CB610672

Overview
NameCB610672
Unique NameCB610672
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length531
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB610672 vs. ExPASy Swiss-Prot
Match: FOLD_PARD8 (Bifunctional protein folD OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) GN=folD PE=3 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 1.272e-35
Identity = 77/163 (47.24%), Postives = 107/163 (65.64%), Query Frame = 1
Query:   43 DQKATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKEGQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKLNGVTIKGK 531
            +Q   ++DGKAV+  ++ E+AEEV  +    GK+P LA ++VG     ++YV+ K K C E+G KS  I   E V+E EL+ KV ELN  PDV G +VQLPLPKHI+E+KV+  I   KDVDGFHP+N+G++++    P F+  TP G LELLK   +  +GK
Sbjct:    3 EQHYQLLDGKAVSAQMKKEMAEEVAQIKAAGGKIPHLAAILVGHDGGSETYVASKVKTCQEIGFKSTLIRFEEDVTEEELLRKVDELNNDPDVDGFIVQLPLPKHISEQKVIEAIDYRKDVDGFHPINVGRMSI--GLPCFVSATPAGILELLKRYHIETQGK 163          
BLAST of CB610672 vs. ExPASy Swiss-Prot
Match: FOLD_BACCR (Bifunctional protein folD OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=folD PE=3 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 1.272e-35
Identity = 80/160 (50.00%), Postives = 110/160 (68.75%), Query Frame = 1
Query:   52 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKEGQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKLNGVTIKGK 531
            A II G  VA+  R+++ EEV  L E+ G VPGLAV++VG     +SYV  K K C +VGI S  I+LPE ++E  L++++  LN    ++GILVQLPLPKHI E+ ++  IS EKDVDGFHP+++G++ M G+D  FLPCTP G +EL+K   + I GK
Sbjct:    3 AVIIKGNEVAEKKRAQLTEEVVKLKEQ-GIVPGLAVILVGEDPASRSYVKGKEKGCEQVGIYSELIELPETITEERLLAEIDRLNGDDRINGILVQLPLPKHIEEKAIIERISPEKDVDGFHPISVGRM-MTGQD-TFLPCTPHGIVELVKETNLDISGK 159          
BLAST of CB610672 vs. ExPASy Swiss-Prot
Match: FOLD_BACC4 (Bifunctional protein folD OS=Bacillus cereus (strain B4264) GN=folD PE=3 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 1.272e-35
Identity = 80/160 (50.00%), Postives = 110/160 (68.75%), Query Frame = 1
Query:   52 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKEGQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKLNGVTIKGK 531
            A II G  VA+  R+++ EEV  L E+ G VPGLAV++VG     +SYV  K K C +VGI S  I+LPE ++E  L++++  LN    ++GILVQLPLPKHI E+ ++  IS EKDVDGFHP+++G++ M G+D  FLPCTP G +EL+K   + I GK
Sbjct:    3 AVIIKGNEVAEKKRAQLTEEVVKLKEQ-GIVPGLAVILVGEDPASRSYVKGKEKGCEQVGIYSELIELPETITEERLLAEIDRLNGDDRINGILVQLPLPKHIEEKAIIERISPEKDVDGFHPISVGRM-MTGQD-TFLPCTPHGIVELVKETSLDISGK 159          
BLAST of CB610672 vs. ExPASy Swiss-Prot
Match: FOLD_BACC2 (Bifunctional protein folD OS=Bacillus cereus (strain G9842) GN=folD PE=3 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 1.272e-35
Identity = 80/160 (50.00%), Postives = 110/160 (68.75%), Query Frame = 1
Query:   52 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKEGQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKLNGVTIKGK 531
            A II G  VA+  R+++ EEV  L E+ G VPGLAV++VG     +SYV  K K C +VGI S  I+LPE ++E  L++++  LN    ++GILVQLPLPKHI E+ ++  IS EKDVDGFHP+++G++ M G+D  FLPCTP G +EL+K   + I GK
Sbjct:    3 AVIIKGNEVAEKKRAQLTEEVVKLKEQ-GIVPGLAVILVGEDPASRSYVKGKEKGCEQVGIYSELIELPETITEERLLAEIDRLNGDDRINGILVQLPLPKHIEEKAIIERISPEKDVDGFHPISVGRM-MTGQD-TFLPCTPHGIVELVKETNLDISGK 159          
BLAST of CB610672 vs. ExPASy Swiss-Prot
Match: FOLD2_ARTAT (Bifunctional protein folD 2 OS=Arthrobacter aurescens (strain TC1) GN=folD2 PE=3 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 1.272e-35
Identity = 76/162 (46.91%), Postives = 106/162 (65.43%), Query Frame = 1
Query:   52 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKEGQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLA--MKGRDPLFLPCTPKGCLELLKLNGVTIKGK 531
            A I+DGKA A  I++E+   V +L+ K G VPGL  ++VG       YV  K K CAEVGI+S   DLPE +S+ +L+  V ELN  P+  G +VQLPLPKHI+++ +L  +  +KD DG HP+N+G+L   + G     LPCTPKGC+ELL+ + + +KGK
Sbjct:    6 AQILDGKATAAAIKAELTTRVSVLAAK-GIVPGLGTILVGSDPGSTWYVGGKHKDCAEVGIQSIRRDLPEDISQEDLLEVVRELNDNPECTGYIVQLPLPKHIDQDVILEAMDPDKDADGLHPMNLGRLVANVNGEMKSPLPCTPKGCVELLRRHNIELKGK 166          
BLAST of CB610672 vs. ExPASy Swiss-Prot
Match: FOLD_SHEPA (Bifunctional protein folD OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=folD PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 1.661e-35
Identity = 79/156 (50.64%), Postives = 99/156 (63.46%), Query Frame = 1
Query:   61 IDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKEGQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKLNGVTIKG 528
            IDGKA+AQ+IR+++ ++V    E   +VPGLAV++VG     Q YV  KRKAC EVG  S   DL    SE  L+S + E N  P + GILVQLPLP+HI E KV+  I  +KDVDGFHP N+G+LA   R P+   CTP G + LLK  GV   G
Sbjct:    6 IDGKAIAQSIRTQLKDKVTARKEAGKRVPGLAVILVGADPASQVYVGSKRKACEEVGFISRSYDLDSSTSEDALLSLIDECNEDPTIDGILVQLPLPEHIEESKVIERIRPDKDVDGFHPYNVGRLAQ--RIPVLRSCTPMGIMTLLKSTGVDTFG 159          
BLAST of CB610672 vs. ExPASy Swiss-Prot
Match: FOLD_SALTI (Bifunctional protein folD OS=Salmonella typhi GN=folD PE=3 SV=2)

HSP 1 Score: 148.673 bits (374), Expect = 1.661e-35
Identity = 80/159 (50.31%), Postives = 102/159 (64.15%), Query Frame = 1
Query:   52 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKEGQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKLNGVTIKG 528
            A IIDGK +AQ +RSE+A++V+       + PGLAVV+VG     Q YV+ KRKAC EVG  S   DLPE  SEAEL++ +  LNA   + GILVQLPLP  I+  KVL  I+ +KDVDGFHP N+G+L    R P   PCTP+G + LL+   +   G
Sbjct:    3 AKIIDGKTIAQQVRSEVAQKVQARVAAGLRAPGLAVVLVGSNPASQIYVASKRKACDEVGFVSHSYDLPETTSEAELLALIDTLNADNTIDGILVQLPLPAGIDNVKVLERIAPDKDVDGFHPYNVGRLCQ--RAPRLRPCTPRGIVTLLERYNIDTYG 159          
BLAST of CB610672 vs. ExPASy Swiss-Prot
Match: FOLD_METBU (Bifunctional protein folD OS=Methanococcoides burtonii (strain DSM 6242) GN=folD PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 1.661e-35
Identity = 71/165 (43.03%), Postives = 104/165 (63.03%), Query Frame = 1
Query:   37 PSDQKATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKEGQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKLNGVTIKGK 531
            P      IIDG+A+A+ + +E+  +V  L  + G  PGL+ ++VG     + YV +K KAC  VGI + D  LPE +++ EL+  +  LNA  D+HGIL+QLPLPKH+NE++ +  I   KD DGFHP N+G+L +   +   +PCTPKG +  L+  GV I+GK
Sbjct:    2 PDTDNTKIIDGRAIAKKVEAEVKADVERLVREKGITPGLSAILVGEDPASKMYVRLKHKACGRVGIFAEDQHLPEDITQEELLEAISSLNARKDIHGILLQLPLPKHLNEQEAMNAIDPAKDADGFHPFNMGQLLIGVEE--LVPCTPKGIIRALEEYGVEIQGK 164          
BLAST of CB610672 vs. ExPASy Swiss-Prot
Match: FOLD_RHORT (Bifunctional protein folD OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=folD PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 2.169e-35
Identity = 80/153 (52.29%), Postives = 101/153 (66.01%), Query Frame = 1
Query:   52 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKEGQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAM--KGRDPLFLPCTPKGCLELLK 504
            A +IDGKA+AQ +R  IA+EV  L    G VPGLAVV+VG     Q YV  K K    VG+ S    L    SEAE+++KV  LNA P + GILVQLPLP HI+E+K+L  I  +KDVDGFHP+N+G+L++     +   +PCTPKGCL LLK
Sbjct:    3 AHLIDGKAIAQQLRERIAQEVADLKAHRGLVPGLAVVLVGEDAASQVYVGSKEKMAVAVGMHSVVCRLAATTSEAEVLAKVEALNADPTIDGILVQLPLPAHIDEDKILLAIDPDKDVDGFHPVNVGRLSIGQSNGEHGMVPCTPKGCLMLLK 155          
BLAST of CB610672 vs. ExPASy Swiss-Prot
Match: FOLD_BACCN (Bifunctional protein folD OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=folD PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 2.169e-35
Identity = 79/160 (49.38%), Postives = 110/160 (68.75%), Query Frame = 1
Query:   52 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKEGQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKLNGVTIKGK 531
            A II G  VA+  R+++ EEV  L E+ G VPGLAV++VG     +SY+  K+K C +VGI S  I+ P+ ++E  L++++  LN    ++GILVQLPLPKHI E+ ++  IS +KDVDGFHP+NIG++ M G+D  FLPCTP G LEL+K   + I GK
Sbjct:    3 AVIIKGNEVAEKKRAQLKEEVVKLKEQ-GIVPGLAVILVGEDPASRSYIKGKQKGCEQVGIYSELIEFPDTITEERLLAEIDRLNEDDRINGILVQLPLPKHIEEKAIIERISPKKDVDGFHPINIGRM-MTGQD-TFLPCTPHGILELVKETNIDISGK 159          
The following BLAST results are available for this feature:
BLAST of CB610672 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FOLD_PARD81.272e-3547.24Bifunctional protein folD OS=Parabacteroides dista... [more]
FOLD_BACCR1.272e-3550.00Bifunctional protein folD OS=Bacillus cereus (stra... [more]
FOLD_BACC41.272e-3550.00Bifunctional protein folD OS=Bacillus cereus (stra... [more]
FOLD_BACC21.272e-3550.00Bifunctional protein folD OS=Bacillus cereus (stra... [more]
FOLD2_ARTAT1.272e-3546.91Bifunctional protein folD 2 OS=Arthrobacter auresc... [more]
FOLD_SHEPA1.661e-3550.64Bifunctional protein folD OS=Shewanella pealeana (... [more]
FOLD_SALTI1.661e-3550.31Bifunctional protein folD OS=Salmonella typhi GN=f... [more]
FOLD_METBU1.661e-3543.03Bifunctional protein folD OS=Methanococcoides burt... [more]
FOLD_RHORT2.169e-3552.29Bifunctional protein folD OS=Rhodospirillum rubrum... [more]
FOLD_BACCN2.169e-3549.38Bifunctional protein folD OS=Bacillus cereus subsp... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0003_IIIaF_E04 Mature Albedo Citrus sinensis cDNA clone ALBEDO0003_IIIaF_E04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610672 ID=CB610672; Name=CB610672; organism=Citrus sinensis; type=EST; length=531bp
GGGGATCAAATCTCTAGTTCTAGAATAATGGCGGCACCGTCAGATCAGAA
GGCCACCATAATCGACGGCAAAGCCGTCGCTCAGACCATCCGATCTGAAA
TCGCAGAAGAAGTCCGCCTCCTTTCTGAAAAATATGGCAAGGTGCCTGGA
CTGGCAGTAGTAATAGTGGGTGGCAGAAAAGAGGGTCAAAGCTATGTGAG
CATGAAGAGAAAGGCTTGTGCTGAAGTTGGGATTAAGTCTTTTGACATAG
ACCTCCCCGAGCAAGTCTCCGAGGCCGAGCTTATCAGCAAGGTTCACGAG
CTTAACGCAATGCCTGATGTACATGGTATATTGGTTCAACTTCCATTGCC
GAAGCATATAAATGAAGAGAAAGTTTTAGGTGAGATAAGCCTTGAGAAGG
ATGTTGATGGCTTTCATCCTTTGAACATTGGCAAGCTCGCAATGAAAGGC
AGAGACCCCCTCTTCCTTCCTTGCACGCCCAAGGGATGCCTTGAACTTCT
GAAACTAAATGGTGTTACTATAAAGGGTAAA
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