CB610672

Overview
NameCB610672
Unique NameCB610672
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length531
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB610672 vs. ExPASy Swiss-Prot
Match: FOLD_STRP6 (Bifunctional protein folD OS=Streptococcus pyogenes serotype M6 GN=folD PE=3 SV=2)

HSP 1 Score: 147.902 bits (372), Expect = 2.833e-35
Identity = 78/158 (49.37%), Postives = 105/158 (66.46%), Query Frame = 1
Query:   58 IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKEGQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKLNGVTIKGK 531
            +IDGKA+AQ ++ E+A +V  L +K G VPGLAV++VG     Q YV  K +A   VG KS  + L E + + ELI+ +   NA   +HGILVQLPLP HIN++K++  I  +KDVDGFHP+N G L   GR PL +PCTP G +ELL+   V ++GK
Sbjct:    4 LIDGKALAQKMQQELAAKVNNLKQKKGIVPGLAVILVGDDPASQVYVRNKERAALTVGFKSETVRLSEFICQEELIAVIERYNADNTIHGILVQLPLPNHINDKKIILAIDPKKDVDGFHPMNTGHL-WSGR-PLMVPCTPSGIMELLREYNVNLEGK 159          
BLAST of CB610672 vs. ExPASy Swiss-Prot
Match: FOLD_STRP3 (Bifunctional protein folD OS=Streptococcus pyogenes serotype M3 GN=folD PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 2.833e-35
Identity = 78/158 (49.37%), Postives = 105/158 (66.46%), Query Frame = 1
Query:   58 IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKEGQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKLNGVTIKGK 531
            +IDGKA+AQ ++ E+A +V  L +K G VPGLAV++VG     Q YV  K +A   VG KS  + L E + + ELI+ +   NA   +HGILVQLPLP HIN++K++  I  +KDVDGFHP+N G L   GR PL +PCTP G +ELL+   V ++GK
Sbjct:    4 LIDGKALAQKMQQELAAKVNNLKQKKGIVPGLAVILVGDDPASQVYVRNKERAALTVGFKSETVRLSEFICQEELIAVIERYNADNTIHGILVQLPLPNHINDKKIILAIDPKKDVDGFHPMNTGHL-WSGR-PLMVPCTPSGIMELLREYNVNLEGK 159          
BLAST of CB610672 vs. ExPASy Swiss-Prot
Match: FOLD_STRP1 (Bifunctional protein folD OS=Streptococcus pyogenes serotype M1 GN=folD PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 2.833e-35
Identity = 78/158 (49.37%), Postives = 105/158 (66.46%), Query Frame = 1
Query:   58 IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKEGQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKLNGVTIKGK 531
            +IDGKA+AQ ++ E+A +V  L +K G VPGLAV++VG     Q YV  K +A   VG KS  + L E + + ELI+ +   NA   +HGILVQLPLP HIN++K++  I  +KDVDGFHP+N G L   GR PL +PCTP G +ELL+   V ++GK
Sbjct:    4 LIDGKALAQKMQQELAAKVNNLKQKKGIVPGLAVILVGDDPASQVYVRNKERAALTVGFKSETVRLSEFICQEELIAVIERYNADNTIHGILVQLPLPNHINDKKIILAIDPKKDVDGFHPMNTGHL-WSGR-PLMVPCTPSGIMELLREYNVNLEGK 159          
BLAST of CB610672 vs. ExPASy Swiss-Prot
Match: FOLD_STRA5 (Bifunctional protein folD OS=Streptococcus agalactiae serotype V GN=folD PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 2.833e-35
Identity = 72/158 (45.57%), Postives = 107/158 (67.72%), Query Frame = 1
Query:   58 IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKEGQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKLNGVTIKGK 531
            +IDGKA++Q +++E+  +V  L E++G +PGLAV++VG     Q YV  K ++  E G KS  + L E +S+ ELI  +H+ N    +HGILVQLPLP+HIN++K++  I  +KDVDGFHP+N G L   GR P+ +PCTP G +E+ +   V ++GK
Sbjct:    4 LIDGKALSQKMQAELGRKVERLKEQHGIIPGLAVILVGDNPASQVYVRNKERSALEAGFKSETLRLSESISQEELIDIIHQYNEDKSIHGILVQLPLPQHINDKKIILAIDPKKDVDGFHPMNTGHL-WSGR-PMMVPCTPAGIMEMFREYHVDLEGK 159          
BLAST of CB610672 vs. ExPASy Swiss-Prot
Match: FOLD_STRA3 (Bifunctional protein folD OS=Streptococcus agalactiae serotype III GN=folD PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 2.833e-35
Identity = 72/158 (45.57%), Postives = 107/158 (67.72%), Query Frame = 1
Query:   58 IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKEGQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKLNGVTIKGK 531
            +IDGKA++Q +++E+  +V  L E++G +PGLAV++VG     Q YV  K ++  E G KS  + L E +S+ ELI  +H+ N    +HGILVQLPLP+HIN++K++  I  +KDVDGFHP+N G L   GR P+ +PCTP G +E+ +   V ++GK
Sbjct:    4 LIDGKALSQKMQAELGRKVERLKEQHGIIPGLAVILVGDNPASQVYVRNKERSALEAGFKSETLRLSESISQEELIDIIHQYNEDKSIHGILVQLPLPQHINDKKIILAIDPKKDVDGFHPMNTGHL-WSGR-PMMVPCTPAGIMEMFREYHVDLEGK 159          
BLAST of CB610672 vs. ExPASy Swiss-Prot
Match: FOLD_STRA1 (Bifunctional protein folD OS=Streptococcus agalactiae serotype Ia GN=folD PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 2.833e-35
Identity = 72/158 (45.57%), Postives = 107/158 (67.72%), Query Frame = 1
Query:   58 IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKEGQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKLNGVTIKGK 531
            +IDGKA++Q +++E+  +V  L E++G +PGLAV++VG     Q YV  K ++  E G KS  + L E +S+ ELI  +H+ N    +HGILVQLPLP+HIN++K++  I  +KDVDGFHP+N G L   GR P+ +PCTP G +E+ +   V ++GK
Sbjct:    4 LIDGKALSQKMQAELGRKVERLKEQHGIIPGLAVILVGDNPASQVYVRNKERSALEAGFKSETLRLSESISQEELIDIIHQYNEDKSIHGILVQLPLPQHINDKKIILAIDPKKDVDGFHPMNTGHL-WSGR-PMMVPCTPAGIMEMFREYHVDLEGK 159          
BLAST of CB610672 vs. ExPASy Swiss-Prot
Match: FOLD_SALTY (Bifunctional protein folD OS=Salmonella typhimurium GN=folD PE=3 SV=2)

HSP 1 Score: 147.902 bits (372), Expect = 2.833e-35
Identity = 80/159 (50.31%), Postives = 102/159 (64.15%), Query Frame = 1
Query:   52 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKEGQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKLNGVTIKG 528
            A IIDGK +AQ +RSE+A++V+       + PGLAVV+VG     Q YV+ KRKAC EVG  S   DLPE  SEAEL++ +  LNA   + GILVQLPLP  I+  KVL  I+ +KDVDGFHP N+G+L    R P   PCTP+G + LL+   +   G
Sbjct:    3 AKIIDGKTIAQQVRSEVAQKVQARVAAGLRAPGLAVVLVGSNPASQIYVASKRKACDEVGFVSRSYDLPETTSEAELLALIDTLNADNTIDGILVQLPLPAGIDNVKVLERIAPDKDVDGFHPYNVGRLCQ--RAPRLRPCTPRGIVTLLERYNIDTYG 159          
BLAST of CB610672 vs. ExPASy Swiss-Prot
Match: FOLD_SALSV (Bifunctional protein folD OS=Salmonella schwarzengrund (strain CVM19633) GN=folD PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 2.833e-35
Identity = 80/159 (50.31%), Postives = 102/159 (64.15%), Query Frame = 1
Query:   52 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKEGQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKLNGVTIKG 528
            A IIDGK +AQ +RSE+A++V+       + PGLAVV+VG     Q YV+ KRKAC EVG  S   DLPE  SEAEL++ +  LNA   + GILVQLPLP  I+  KVL  I+ +KDVDGFHP N+G+L    R P   PCTP+G + LL+   +   G
Sbjct:    3 AKIIDGKTIAQQVRSEVAQKVQARVAAGLRAPGLAVVLVGSNPASQIYVASKRKACDEVGFVSRSYDLPETTSEAELLALIDTLNADNTIDGILVQLPLPAGIDNVKVLERIAPDKDVDGFHPYNVGRLCQ--RAPRLRPCTPRGIVTLLERYNIDTYG 159          
BLAST of CB610672 vs. ExPASy Swiss-Prot
Match: FOLD_SALPK (Bifunctional protein folD OS=Salmonella paratyphi A (strain AKU_12601) GN=folD PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 2.833e-35
Identity = 80/159 (50.31%), Postives = 102/159 (64.15%), Query Frame = 1
Query:   52 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKEGQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKLNGVTIKG 528
            A IIDGK +AQ +RSE+A++V+       + PGLAVV+VG     Q YV+ KRKAC EVG  S   DLPE  SEAEL++ +  LNA   + GILVQLPLP  I+  KVL  I+ +KDVDGFHP N+G+L    R P   PCTP+G + LL+   +   G
Sbjct:    3 AKIIDGKTIAQQVRSEVAQKVQARVAAGLRAPGLAVVLVGSNPASQIYVASKRKACDEVGFVSRSYDLPETTSEAELLALIDTLNADNTIDGILVQLPLPAGIDNVKVLERIAPDKDVDGFHPYNVGRLCQ--RAPRLRPCTPRGIVTLLERYNIDTYG 159          
BLAST of CB610672 vs. ExPASy Swiss-Prot
Match: FOLD_SALPC (Bifunctional protein folD OS=Salmonella paratyphi C (strain RKS4594) GN=folD PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 2.833e-35
Identity = 80/159 (50.31%), Postives = 102/159 (64.15%), Query Frame = 1
Query:   52 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKEGQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKLNGVTIKG 528
            A IIDGK +AQ +RSE+A++V+       + PGLAVV+VG     Q YV+ KRKAC EVG  S   DLPE  SEAEL++ +  LNA   + GILVQLPLP  I+  KVL  I+ +KDVDGFHP N+G+L    R P   PCTP+G + LL+   +   G
Sbjct:    3 AKIIDGKTIAQQVRSEVAQKVQARVAAGLRAPGLAVVLVGSNPASQIYVASKRKACDEVGFVSRSYDLPETTSEAELLALIDTLNADNTIDGILVQLPLPAGIDNVKVLERIAPDKDVDGFHPYNVGRLCQ--RAPRLRPCTPRGIVTLLERYNIDTYG 159          
The following BLAST results are available for this feature:
BLAST of CB610672 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FOLD_STRP62.833e-3549.37Bifunctional protein folD OS=Streptococcus pyogene... [more]
FOLD_STRP32.833e-3549.37Bifunctional protein folD OS=Streptococcus pyogene... [more]
FOLD_STRP12.833e-3549.37Bifunctional protein folD OS=Streptococcus pyogene... [more]
FOLD_STRA52.833e-3545.57Bifunctional protein folD OS=Streptococcus agalact... [more]
FOLD_STRA32.833e-3545.57Bifunctional protein folD OS=Streptococcus agalact... [more]
FOLD_STRA12.833e-3545.57Bifunctional protein folD OS=Streptococcus agalact... [more]
FOLD_SALTY2.833e-3550.31Bifunctional protein folD OS=Salmonella typhimuriu... [more]
FOLD_SALSV2.833e-3550.31Bifunctional protein folD OS=Salmonella schwarzeng... [more]
FOLD_SALPK2.833e-3550.31Bifunctional protein folD OS=Salmonella paratyphi ... [more]
FOLD_SALPC2.833e-3550.31Bifunctional protein folD OS=Salmonella paratyphi ... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0003_IIIaF_E04 Mature Albedo Citrus sinensis cDNA clone ALBEDO0003_IIIaF_E04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610672 ID=CB610672; Name=CB610672; organism=Citrus sinensis; type=EST; length=531bp
GGGGATCAAATCTCTAGTTCTAGAATAATGGCGGCACCGTCAGATCAGAA
GGCCACCATAATCGACGGCAAAGCCGTCGCTCAGACCATCCGATCTGAAA
TCGCAGAAGAAGTCCGCCTCCTTTCTGAAAAATATGGCAAGGTGCCTGGA
CTGGCAGTAGTAATAGTGGGTGGCAGAAAAGAGGGTCAAAGCTATGTGAG
CATGAAGAGAAAGGCTTGTGCTGAAGTTGGGATTAAGTCTTTTGACATAG
ACCTCCCCGAGCAAGTCTCCGAGGCCGAGCTTATCAGCAAGGTTCACGAG
CTTAACGCAATGCCTGATGTACATGGTATATTGGTTCAACTTCCATTGCC
GAAGCATATAAATGAAGAGAAAGTTTTAGGTGAGATAAGCCTTGAGAAGG
ATGTTGATGGCTTTCATCCTTTGAACATTGGCAAGCTCGCAATGAAAGGC
AGAGACCCCCTCTTCCTTCCTTGCACGCCCAAGGGATGCCTTGAACTTCT
GAAACTAAATGGTGTTACTATAAAGGGTAAA
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