CB610673

Overview
NameCB610673
Unique NameCB610673
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length636
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB610673 vs. ExPASy Swiss-Prot
Match: HS17A_ARATH (17.6 kDa class I heat shock protein 1 OS=Arabidopsis thaliana GN=HSP17.6A PE=1 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.392e-37
Identity = 46/71 (64.79%), Postives = 54/71 (76.06%), Query Frame = 1
Query:  250 KADLPGLXXXXXXXXXXXXXXLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESG 462
            KADLPG+              L+ISG+R +EKE+K DTWHRVERSSG FSR+FRLPENVKMDQ+KASME+G
Sbjct:   60 KADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGGFSRKFRLPENVKMDQVKASMENG 130          

HSP 2 Score: 79.7221 bits (195), Expect = 1.392e-37
Identity = 41/69 (59.42%), Postives = 47/69 (68.12%), Query Frame = 2
Query:   50 MSLIPSFFGNRR---SSVSDPFSLDVWDPFRDFPFPSGYSSALSSQFPPETSAVVNARVDWKETPEAHV 247
            MSLIPSFFGN R   +++ DPFSLDVWDPF++  FPS  S           SA+ NARVDWKET EAHV
Sbjct:    1 MSLIPSFFGNNRRINNNIFDPFSLDVWDPFKELQFPSSSS-----------SAIANARVDWKETAEAHV 58          
BLAST of CB610673 vs. ExPASy Swiss-Prot
Match: HSP12_DAUCA (18.0 kDa class I heat shock protein OS=Daucus carota PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 1.813e-37
Identity = 41/66 (62.12%), Postives = 53/66 (80.30%), Query Frame = 2
Query:   50 MSLIPSFFGNRRSSVSDPFSLDVWDPFRDFPFPSGYSSALSSQFPPETSAVVNARVDWKETPEAHV 247
            MS+IPSFFG+RRS+V +PFSLD+WDPF+D+P  +  SS  SS+F  ET+A  N  +DWKETP+AHV
Sbjct:    1 MSIIPSFFGSRRSNVLNPFSLDIWDPFQDYPLIT--SSGTSSEFGKETAAFANTHIDWKETPQAHV 64          

HSP 2 Score: 84.3445 bits (207), Expect = 1.813e-37
Identity = 45/94 (47.87%), Postives = 53/94 (56.38%), Query Frame = 1
Query:  250 KADLPGLXXXXXXXXXXXXXXLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESGXXXXXXXXXXXXXXXXXAIEISG 531
            KADLPGL              LQISG+R  EKE+KN+ WHRVE SSG F RRFRLPEN  +D++KA ME+G                 +I ISG
Sbjct:   66 KADLPGLKKEEVKVEVEEGKVLQISGERNKEKEEKNNKWHRVEFSSGKFLRRFRLPENANVDEVKAGMENGVLTVTVPKVEMKKPEVKSIHISG 159          
BLAST of CB610673 vs. ExPASy Swiss-Prot
Match: HSP11_SOLPE (17.7 kDa class I heat shock protein OS=Solanum peruvianum PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 5.227e-37
Identity = 52/94 (55.32%), Postives = 57/94 (60.64%), Query Frame = 1
Query:  250 KADLPGLXXXXXXXXXXXXXXLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESGXXXXXXXXXXXXXXXXXAIEISG 531
            KADLPGL              LQISG+R +EKEDKND W RVERSSG F RRFRLPEN KMDQ+KASME+G                 +IEISG
Sbjct:   61 KADLPGLKLEEVKVEVEEDRVLQISGERNMEKEDKNDKWQRVERSSGKFMRRFRLPENAKMDQVKASMENGVLTVTVPKEEMKKPDVKSIEISG 154          

HSP 2 Score: 76.2554 bits (186), Expect = 5.227e-37
Identity = 40/67 (59.70%), Postives = 46/67 (68.66%), Query Frame = 2
Query:   50 MSLIPSFFGNRRSS-VSDPFSLDVWDPFRDFPFPSGYSSALSSQFPPETSAVVNARVDWKETPEAHV 247
            MSLIP  FG+RRSS + DPFS+DV+DPFR+  FP   S         ETSA  N R+DWKETPEAHV
Sbjct:    1 MSLIPRIFGDRRSSSMFDPFSIDVFDPFRELGFPGTNSG--------ETSAFANTRIDWKETPEAHV 59          
BLAST of CB610673 vs. ExPASy Swiss-Prot
Match: HSP11_SOLLC (17.8 kDa class I heat shock protein OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 8.870e-37
Identity = 51/94 (54.26%), Postives = 57/94 (60.64%), Query Frame = 1
Query:  250 KADLPGLXXXXXXXXXXXXXXLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESGXXXXXXXXXXXXXXXXXAIEISG 531
            K DLPGL              LQISG+R +EKEDKND WHR+ERSSG F RRFRLPEN KMDQ+KASME+G                 +IEISG
Sbjct:   61 KVDLPGLKKEEVKVEVEEDRVLQISGERNVEKEDKNDKWHRMERSSGKFMRRFRLPENAKMDQVKASMENGVLTVTVPKEEVKKPEVKSIEISG 154          

HSP 2 Score: 74.3294 bits (181), Expect = 8.870e-37
Identity = 39/67 (58.21%), Postives = 46/67 (68.66%), Query Frame = 2
Query:   50 MSLIPSFFGNRRSS-VSDPFSLDVWDPFRDFPFPSGYSSALSSQFPPETSAVVNARVDWKETPEAHV 247
            MSLIP  FG+RRSS + DPFS+DV+DPFR+  FPS  S         E+SA  N R+DWKETPE HV
Sbjct:    1 MSLIPRIFGDRRSSSMFDPFSIDVFDPFRELGFPSTNSG--------ESSAFANTRIDWKETPEPHV 59          
BLAST of CB610673 vs. ExPASy Swiss-Prot
Match: HS17C_ARATH (17.6 kDa class I heat shock protein 3 OS=Arabidopsis thaliana GN=HSP17.6C PE=2 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 1.505e-36
Identity = 49/94 (52.13%), Postives = 57/94 (60.64%), Query Frame = 1
Query:  250 KADLPGLXXXXXXXXXXXXXXLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESGXXXXXXXXXXXXXXXXXAIEISG 531
            KADLPGL              LQISG+R  E E+KND WHRVERSSG F+RRFRLPEN KM++IKASME+G                 +I+ISG
Sbjct:   64 KADLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERSSGKFTRRFRLPENAKMEEIKASMENGVLSVTVPKVPEKKPEVKSIDISG 157          

HSP 2 Score: 79.337 bits (194), Expect = 1.505e-36
Identity = 39/66 (59.09%), Postives = 49/66 (74.24%), Query Frame = 2
Query:   50 MSLIPSFFGNRRSSVSDPFSLDVWDPFRDFPFPSGYSSALSSQFPPETSAVVNARVDWKETPEAHV 247
            MSLIPS FG RR++V DPFSLDV+DPF  F  PSG ++A +     + +A  NA+VDW+ETPEAHV
Sbjct:    1 MSLIPSIFGGRRTNVFDPFSLDVFDPFEGFLTPSGLANAPAM----DVAAFTNAKVDWRETPEAHV 62          
BLAST of CB610673 vs. ExPASy Swiss-Prot
Match: HS181_ARATH (18.1 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP18.1 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 7.347e-36
Identity = 46/94 (48.94%), Postives = 56/94 (59.57%), Query Frame = 1
Query:  250 KADLPGLXXXXXXXXXXXXXXLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESGXXXXXXXXXXXXXXXXXAIEISG 531
            KADLPGL              LQISG+R  E E+KND WHRVER+SG F RRFRLPEN KM+++KA+ME+G                 +I+ISG
Sbjct:   66 KADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKNDKWHRVERASGKFMRRFRLPENAKMEEVKATMENGVLTVVVPKAPEKKPQVKSIDISG 159          

HSP 2 Score: 80.4925 bits (197), Expect = 7.347e-36
Identity = 40/66 (60.61%), Postives = 47/66 (71.21%), Query Frame = 2
Query:   50 MSLIPSFFGNRRSSVSDPFSLDVWDPFRDFPFPSGYSSALSSQFPPETSAVVNARVDWKETPEAHV 247
            MSLIPS FG RRS+V DPFS D+WDPF  F  PS  S+  ++    + +A  NARVDWKETPEAHV
Sbjct:    1 MSLIPSIFGGRRSNVFDPFSQDLWDPFEGFFTPS--SALANASTARDVAAFTNARVDWKETPEAHV 64          
BLAST of CB610673 vs. ExPASy Swiss-Prot
Match: HSP17_ARATH (17.4 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP17.4A PE=1 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 1.248e-35
Identity = 45/94 (47.87%), Postives = 57/94 (60.64%), Query Frame = 1
Query:  250 KADLPGLXXXXXXXXXXXXXXLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESGXXXXXXXXXXXXXXXXXAIEISG 531
            KAD+PGL              LQISG+R  E E+K+DTWHRVERSSG F RRFRLPEN K++++KASME+G                 +++ISG
Sbjct:   63 KADVPGLKKEEVKVEVEDGNILQISGERSSENEEKSDTWHRVERSSGKFMRRFRLPENAKVEEVKASMENGVLSVTVPKVQESKPEVKSVDISG 156          

HSP 2 Score: 79.7221 bits (195), Expect = 1.248e-35
Identity = 38/66 (57.58%), Postives = 47/66 (71.21%), Query Frame = 2
Query:   50 MSLIPSFFGNRRSSVSDPFSLDVWDPFRDFPFPSGYSSALSSQFPPETSAVVNARVDWKETPEAHV 247
            MSL+PSFFG RR++V DPFSLDVWDPF  F  P      L++    + +A  NA+VDW+ETPEAHV
Sbjct:    1 MSLVPSFFGGRRTNVFDPFSLDVWDPFEGFLTP-----GLTNAPAKDVAAFTNAKVDWRETPEAHV 61          
BLAST of CB610673 vs. ExPASy Swiss-Prot
Match: HSP11_HELAN (17.6 kDa class I heat shock protein OS=Helianthus annuus GN=HSP17.6 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.626e-35
Identity = 44/77 (57.14%), Postives = 54/77 (70.13%), Query Frame = 1
Query:  232 PGSPRVKADLPGLXXXXXXXXXXXXXXLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESG 462
            P +  +KADLPG+              LQISG+R  E+E+K+DTWHRVERSSG F RRFRLPEN KMD++KA ME+G
Sbjct:   53 PEAHVLKADLPGMKKEEVKVEVEDGRVLQISGERCREQEEKDDTWHRVERSSGKFIRRFRLPENAKMDEVKAMMENG 129          

HSP 2 Score: 79.7221 bits (195), Expect = 1.626e-35
Identity = 37/66 (56.06%), Postives = 49/66 (74.24%), Query Frame = 2
Query:   50 MSLIPSFFGNRRSSVSDPFSLDVWDPFRDFPFPSGYSSALSSQFPPETSAVVNARVDWKETPEAHV 247
            MS+IPSFF ++RS++ DPFSLD WDPF+           +S++   ET+A+VNAR+DWKETPEAHV
Sbjct:    1 MSIIPSFFTSKRSNIFDPFSLDTWDPFQ---------GIISTEPARETAAIVNARIDWKETPEAHV 57          
BLAST of CB610673 vs. ExPASy Swiss-Prot
Match: HSP11_CHERU (18.3 kDa class I heat shock protein OS=Chenopodium rubrum GN=HSP18 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 3.874e-34
Identity = 44/71 (61.97%), Postives = 51/71 (71.83%), Query Frame = 1
Query:  250 KADLPGLXXXXXXXXXXXXXXLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESG 462
            KADLPG+              L+ISGQR  EKE+KNDTWHRVERSSG F R+FRLPEN K+DQ+KA ME+G
Sbjct:   69 KADLPGVKKEEVKVEVEDGNVLRISGQRAREKEEKNDTWHRVERSSGQFMRKFRLPENAKVDQVKAGMENG 139          

HSP 2 Score: 72.7886 bits (177), Expect = 3.874e-34
Identity = 40/69 (57.97%), Postives = 49/69 (71.01%), Query Frame = 2
Query:   50 MSLIPSFFGN--RRSSVSDPFSLD-VWDPFRDFPFPSGYSSALSSQFPPETSAVVNARVDWKETPEAHV 247
            MSLIP+ + N  RRS++ DPFSLD +WDPF  F  PS  S+   S+   ET+A  NAR+DWKETPEAHV
Sbjct:    1 MSLIPNNWFNTGRRSNIFDPFSLDEIWDPF--FGLPSTLSTVPRSETAAETAAFANARIDWKETPEAHV 67          
BLAST of CB610673 vs. ExPASy Swiss-Prot
Match: HS17A_ORYSJ (17.9 kDa class I heat shock protein OS=Oryza sativa subsp. japonica GN=HSP17.9A PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 7.089e-33
Identity = 46/94 (48.94%), Postives = 55/94 (58.51%), Query Frame = 1
Query:  250 KADLPGLXXXXXXXXXXXXXXLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESGXXXXXXXXXXXXXXXXXAIEISG 531
            KAD+PGL              LQISG+R  E+E+K D WHRVERSSG F RRFRLP+N K +QIKASME+G                 +I+ISG
Sbjct:   68 KADVPGLKKEEVKVEVDDGNILQISGERNKEQEEKTDQWHRVERSSGKFLRRFRLPDNAKPEQIKASMENGVLTVTVPKEEAKKPDVKSIQISG 161          

HSP 2 Score: 73.9442 bits (180), Expect = 7.089e-33
Identity = 39/63 (61.90%), Postives = 44/63 (69.84%), Query Frame = 2
Query:   80 RRSSVSDPFSLDVWDPFRDFPFPSGYSSALSSQFP-------PETSAVVNARVDWKETPEAHV 247
            RRS+V DPFSLD+WDPF  FPF SG SS+  S FP        ET+A   AR+DWKETPEAHV
Sbjct:    5 RRSNVFDPFSLDLWDPFDGFPFGSGGSSS-GSIFPSFPRGASSETAAFAGARIDWKETPEAHV 66          
The following BLAST results are available for this feature:
BLAST of CB610673 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
HS17A_ARATH1.392e-3764.7917.6 kDa class I heat shock protein 1 OS=Arabidops... [more]
HSP12_DAUCA1.813e-3762.1218.0 kDa class I heat shock protein OS=Daucus caro... [more]
HSP11_SOLPE5.227e-3755.3217.7 kDa class I heat shock protein OS=Solanum per... [more]
HSP11_SOLLC8.870e-3754.2617.8 kDa class I heat shock protein OS=Solanum lyc... [more]
HS17C_ARATH1.505e-3652.1317.6 kDa class I heat shock protein 3 OS=Arabidops... [more]
HS181_ARATH7.347e-3648.9418.1 kDa class I heat shock protein OS=Arabidopsis... [more]
HSP17_ARATH1.248e-3547.8717.4 kDa class I heat shock protein OS=Arabidopsis... [more]
HSP11_HELAN1.626e-3557.1417.6 kDa class I heat shock protein OS=Helianthus ... [more]
HSP11_CHERU3.874e-3461.9718.3 kDa class I heat shock protein OS=Chenopodium... [more]
HS17A_ORYSJ7.089e-3348.9417.9 kDa class I heat shock protein OS=Oryza sativ... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0003_IIIaF_E05 Mature Albedo Citrus sinensis cDNA clone ALBEDO0003_IIIaF_E05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610673 ID=CB610673; Name=CB610673; organism=Citrus sinensis; type=EST; length=636bp
GGGGATCAGCAGCAAAATACCGAAAGCCGTATCACTCTATTGAGAAACGA
TGTCGTTGATTCCAAGCTTCTTCGGAAACCGACGCAGCAGTGTCTCTGAT
CCATTTTCACTCGACGTTTGGGATCCATTCAGGGACTTCCCTTTCCCTTC
CGGTTATTCGTCTGCGCTGTCCTCTCAGTTCCCTCCAGAAACCTCTGCTG
TCGTTAATGCCCGCGTGGACTGGAAGGAAACCCCGGAAGCCCACGTGTCA
AGGCCGATCTTCCGGGGCTCCGGAAAGAGGAAGTGAAGGTCGAGGTCGAA
GACGACAGGGTGCTTCAGATAAGCGGTCAGAGGAAGATTGAGAAGGAAGA
CAAGAACGACACGTGGCATCGCGTTGAGCGCAGCAGTGGCATGTTCTCAA
GGAGGTTCAGGTTACCTGAGAATGTGAAGATGGATCAGATTAAGGCTTCC
ATGGAGAGTGGTGTGCTCACTGTTACTGTTCCGAAAGTGGAGGTGACCAA
ACCTGATGTTAAGGCTATCGAAATCTCTGGTTAAACCAGTGTCTGTCTGT
ATGTCTTTATGCATACTTGTATAAGGATGCTGTGATGTTTTGGTTTTGTA
ATTTGCTTGCATGAATGTTTGTGTAATGGGATTCTG
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