGILIQLPLPGIPDANRLIQRIDPRKDVDGFHPQNVGHLAL--REFGLRPCTPRGIVTLLSHTDQPVRGR 169          
BLAST of CB610672 vs. ExPASy Swiss-Prot
Match: FOLD_XANOP (Bifunctional protein folD OS=Xanthomonas oryzae pv. oryzae (strain PXO99A) GN=folD PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 2.323e-29
Identity = 69/167 (41.32%), Postives = 99/167 (59.28%), Query Frame = 1
Query:   31 AAPSDQKATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKEGQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKLNGVTIKGK 531
            A  +   A ++DG+ +A+ +   +   V          PGLAVV+VGG      YV  KR+A  +VGI++FD DLP+  SEAEL + + ELNA P +HGIL+QLPLP   +  +++  I   KDVDGFHP N+G LA+  R+    PCTP+G + LL      ++G+
Sbjct:    5 APAASTSARLLDGRRIAEELLDGLKSRVDARLAAGKARPGLAVVLVGGDPASSVYVRNKRRAAEKVGIEAFDYDLPQCTSEAELAALIDELNADPKIHGILIQLPLPGIPDANRLIQRIDPRKDVDGFHPQNVGHLAL--REFGLRPCTPRGIVTLLSHTDQPVRGR 169          
BLAST of CB610672 vs. ExPASy Swiss-Prot
Match: FOLD_XANOM (Bifunctional protein folD OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=folD PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 2.323e-29
Identity = 69/167 (41.32%), Postives = 99/167 (59.28%), Query Frame = 1
Query:   31 AAPSDQKATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKEGQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKLNGVTIKGK 531
            A  +   A ++DG+ +A+ +   +   V          PGLAVV+VGG      YV  KR+A  +VGI++FD DLP+  SEAEL + + ELNA P +HGIL+QLPLP   +  +++  I   KDVDGFHP N+G LA+  R+    PCTP+G + LL      ++G+
Sbjct:    5 APAASTSARLLDGRRIAEELLDGLKSRVDARLAAGKARPGLAVVLVGGDPASSVYVRNKRRAAEKVGIEAFDYDLPQCTSEAELAALIDELNADPKIHGILIQLPLPGIPDANRLIQRIDPRKDVDGFHPQNVGHLAL--REFGLRPCTPRGIVTLLSHTDQPVRGR 169          
BLAST of CB610672 vs. ExPASy Swiss-Prot
Match: FOLD_SYNP6 (Bifunctional protein folD OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=folD PE=3 SV=2)

HSP 1 Score: 128.257 bits (321), Expect = 2.323e-29
Identity = 71/160 (44.38%), Postives = 97/160 (60.62%), Query Frame = 1
Query:   52 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKEGQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKLNGVTIKGK 531
            A I+DG+A+A   R ++ E+V  ++   G+ PGLAV++VG       YV  K +AC + GI SF   LP   SEAE+ + + ELN    V GILVQLPLP H++   +L  I  EKD DG HPLN+G+L ++G + L   CTP G +ELL  N +   GK
Sbjct:    3 AAILDGRALAAQRRQQLREQVEAIAPAVGRRPGLAVIMVGDNPASAVYVRNKERACEQTGIVSFGKHLPGDSSEAEIRALIEELNQDDRVDGILVQLPLPSHLDAVPLLLAIDPEKDADGLHPLNLGRL-LRGEEGL-RSCTPAGVMELLAANQIDPAGK 160          
BLAST of CB610672 vs. ExPASy Swiss-Prot
Match: FOLD_SYNE7 (Bifunctional protein folD OS=Synechococcus elongatus (strain PCC 7942) GN=folD PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 2.323e-29
Identity = 71/160 (44.38%), Postives = 97/160 (60.62%), Query Frame = 1
Query:   52 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKEGQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKLNGVTIKGK 531
            A I+DG+A+A   R ++ E+V  ++   G+ PGLAV++VG       YV  K +AC + GI SF   LP   SEAE+ + + ELN    V GILVQLPLP H++   +L  I  EKD DG HPLN+G+L ++G + L   CTP G +ELL  N +   GK
Sbjct:    3 AAILDGRALAAQRRQQLREQVEAIAPAVGRRPGLAVIMVGDNPASAVYVRNKERACEQTGIVSFGKHLPGDSSEAEIRALIEELNQDDRVDGILVQLPLPSHLDAVPLLLAIDPEKDADGLHPLNLGRL-LRGEEGL-RSCTPAGVMELLAANQIDPAGK 160          
BLAST of CB610672 vs. ExPASy Swiss-Prot
Match: FOLD_STRGG (Bifunctional protein folD OS=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) GN=folD PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 2.323e-29
Identity = 68/159 (42.77%), Postives = 99/159 (62.26%), Query Frame = 1
Query:   52 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKEGQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKLNGVTIKG 528
            A I+DGKA A  I+S++   V  L  + G  PGL  ++VG     + YV+ K + CA+VGI S   +LP+  ++ E+   V ELNA P+  G +VQLPLPK I+  +VL  +  EKD DG HP+++G+L +    P  LPCTP+G ++LL+ +GV I G
Sbjct:    3 AQILDGKATAAAIKSDLTVRVAALKAQ-GITPGLGTLLVGDDPGSRWYVNGKHRDCAQVGIGSIQRELPDTATQEEIEEVVRELNANPECTGYIVQLPLPKGIDTNRVLELMDPEKDADGLHPMSLGRLVLNETGP--LPCTPQGVVQLLRAHGVEING 158          
BLAST of CB610672 vs. ExPASy Swiss-Prot
Match: FOLD_STAS1 (Bifunctional protein folD OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=folD PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 2.323e-29
Identity = 69/160 (43.12%), Postives = 102/160 (63.75%), Query Frame = 1
Query:   52 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKEGQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKLNGVTIKGK 531
            A I+DGK +A+  R  + ++V  L  + G  P L+V++VG     QSYV+ K+KA  ++G+ S  + L E  SEA++++++  LN    V GILVQ+PLP  ++E+KVL  I+  KDVDGFHP NIGKL +      F+PCTP G +ELL    + ++GK
Sbjct:    3 AKILDGKQIAKDYRQGLKDQVEALQAE-GYTPKLSVILVGNDGASQSYVNSKKKAAEKIGMISEIVHLDESTSEADVLNELKRLNEDDSVSGILVQVPLPDQVSEQKVLESINPAKDVDGFHPENIGKLYID--QQTFVPCTPLGIMELLNHADIDLEGK 159          
The following BLAST results are available for this feature:
BLAST of CB610672 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FOLD_MYCVP1.362e-2944.03Bifunctional protein folD OS=Mycobacterium vanbaal... [more]
FOLD_HELPY1.362e-2942.77Bifunctional protein folD OS=Helicobacter pylori G... [more]
FOLD_HERAR1.779e-2945.63Bifunctional protein folD OS=Herminiimonas arsenic... [more]
FOLD_XANOR2.323e-2941.32Bifunctional protein folD OS=Xanthomonas oryzae pv... [more]
FOLD_XANOP2.323e-2941.32Bifunctional protein folD OS=Xanthomonas oryzae pv... [more]
FOLD_XANOM2.323e-2941.32Bifunctional protein folD OS=Xanthomonas oryzae pv... [more]
FOLD_SYNP62.323e-2944.38Bifunctional protein folD OS=Synechococcus sp. (st... [more]
FOLD_SYNE72.323e-2944.38Bifunctional protein folD OS=Synechococcus elongat... [more]
FOLD_STRGG2.323e-2942.77Bifunctional protein folD OS=Streptomyces griseus ... [more]
FOLD_STAS12.323e-2943.13Bifunctional protein folD OS=Staphylococcus saprop... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0003_IIIaF_E04 Mature Albedo Citrus sinensis cDNA clone ALBEDO0003_IIIaF_E04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610672 ID=CB610672; Name=CB610672; organism=Citrus sinensis; type=EST; length=531bp
GGGGATCAAATCTCTAGTTCTAGAATAATGGCGGCACCGTCAGATCAGAA
GGCCACCATAATCGACGGCAAAGCCGTCGCTCAGACCATCCGATCTGAAA
TCGCAGAAGAAGTCCGCCTCCTTTCTGAAAAATATGGCAAGGTGCCTGGA
CTGGCAGTAGTAATAGTGGGTGGCAGAAAAGAGGGTCAAAGCTATGTGAG
CATGAAGAGAAAGGCTTGTGCTGAAGTTGGGATTAAGTCTTTTGACATAG
ACCTCCCCGAGCAAGTCTCCGAGGCCGAGCTTATCAGCAAGGTTCACGAG
CTTAACGCAATGCCTGATGTACATGGTATATTGGTTCAACTTCCATTGCC
GAAGCATATAAATGAAGAGAAAGTTTTAGGTGAGATAAGCCTTGAGAAGG
ATGTTGATGGCTTTCATCCTTTGAACATTGGCAAGCTCGCAATGAAAGGC
AGAGACCCCCTCTTCCTTCCTTGCACGCCCAAGGGATGCCTTGAACTTCT
GAAACTAAATGGTGTTACTATAAAGGGTAAA
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