CB610672

Overview
NameCB610672
Unique NameCB610672
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length531
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB610672 vs. ExPASy Swiss-Prot
Match: FOLD_PROMH (Bifunctional protein folD OS=Proteus mirabilis (strain HI4320) GN=folD PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 2.833e-35
Identity = 80/159 (50.31%), Postives = 103/159 (64.78%), Query Frame = 1
Query:   52 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKEGQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKLNGVTIKG 528
            A IIDGK +AQTIRSE+AE+V+   +   + PGLAV++VG     Q YV+ KRKAC EVG  S   DLP+  SEA+L++ +  LN    + GILVQLPLP  I+  KVL  I  +KDVDGFHP NIG+L    R P   PCTP+G + LL+   + + G
Sbjct:    3 ARIIDGKTIAQTIRSEVAEKVKQRIKIGKRAPGLAVILVGDNPASQIYVASKRKACDEVGFISRSYDLPDTTSEADLLNLIDTLNEDNTIDGILVQLPLPAGIDNVKVLERIHPDKDVDGFHPYNIGRLCQ--RAPKLRPCTPRGIVTLLERCNIPMNG 159          
BLAST of CB610672 vs. ExPASy Swiss-Prot
Match: FOLD_CYTH3 (Bifunctional protein folD OS=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) GN=folD PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 2.833e-35
Identity = 73/158 (46.20%), Postives = 106/158 (67.09%), Query Frame = 1
Query:   58 IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKEGQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKLNGVTIKGK 531
            ++DGK  +  I+ E+  +V  +  K GK+P LA V+VG      +YV+ K KAC  VG KS  + LPE ++EA+L++KV E+NA  D+ G +VQLPLPKHI+E+KV   IS +KDVDGFHP ++G++ +    P +LP TP G ++LL+ NG+   GK
Sbjct:    3 LLDGKITSDQIKEELKTKVEAIKAKGGKIPHLAAVLVGDSGAAVTYVNAKVKACELVGFKSTLVKLPETITEADLLAKVAEINADKDIDGYIVQLPLPKHIDEQKVTEAISPDKDVDGFHPTSLGRMVL--NLPTYLPATPYGIMQLLERNGIETSGK 158          
BLAST of CB610672 vs. ExPASy Swiss-Prot
Match: FOLD2_GEOSL (Bifunctional protein folD 2 OS=Geobacter sulfurreducens GN=folD2 PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 2.833e-35
Identity = 79/160 (49.38%), Postives = 109/160 (68.12%), Query Frame = 1
Query:   52 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKEGQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKLNGVTIKGK 531
            ATIIDGKA+A+ IR+++A +V+ L  + G  PGLA V+VG     + YV MK  AC ++G+ S  I  P + +E EL++ ++ELN  P +HGILVQLPLP  IN ++VL  IS  KDVDGFHP N+G+L + G+ P F PCTP G + +L+  GV + GK
Sbjct:    2 ATIIDGKAIAEKIRADLAAQVKELQSR-GITPGLATVLVGSDPASEVYVRMKGDACNKLGMHSVKITRPAETTEEELLALINELNNDPAIHGILVQLPLPPQINADRVLEAISPAKDVDGFHPYNVGRL-VTGK-PTFQPCTPYGVMVMLQEAGVDLAGK 158          
BLAST of CB610672 vs. ExPASy Swiss-Prot
Match: FOLD_VIBSL (Bifunctional protein folD OS=Vibrio splendidus (strain LGP32) GN=folD PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 3.700e-35
Identity = 78/157 (49.68%), Postives = 102/157 (64.97%), Query Frame = 1
Query:   61 IDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKEGQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKLNGVTIKGK 531
            IDGK ++QT+RSE+A  V+  ++   + PGLAVV+VG     Q YV  KRKAC EVG  S   DLP   +E EL++ V +LN  P++ GILVQLPLP  I+  +VL  I+ EKDVDGFHP N+G+LA   R P    CTPKG + LL    + ++GK
Sbjct:    6 IDGKLISQTVRSEVAARVKARTQAGLRAPGLAVVLVGEDPASQVYVGSKRKACEEVGFVSKSYDLPATATEDELLTLVDQLNEDPEIDGILVQLPLPAGIDSTQVLERITPEKDVDGFHPYNVGRLAQ--RMPKLRSCTPKGIITLLDRYNIDLRGK 160          
BLAST of CB610672 vs. ExPASy Swiss-Prot
Match: FOLD_VIBFM (Bifunctional protein folD OS=Vibrio fischeri (strain MJ11) GN=folD PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 3.700e-35
Identity = 77/159 (48.43%), Postives = 101/159 (63.52%), Query Frame = 1
Query:   52 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKEGQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKLNGVTIKG 528
            A IIDGK ++QT+RSE+   V+   E   + PGLAVV+VG     Q YV  KR+AC EVG  S   DLP   SE+EL++ + ELN  P++ GILVQLPLP  ++  K+L  I  EKDVDGFHP N+G+L+   R P    CTPKG + LL    + ++G
Sbjct:    3 AQIIDGKLISQTVRSEVGARVKARVEAGLRAPGLAVVLVGQDPASQVYVGSKRRACEEVGFVSKSYDLPTTTSESELLNLIDELNQDPEIDGILVQLPLPAGMDSTKILEHIDPEKDVDGFHPYNVGRLSQ--RIPKLRSCTPKGIITLLDRYNIQVRG 159          
BLAST of CB610672 vs. ExPASy Swiss-Prot
Match: FOLD_VIBF1 (Bifunctional protein folD OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=folD PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 3.700e-35
Identity = 77/159 (48.43%), Postives = 101/159 (63.52%), Query Frame = 1
Query:   52 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKEGQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKLNGVTIKG 528
            A IIDGK ++QT+RSE+   V+   E   + PGLAVV+VG     Q YV  KR+AC EVG  S   DLP   SE+EL++ + ELN  P++ GILVQLPLP  ++  K+L  I  EKDVDGFHP N+G+L+   R P    CTPKG + LL    + ++G
Sbjct:    3 AQIIDGKLISQTVRSEVGARVKARVEAGLRAPGLAVVLVGQDPASQVYVGSKRRACEEVGFVSKSYDLPTTTSESELLNLIDELNQDPEIDGILVQLPLPAGMDSTKILEHIDPEKDVDGFHPYNVGRLSQ--RIPKLRSCTPKGIITLLDRYNIQVRG 159          
BLAST of CB610672 vs. ExPASy Swiss-Prot
Match: FOLD_SODGM (Bifunctional protein folD OS=Sodalis glossinidius (strain morsitans) GN=folD PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 3.700e-35
Identity = 78/151 (51.66%), Postives = 102/151 (67.55%), Query Frame = 1
Query:   52 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKEGQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLK 504
            A IIDG+AVAQ +RSE+A  ++   +   + PGLAVV+VGG    Q YV+ KRKAC +VG  S   DLP  V+EA L++ + +LNA   V+GILVQLPLP  I+   VL  I+ +KDVDGFHP N+G+L    R PL  PCTP+G + LL+
Sbjct:    3 AKIIDGRAVAQQVRSEVAARIQARLKAGKRAPGLAVVLVGGDPASQIYVASKRKACEDVGFISLSYDLPNTVTEAALLALIDQLNADHRVNGILVQLPLPAGIDNISVLERIAPDKDVDGFHPYNVGRLCQ--RAPLLRPCTPRGIVTLLE 151          
BLAST of CB610672 vs. ExPASy Swiss-Prot
Match: FOLD_NEIG2 (Bifunctional protein folD OS=Neisseria gonorrhoeae (strain NCCP11945) GN=folD PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 3.700e-35
Identity = 80/160 (50.00%), Postives = 103/160 (64.38%), Query Frame = 1
Query:   52 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKEGQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKLNGVTIKGK 531
            A +I+GK V+Q     IAE V    +     P LAVV+VGG   G  YV  K+ AC + GIKS   +LPE  S+ EL++ V  LNA  +V GILVQLPLPKH++ + +L  IS +KDVDGFHP N+G+LA+K   PL  PCTPKG + LL+  G+  KGK
Sbjct:    3 AQLINGKEVSQKHLQAIAEAVAQRQQDNLHTPCLAVVLVGGDPAGAVYVRNKKTACQKCGIKSLSYELPESTSQEELLALVDRLNADSEVDGILVQLPLPKHLDSQAILERISPDKDVDGFHPYNVGRLAVK--MPLMRPCTPKGVMTLLEAYGIDPKGK 160          
BLAST of CB610672 vs. ExPASy Swiss-Prot
Match: FOLD_NEIG1 (Bifunctional protein folD OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) GN=folD PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 3.700e-35
Identity = 80/160 (50.00%), Postives = 103/160 (64.38%), Query Frame = 1
Query:   52 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKEGQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKLNGVTIKGK 531
            A +I+GK V+Q     IAE V    +     P LAVV+VGG   G  YV  K+ AC + GIKS   +LPE  S+ EL++ V  LNA  +V GILVQLPLPKH++ + +L  IS +KDVDGFHP N+G+LA+K   PL  PCTPKG + LL+  G+  KGK
Sbjct:    3 AQLINGKEVSQKHLQAIAEAVAQRQQDNLHTPCLAVVLVGGDPAGAVYVRNKKTACQKCGIKSLSYELPESTSQEELLALVDRLNADSEVDGILVQLPLPKHLDSQAILERISPDKDVDGFHPYNVGRLAVK--MPLMRPCTPKGVMTLLEAYGIDPKGK 160          
BLAST of CB610672 vs. ExPASy Swiss-Prot
Match: FOLD_CITK8 (Bifunctional protein folD OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=folD PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 3.700e-35
Identity = 79/151 (52.32%), Postives = 99/151 (65.56%), Query Frame = 1
Query:   52 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKEGQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLK 504
            A IIDGK +AQ +RSE+A++V+       + PGLAVV+VG     Q YV+ KRKAC EVG  S   DLPE  SEAEL+  +  LNA   + GILVQLPLP  I+  KVL  I+ +KDVDGFHP N+G+L    R P   PCTP+G + LL+
Sbjct:    3 AKIIDGKTIAQQVRSEVAQKVQARVAAGLRAPGLAVVLVGSNPASQIYVASKRKACEEVGFVSRSYDLPETTSEAELLELIDTLNADNTIDGILVQLPLPAGIDNVKVLERIAPDKDVDGFHPYNVGRLCQ--RAPRLRPCTPRGIVTLLE 151          
The following BLAST results are available for this feature:
BLAST of CB610672 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FOLD_PROMH2.833e-3550.31Bifunctional protein folD OS=Proteus mirabilis (st... [more]
FOLD_CYTH32.833e-3546.20Bifunctional protein folD OS=Cytophaga hutchinsoni... [more]
FOLD2_GEOSL2.833e-3549.38Bifunctional protein folD 2 OS=Geobacter sulfurred... [more]
FOLD_VIBSL3.700e-3549.68Bifunctional protein folD OS=Vibrio splendidus (st... [more]
FOLD_VIBFM3.700e-3548.43Bifunctional protein folD OS=Vibrio fischeri (stra... [more]
FOLD_VIBF13.700e-3548.43Bifunctional protein folD OS=Vibrio fischeri (stra... [more]
FOLD_SODGM3.700e-3551.66Bifunctional protein folD OS=Sodalis glossinidius ... [more]
FOLD_NEIG23.700e-3550.00Bifunctional protein folD OS=Neisseria gonorrhoeae... [more]
FOLD_NEIG13.700e-3550.00Bifunctional protein folD OS=Neisseria gonorrhoeae... [more]
FOLD_CITK83.700e-3552.32Bifunctional protein folD OS=Citrobacter koseri (s... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0003_IIIaF_E04 Mature Albedo Citrus sinensis cDNA clone ALBEDO0003_IIIaF_E04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610672 ID=CB610672; Name=CB610672; organism=Citrus sinensis; type=EST; length=531bp
GGGGATCAAATCTCTAGTTCTAGAATAATGGCGGCACCGTCAGATCAGAA
GGCCACCATAATCGACGGCAAAGCCGTCGCTCAGACCATCCGATCTGAAA
TCGCAGAAGAAGTCCGCCTCCTTTCTGAAAAATATGGCAAGGTGCCTGGA
CTGGCAGTAGTAATAGTGGGTGGCAGAAAAGAGGGTCAAAGCTATGTGAG
CATGAAGAGAAAGGCTTGTGCTGAAGTTGGGATTAAGTCTTTTGACATAG
ACCTCCCCGAGCAAGTCTCCGAGGCCGAGCTTATCAGCAAGGTTCACGAG
CTTAACGCAATGCCTGATGTACATGGTATATTGGTTCAACTTCCATTGCC
GAAGCATATAAATGAAGAGAAAGTTTTAGGTGAGATAAGCCTTGAGAAGG
ATGTTGATGGCTTTCATCCTTTGAACATTGGCAAGCTCGCAATGAAAGGC
AGAGACCCCCTCTTCCTTCCTTGCACGCCCAAGGGATGCCTTGAACTTCT
GAAACTAAATGGTGTTACTATAAAGGGTAAA
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