CB610672

Overview
NameCB610672
Unique NameCB610672
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length531
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CB610672 vs. ExPASy Swiss-Prot
Match: FOLD_SALPB (Bifunctional protein folD OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=folD PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 2.833e-35
Identity = 80/159 (50.31%), Postives = 102/159 (64.15%), Query Frame = 1 
Query:   52 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKEGQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKLNGVTIKG 528
            A IIDGK +AQ +RSE+A++V+       + PGLAVV+VG     Q YV+ KRKAC EVG  S   DLPE  SEAEL++ +  LNA   + GILVQLPLP  I+  KVL  I+ +KDVDGFHP N+G+L    R P   PCTP+G + LL+   +   G
Sbjct:    3 AKIIDGKTIAQQVRSEVAQKVQARVAAGLRAPGLAVVLVGSNPASQIYVASKRKACDEVGFVSRSYDLPETTSEAELLALIDTLNADNTIDGILVQLPLPAGIDNVKVLERIAPDKDVDGFHPYNVGRLCQ--RAPRLRPCTPRGIVTLLERYNIDTYG 159
[Close]
BLAST of CB610672 vs. ExPASy Swiss-Prot
Match: FOLD_SALPA (Bifunctional protein folD OS=Salmonella paratyphi A GN=folD PE=3 SV=3)

HSP 1 Score: 147.902 bits (372), Expect = 2.833e-35
Identity = 80/159 (50.31%), Postives = 102/159 (64.15%), Query Frame = 1 
Query:   52 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKEGQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKLNGVTIKG 528
            A IIDGK +AQ +RSE+A++V+       + PGLAVV+VG     Q YV+ KRKAC EVG  S   DLPE  SEAEL++ +  LNA   + GILVQLPLP  I+  KVL  I+ +KDVDGFHP N+G+L    R P   PCTP+G + LL+   +   G
Sbjct:    3 AKIIDGKTIAQQVRSEVAQKVQARVAAGLRAPGLAVVLVGSNPASQIYVASKRKACDEVGFVSRSYDLPETTSEAELLALIDTLNADNTIDGILVQLPLPAGIDNVKVLERIAPDKDVDGFHPYNVGRLCQ--RAPRLRPCTPRGIVTLLERYNIDTYG 159
[Close]
BLAST of CB610672 vs. ExPASy Swiss-Prot
Match: FOLD_SALNS (Bifunctional protein folD OS=Salmonella newport (strain SL254) GN=folD PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 2.833e-35
Identity = 80/159 (50.31%), Postives = 102/159 (64.15%), Query Frame = 1 
Query:   52 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKEGQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKLNGVTIKG 528
            A IIDGK +AQ +RSE+A++V+       + PGLAVV+VG     Q YV+ KRKAC EVG  S   DLPE  SEAEL++ +  LNA   + GILVQLPLP  I+  KVL  I+ +KDVDGFHP N+G+L    R P   PCTP+G + LL+   +   G
Sbjct:    3 AKIIDGKTIAQQVRSEVAQKVQARVAAGLRAPGLAVVLVGSNPASQIYVASKRKACDEVGFVSRSYDLPETTSEAELLALIDTLNADNTIDGILVQLPLPAGIDNVKVLERIAPDKDVDGFHPYNVGRLCQ--RAPRLRPCTPRGIVTLLERYNIDTYG 159
[Close]
BLAST of CB610672 vs. ExPASy Swiss-Prot
Match: FOLD_SALHS (Bifunctional protein folD OS=Salmonella heidelberg (strain SL476) GN=folD PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 2.833e-35
Identity = 80/159 (50.31%), Postives = 102/159 (64.15%), Query Frame = 1 
Query:   52 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKEGQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKLNGVTIKG 528
            A IIDGK +AQ +RSE+A++V+       + PGLAVV+VG     Q YV+ KRKAC EVG  S   DLPE  SEAEL++ +  LNA   + GILVQLPLP  I+  KVL  I+ +KDVDGFHP N+G+L    R P   PCTP+G + LL+   +   G
Sbjct:    3 AKIIDGKTIAQQVRSEVAQKVQARVAAGLRAPGLAVVLVGSNPASQIYVASKRKACDEVGFVSRSYDLPETTSEAELLALIDTLNADNTIDGILVQLPLPAGIDNVKVLERIAPDKDVDGFHPYNVGRLCQ--RAPRLRPCTPRGIVTLLERYNIDTYG 159
[Close]
BLAST of CB610672 vs. ExPASy Swiss-Prot
Match: FOLD_SALG2 (Bifunctional protein folD OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=folD PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 2.833e-35
Identity = 80/159 (50.31%), Postives = 102/159 (64.15%), Query Frame = 1 
Query:   52 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKEGQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKLNGVTIKG 528
            A IIDGK +AQ +RSE+A++V+       + PGLAVV+VG     Q YV+ KRKAC EVG  S   DLPE  SEAEL++ +  LNA   + GILVQLPLP  I+  KVL  I+ +KDVDGFHP N+G+L    R P   PCTP+G + LL+   +   G
Sbjct:    3 AKIIDGKTIAQQVRSEVAQKVQARVAAGLRAPGLAVVLVGSNPASQIYVASKRKACDEVGFVSRSYDLPETTSEAELLALIDTLNADNTIDGILVQLPLPAGIDNVKVLERIAPDKDVDGFHPYNVGRLCQ--RAPRLRPCTPRGIVTLLERYNIDTYG 159
[Close]
BLAST of CB610672 vs. ExPASy Swiss-Prot
Match: FOLD_SALEP (Bifunctional protein folD OS=Salmonella enteritidis PT4 (strain P125109) GN=folD PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 2.833e-35
Identity = 80/159 (50.31%), Postives = 102/159 (64.15%), Query Frame = 1 
Query:   52 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKEGQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKLNGVTIKG 528
            A IIDGK +AQ +RSE+A++V+       + PGLAVV+VG     Q YV+ KRKAC EVG  S   DLPE  SEAEL++ +  LNA   + GILVQLPLP  I+  KVL  I+ +KDVDGFHP N+G+L    R P   PCTP+G + LL+   +   G
Sbjct:    3 AKIIDGKTIAQQVRSEVAQKVQARVAAGLRAPGLAVVLVGSNPASQIYVASKRKACDEVGFVSRSYDLPETTSEAELLALIDTLNADNTIDGILVQLPLPAGIDNVKVLERIAPDKDVDGFHPYNVGRLCQ--RAPRLRPCTPRGIVTLLERYNIDTYG 159
[Close]
BLAST of CB610672 vs. ExPASy Swiss-Prot
Match: FOLD_SALDC (Bifunctional protein folD OS=Salmonella dublin (strain CT_02021853) GN=folD PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 2.833e-35
Identity = 80/159 (50.31%), Postives = 102/159 (64.15%), Query Frame = 1 
Query:   52 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKEGQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKLNGVTIKG 528
            A IIDGK +AQ +RSE+A++V+       + PGLAVV+VG     Q YV+ KRKAC EVG  S   DLPE  SEAEL++ +  LNA   + GILVQLPLP  I+  KVL  I+ +KDVDGFHP N+G+L    R P   PCTP+G + LL+   +   G
Sbjct:    3 AKIIDGKTIAQQVRSEVAQKVQARVAAGLRAPGLAVVLVGSNPASQIYVASKRKACDEVGFVSRSYDLPETTSEAELLALIDTLNADNTIDGILVQLPLPAGIDNVKVLERIAPDKDVDGFHPYNVGRLCQ--RAPRLRPCTPRGIVTLLERYNIDTYG 159
[Close]
BLAST of CB610672 vs. ExPASy Swiss-Prot
Match: FOLD_SALCH (Bifunctional protein folD OS=Salmonella choleraesuis GN=folD PE=3 SV=3)

HSP 1 Score: 147.902 bits (372), Expect = 2.833e-35
Identity = 80/159 (50.31%), Postives = 102/159 (64.15%), Query Frame = 1 
Query:   52 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKEGQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKLNGVTIKG 528
            A IIDGK +AQ +RSE+A++V+       + PGLAVV+VG     Q YV+ KRKAC EVG  S   DLPE  SEAEL++ +  LNA   + GILVQLPLP  I+  KVL  I+ +KDVDGFHP N+G+L    R P   PCTP+G + LL+   +   G
Sbjct:    3 AKIIDGKTIAQQVRSEVAQKVQARVAAGLRAPGLAVVLVGSNPASQIYVASKRKACDEVGFVSRSYDLPETTSEAELLALIDTLNADNTIDGILVQLPLPAGIDNVKVLERIAPDKDVDGFHPYNVGRLCQ--RAPRLRPCTPRGIVTLLERYNIDTYG 159
[Close]
BLAST of CB610672 vs. ExPASy Swiss-Prot
Match: FOLD_SALAR (Bifunctional protein folD OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=folD PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 2.833e-35
Identity = 80/159 (50.31%), Postives = 101/159 (63.52%), Query Frame = 1 
Query:   52 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKEGQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKLNGVTIKG 528
            A IIDGK +AQ +RSE+A++V+       + PGLAVV+VG     Q YV+ KRKAC EVG  S   DLPE  SEAEL+  +  LNA   + GILVQLPLP  I+  KVL  I+ +KDVDGFHP N+G+L    R P   PCTP+G + LL+   +   G
Sbjct:    3 AKIIDGKTIAQQVRSEVAQKVQARVAAGLRAPGLAVVLVGSNPASQIYVASKRKACDEVGFVSRSYDLPETTSEAELLELIDTLNADSTIDGILVQLPLPAGIDNVKVLERIAPDKDVDGFHPYNVGRLCQ--RAPRLRPCTPRGIVTLLERYNIDTYG 159
[Close]
BLAST of CB610672 vs. ExPASy Swiss-Prot
Match: FOLD_SALA4 (Bifunctional protein folD OS=Salmonella agona (strain SL483) GN=folD PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 2.833e-35
Identity = 80/159 (50.31%), Postives = 102/159 (64.15%), Query Frame = 1 
Query:   52 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKEGQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKLNGVTIKG 528
            A IIDGK +AQ +RSE+A++V+       + PGLAVV+VG     Q YV+ KRKAC EVG  S   DLPE  SEAEL++ +  LNA   + GILVQLPLP  I+  KVL  I+ +KDVDGFHP N+G+L    R P   PCTP+G + LL+   +   G
Sbjct:    3 AKIIDGKTIAQQVRSEVAQKVQARVAAGLRAPGLAVVLVGSNPASQIYVASKRKACDEVGFVSRSYDLPETTSEAELLALIDTLNADNTIDGILVQLPLPAGIDNVKVLERIAPDKDVDGFHPYNVGRLCQ--RAPRLRPCTPRGIVTLLERYNIDTYG 159
The following BLAST results are available for this feature:
BLAST of CB610672 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FOLD_SALPB2.833e-3550.31Bifunctional protein folD OS=Salmonella paratyphi ... [more]
FOLD_SALPA2.833e-3550.31Bifunctional protein folD OS=Salmonella paratyphi ... [more]
FOLD_SALNS2.833e-3550.31Bifunctional protein folD OS=Salmonella newport (s... [more]
FOLD_SALHS2.833e-3550.31Bifunctional protein folD OS=Salmonella heidelberg... [more]
FOLD_SALG22.833e-3550.31Bifunctional protein folD OS=Salmonella gallinarum... [more]
FOLD_SALEP2.833e-3550.31Bifunctional protein folD OS=Salmonella enteritidi... [more]
FOLD_SALDC2.833e-3550.31Bifunctional protein folD OS=Salmonella dublin (st... [more]
FOLD_SALCH2.833e-3550.31Bifunctional protein folD OS=Salmonella choleraesu... [more]
FOLD_SALAR2.833e-3550.31Bifunctional protein folD OS=Salmonella arizonae (... [more]
FOLD_SALA42.833e-3550.31Bifunctional protein folD OS=Salmonella agona (str... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0003_IIIaF_E04 Mature Albedo Citrus sinensis cDNA clone ALBEDO0003_IIIaF_E04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610672 ID=CB610672; Name=CB610672; organism=Citrus sinensis; type=EST; length=531bp
GGGGATCAAATCTCTAGTTCTAGAATAATGGCGGCACCGTCAGATCAGAA
GGCCACCATAATCGACGGCAAAGCCGTCGCTCAGACCATCCGATCTGAAA
TCGCAGAAGAAGTCCGCCTCCTTTCTGAAAAATATGGCAAGGTGCCTGGA
CTGGCAGTAGTAATAGTGGGTGGCAGAAAAGAGGGTCAAAGCTATGTGAG
CATGAAGAGAAAGGCTTGTGCTGAAGTTGGGATTAAGTCTTTTGACATAG
ACCTCCCCGAGCAAGTCTCCGAGGCCGAGCTTATCAGCAAGGTTCACGAG
CTTAACGCAATGCCTGATGTACATGGTATATTGGTTCAACTTCCATTGCC
GAAGCATATAAATGAAGAGAAAGTTTTAGGTGAGATAAGCCTTGAGAAGG
ATGTTGATGGCTTTCATCCTTTGAACATTGGCAAGCTCGCAATGAAAGGC
AGAGACCCCCTCTTCCTTCCTTGCACGCCCAAGGGATGCCTTGAACTTCT
GAAACTAAATGGTGTTACTATAAAGGGTAAA
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