CB610673

Overview
NameCB610673
Unique NameCB610673
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length636
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB610673 vs. ExPASy Swiss-Prot
Match: HS16B_ORYSJ (16.9 kDa class I heat shock protein 2 OS=Oryza sativa subsp. japonica GN=HSP16.9B PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.205e-32
Identity = 53/100 (53.00%), Postives = 57/100 (57.00%), Query Frame = 1
Query:  232 PGSPRVKADLPGLXXXXXXXXXXXXXXLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESGXXXXXXXXXXXXXXXXXAIEISG 531
            P S   KADLPG+              L ISGQR  EKEDKND WHRVERSSG F RRFRLPEN K+DQ+KA ME+G                 AIEISG
Sbjct:   51 PESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVDQVKAGMENGVLTVTVPKAEVKKPEVKAIEISG 150          

HSP 2 Score: 63.1586 bits (152), Expect = 1.205e-32
Identity = 30/56 (53.57%), Postives = 39/56 (69.64%), Query Frame = 2
Query:   80 RRSSVSDPFSLDVWDPFRDFPFPSGYSSALSSQFPPETSAVVNARVDWKETPEAHV 247
            RRS+V DPFSLD+WDPF      S + S + +    +T+A  NAR+DWKETPE+HV
Sbjct:    5 RRSNVFDPFSLDLWDPF-----DSVFRSVVPATSDNDTAAFANARIDWKETPESHV 55          
BLAST of CB610673 vs. ExPASy Swiss-Prot
Match: HS181_ORYSJ (18.1 kDa class I heat shock protein OS=Oryza sativa subsp. japonica GN=HSP18.1 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.040e-32
Identity = 43/71 (60.56%), Postives = 49/71 (69.01%), Query Frame = 1
Query:  250 KADLPGLXXXXXXXXXXXXXXLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESG 462
            KAD+PGL              LQISG+R  E+E+K D WHRVERSSG F RRFRLPEN K +QIKASME+G
Sbjct:   68 KADVPGLKKEEVKVEVEDGNVLQISGERSKEQEEKTDKWHRVERSSGKFLRRFRLPENTKPEQIKASMENG 138          

HSP 2 Score: 72.7886 bits (177), Expect = 2.040e-32
Identity = 37/62 (59.68%), Postives = 43/62 (69.35%), Query Frame = 2
Query:   80 RRSSVSDPFSLDVWDPFRDFPFPSG--YSSALSSQFP----PETSAVVNARVDWKETPEAHV 247
            RRS+V DPFSLD+WDPF  FPF SG   S ++   FP     ET+A   AR+DWKETPEAHV
Sbjct:    5 RRSNVFDPFSLDLWDPFDGFPFGSGSRSSGSIFPSFPRGTSSETAAFAGARIDWKETPEAHV 66          
BLAST of CB610673 vs. ExPASy Swiss-Prot
Match: HS16A_ORYSJ (16.9 kDa class I heat shock protein 1 OS=Oryza sativa subsp. japonica GN=HSP16.9A PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 2.661e-32
Identity = 52/100 (52.00%), Postives = 57/100 (57.00%), Query Frame = 1
Query:  232 PGSPRVKADLPGLXXXXXXXXXXXXXXLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESGXXXXXXXXXXXXXXXXXAIEISG 531
            P S   KADLPG+              L ISGQR  EKEDKND WHRVERSSG F RRFRLPEN K+DQ+KA +E+G                 AIEISG
Sbjct:   51 PESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVDQVKAGLENGVLTVTVPKAEVKKPEVKAIEISG 150          

HSP 2 Score: 63.1586 bits (152), Expect = 2.661e-32
Identity = 30/56 (53.57%), Postives = 39/56 (69.64%), Query Frame = 2
Query:   80 RRSSVSDPFSLDVWDPFRDFPFPSGYSSALSSQFPPETSAVVNARVDWKETPEAHV 247
            RRS+V DPFSLD+WDPF      S + S + +    +T+A  NAR+DWKETPE+HV
Sbjct:    5 RRSNVFDPFSLDLWDPF-----DSVFRSVVPATSDNDTAAFANARIDWKETPESHV 55          
BLAST of CB610673 vs. ExPASy Swiss-Prot
Match: HS174_ORYSJ (17.4 kDa class I heat shock protein OS=Oryza sativa subsp. japonica GN=HSP17.4 PE=2 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 9.966e-32
Identity = 46/94 (48.94%), Postives = 55/94 (58.51%), Query Frame = 1
Query:  250 KADLPGLXXXXXXXXXXXXXXLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESGXXXXXXXXXXXXXXXXXAIEISG 531
            KAD+PGL              LQISG+R  E+E+K D WHRVERSSG F RRFRLPEN K +QIKASME+G                 +I+I+G
Sbjct:   61 KADVPGLKKEEVKVEVEDGNVLQISGERIKEQEEKTDKWHRVERSSGKFLRRFRLPENTKPEQIKASMENGVLTVTVPKEEPKKPDVKSIQITG 154          

HSP 2 Score: 71.2478 bits (173), Expect = 9.966e-32
Identity = 34/56 (60.71%), Postives = 41/56 (73.21%), Query Frame = 2
Query:   80 RRSSVSDPFSLDVWDPFRDFPFPSGYSSALSSQFPPETSAVVNARVDWKETPEAHV 247
            RRS+V DPFSLD+WDPF  FPF SG S +L  +   + +A   AR+DWKETPEAHV
Sbjct:    5 RRSNVFDPFSLDLWDPFDGFPFGSG-SGSLFPRANSDAAAFAGARIDWKETPEAHV 59          
BLAST of CB610673 vs. ExPASy Swiss-Prot
Match: HS177_ORYSJ (17.7 kDa class I heat shock protein OS=Oryza sativa subsp. japonica GN=HSP17.7 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 4.856e-31
Identity = 47/94 (50.00%), Postives = 56/94 (59.57%), Query Frame = 1
Query:  250 KADLPGLXXXXXXXXXXXXXXLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESGXXXXXXXXXXXXXXXXXAIEISG 531
            KAD+PGL              LQISG+R  E+E+K+D WHRVERSSG F RRFRLPEN K +QIKASME+G                 +I+ISG
Sbjct:   66 KADVPGLKKEEVKVEVDDGNILQISGERSREQEEKSDKWHRVERSSGKFLRRFRLPENTKPEQIKASMENGVLTVTVPKEEPKKPDVKSIQISG 159          

HSP 2 Score: 66.2402 bits (160), Expect = 4.856e-31
Identity = 34/60 (56.67%), Postives = 40/60 (66.67%), Query Frame = 2
Query:   80 RRSSVSDPFSLDVWDPFRDFPFPSGYSSALS-SQFP---PETSAVVNARVDWKETPEAHV 247
            RR +  DPFSLD+WDP   FPF SG SS+ S S FP    + +A   AR+DWKETPE HV
Sbjct:    5 RRGNAFDPFSLDLWDPVDGFPFGSGGSSSSSGSLFPRANSDAAAFAGARIDWKETPEVHV 64          
BLAST of CB610673 vs. ExPASy Swiss-Prot
Match: HS16C_ORYSJ (16.9 kDa class I heat shock protein 3 OS=Oryza sativa subsp. japonica GN=HSP16.9C PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 3.088e-30
Identity = 54/100 (54.00%), Postives = 58/100 (58.00%), Query Frame = 1
Query:  232 PGSPRVKADLPGLXXXXXXXXXXXXXXLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESGXXXXXXXXXXXXXXXXXAIEISG 531
            P S   KADLPG+              L ISGQR  EKEDKND WHRVERSSG F RRFRLPEN K+DQ+KASME+G                 AIEISG
Sbjct:   50 PESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVDQVKASMENGVLTVTVPKAEVKKPEVKAIEISG 149          

HSP 2 Score: 53.5286 bits (127), Expect = 3.088e-30
Identity = 28/56 (50.00%), Postives = 36/56 (64.29%), Query Frame = 2
Query:   80 RRSSVSDPFSLDVWDPFRDFPFPSGYSSALSSQFPPETSAVVNARVDWKETPEAHV 247
            RRS+V DPF+ D WDPF        + S + +    +T+A  NARVDWKETPE+HV
Sbjct:    5 RRSNVFDPFA-DFWDPFDGV-----FRSLVPATSDRDTAAFANARVDWKETPESHV 54          
BLAST of CB610673 vs. ExPASy Swiss-Prot
Match: HS16A_WHEAT (16.9 kDa class I heat shock protein 1 OS=Triticum aestivum GN=hsp16.9A PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 8.469e-27
Identity = 44/94 (46.81%), Postives = 54/94 (57.45%), Query Frame = 1
Query:  250 KADLPGLXXXXXXXXXXXXXXLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESGXXXXXXXXXXXXXXXXXAIEISG 531
            K DLPG+              L +SG+R  EKEDKND WHRVERSSG F RRFRLPE+ K++++KA +E+G                 AIEISG
Sbjct:   58 KVDLPGVKKEEVKVEVEDGNVLVVSGERSREKEDKNDKWHRVERSSGKFVRRFRLPEDAKVEEVKAGLENGVLTVTVPKAEVKKPEVKAIEISG 151          

HSP 2 Score: 54.299 bits (129), Expect = 8.469e-27
Identity = 35/61 (57.38%), Postives = 39/61 (63.93%), Query Frame = 2
Query:   80 RRSSVSDPFSLDVW-DPFRDF----PFPSGYSSALSSQFPPETSAVVNARVDWKETPEAHV 247
            RRS+V DPF+ D+W DPF  F    P  SG SS        ET+A  NARVDWKETPEAHV
Sbjct:    5 RRSNVFDPFA-DLWADPFDTFRSIVPAISGGSS--------ETAAFANARVDWKETPEAHV 56          
BLAST of CB610673 vs. ExPASy Swiss-Prot
Match: HS16B_WHEAT (16.9 kDa class I heat shock protein 2 OS=Triticum aestivum GN=hsp16.9B PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.651e-24
Identity = 43/94 (45.74%), Postives = 54/94 (57.45%), Query Frame = 1
Query:  250 KADLPGLXXXXXXXXXXXXXXLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESGXXXXXXXXXXXXXXXXXAIEISG 531
            KADLPG+              L +SG+R  EKEDKND WHRVERSSG F RRFRL E+ K++++KA +E+G                 AI+ISG
Sbjct:   58 KADLPGVKKEEVKVEVEDGNVLVVSGERTKEKEDKNDKWHRVERSSGKFVRRFRLLEDAKVEEVKAGLENGVLTVTVPKAEVKKPEVKAIQISG 151          

HSP 2 Score: 50.447 bits (119), Expect = 1.651e-24
Identity = 32/61 (52.46%), Postives = 38/61 (62.30%), Query Frame = 2
Query:   80 RRSSVSDPFSLDVW-DPFRDF----PFPSGYSSALSSQFPPETSAVVNARVDWKETPEAHV 247
            RR++V DPF+ D+W DPF  F    P  SG  S        ET+A  NAR+DWKETPEAHV
Sbjct:    5 RRTNVFDPFA-DLWADPFDTFRSIVPAISGGGS--------ETAAFANARMDWKETPEAHV 56          
BLAST of CB610673 vs. ExPASy Swiss-Prot
Match: HSP14_SOYBN (17.5 kDa class I heat shock protein OS=Glycine max GN=HSP17.5-E PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 3.382e-21
Identity = 58/129 (44.96%), Postives = 71/129 (55.04%), Query Frame = 1
Query:  145 PFRLFVCAVLSVPSRNLCCR*CPRGLEGNPGSPRVKADLPGLXXXXXXXXXXXXXXLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESGXXXXXXXXXXXXXXXXXAIEISG 531
            PF+ F     SV + N          +  P +   KAD+PGL              LQISG+R +EKEDKNDTWHRVERSSG F+RRFRLPEN K++++KASME+G                 AIEISG
Sbjct:   26 PFKDFHVPTSSVSAENSAFVSTRVDWKETPEAHVFKADIPGLKKEEVKVQIEDDRVLQISGERNVEKEDKNDTWHRVERSSGKFTRRFRLPENAKVNEVKASMENGVLTVTVPKEEVKKPDVKAIEISG 154          

HSP 2 Score: 87.0409 bits (214), Expect = 8.534e-17
Identity = 43/66 (65.15%), Postives = 48/66 (72.73%), Query Frame = 2
Query:   50 MSLIPSFFGNRRSSVSDPFSLDVWDPFRDFPFPSGYSSALSSQFPPETSAVVNARVDWKETPEAHV 247
            MSLIP FFG RRS+V DPFSLD+WDPF+DF  P+   SA       E SA V+ RVDWKETPEAHV
Sbjct:    1 MSLIPGFFGGRRSNVFDPFSLDMWDPFKDFHVPTSSVSA-------ENSAFVSTRVDWKETPEAHV 59          
BLAST of CB610673 vs. ExPASy Swiss-Prot
Match: HSP11_MEDSA (18.1 kDa class I heat shock protein (Fragment) OS=Medicago sativa GN=HSP18.1 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 7.534e-21
Identity = 58/129 (44.96%), Postives = 67/129 (51.94%), Query Frame = 1
Query:  142 FPFRLFVCAVLSVPSRNLCCR*CPRGLEGNPGSPRVKADLPGLXXXXXXXXXXXXXXLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESGXXXXXXXXXXXXXXXXXAIEIS 528
            FPF     +  S P  N          +  P +   KADLPGL              LQISG+R +EKEDKND WHRVERSSG F RRFRLPEN KMDQ+KA+ME+G                 +IEIS
Sbjct:   14 FPFTNSALSASSFPQENSAFVSTRIDWKETPEAHVFKADLPGLKKEEVKVEIEDDRVLQISGERNVEKEDKNDQWHRVERSSGKFMRRFRLPENAKMDQVKAAMENGVLTVTVPKEEIKKPEVKSIEIS 142          

HSP 2 Score: 76.2554 bits (186), Expect = 1.506e-13
Identity = 35/50 (70.00%), Postives = 39/50 (78.00%), Query Frame = 2
Query:   98 DPFSLDVWDPFRDFPFPSGYSSALSSQFPPETSAVVNARVDWKETPEAHV 247
            DPFSLDVWDPF+DFPF +   SA  S FP E SA V+ R+DWKETPEAHV
Sbjct:    1 DPFSLDVWDPFKDFPFTNSALSA--SSFPQENSAFVSTRIDWKETPEAHV 48          
The following BLAST results are available for this feature:
BLAST of CB610673 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
HS16B_ORYSJ1.205e-3253.0016.9 kDa class I heat shock protein 2 OS=Oryza sat... [more]
HS181_ORYSJ2.040e-3260.5618.1 kDa class I heat shock protein OS=Oryza sativ... [more]
HS16A_ORYSJ2.661e-3252.0016.9 kDa class I heat shock protein 1 OS=Oryza sat... [more]
HS174_ORYSJ9.966e-3248.9417.4 kDa class I heat shock protein OS=Oryza sativ... [more]
HS177_ORYSJ4.856e-3150.0017.7 kDa class I heat shock protein OS=Oryza sativ... [more]
HS16C_ORYSJ3.088e-3054.0016.9 kDa class I heat shock protein 3 OS=Oryza sat... [more]
HS16A_WHEAT8.469e-2746.8116.9 kDa class I heat shock protein 1 OS=Triticum ... [more]
HS16B_WHEAT1.651e-2445.7416.9 kDa class I heat shock protein 2 OS=Triticum ... [more]
HSP14_SOYBN3.382e-2144.9617.5 kDa class I heat shock protein OS=Glycine max... [more]
HSP11_MEDSA7.534e-2144.9618.1 kDa class I heat shock protein (Fragment) OS=... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0003_IIIaF_E05 Mature Albedo Citrus sinensis cDNA clone ALBEDO0003_IIIaF_E05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610673 ID=CB610673; Name=CB610673; organism=Citrus sinensis; type=EST; length=636bp
GGGGATCAGCAGCAAAATACCGAAAGCCGTATCACTCTATTGAGAAACGA
TGTCGTTGATTCCAAGCTTCTTCGGAAACCGACGCAGCAGTGTCTCTGAT
CCATTTTCACTCGACGTTTGGGATCCATTCAGGGACTTCCCTTTCCCTTC
CGGTTATTCGTCTGCGCTGTCCTCTCAGTTCCCTCCAGAAACCTCTGCTG
TCGTTAATGCCCGCGTGGACTGGAAGGAAACCCCGGAAGCCCACGTGTCA
AGGCCGATCTTCCGGGGCTCCGGAAAGAGGAAGTGAAGGTCGAGGTCGAA
GACGACAGGGTGCTTCAGATAAGCGGTCAGAGGAAGATTGAGAAGGAAGA
CAAGAACGACACGTGGCATCGCGTTGAGCGCAGCAGTGGCATGTTCTCAA
GGAGGTTCAGGTTACCTGAGAATGTGAAGATGGATCAGATTAAGGCTTCC
ATGGAGAGTGGTGTGCTCACTGTTACTGTTCCGAAAGTGGAGGTGACCAA
ACCTGATGTTAAGGCTATCGAAATCTCTGGTTAAACCAGTGTCTGTCTGT
ATGTCTTTATGCATACTTGTATAAGGATGCTGTGATGTTTTGGTTTTGTA
ATTTGCTTGCATGAATGTTTGTGTAATGGGATTCTG
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