CB610684

Overview
NameCB610684
Unique NameCB610684
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length698
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB610684 vs. ExPASy Swiss-Prot
Match: CYT7_ARATH (Cysteine proteinase inhibitor 7 OS=Arabidopsis thaliana GN=CYS7 PE=2 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 5.605e-15
Identity = 40/93 (43.01%), Postives = 58/93 (62.37%), Query Frame = 3
Query:   81 LGGVRNVEATANN-QEIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXXGTLYGITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNPVAQS 356
            LGG  + +   N  +EI ++A FAV EHN+++N+ L+             G LY +TLE +E G+KK++EAKVW KPWM FK+L+EF  +  S
Sbjct:   45 LGGFSDSKNDWNGGKEIDDIALFAVQEHNRRENAVLELARVLKATEQVVAGKLYRLTLEVIEAGEKKIYEAKVWVKPWMNFKQLQEFKNIIPS 137          
BLAST of CB610684 vs. ExPASy Swiss-Prot
Match: CYT3_ORYSJ (Cysteine proteinase inhibitor 3 OS=Oryza sativa subsp. japonica GN=Os05g0409300 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.852e-13
Identity = 39/97 (40.21%), Postives = 53/97 (54.64%), Query Frame = 3
Query:   81 LGGVRNVEATANNQEIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXXGTLYGITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNPVAQSHSSTA 371
            L  +R  +A A +      ARFAV E+NK Q + L+F            GTL+ + LE V+ G+K L+ AKVW KPW+ FK + EF  V  S S +A
Sbjct:   50 LAAIRREQAEAEDA-----ARFAVAEYNKNQGAELEFARIVKAKRQVVTGTLHDLMLEVVDSGKKSLYSAKVWVKPWLDFKAVVEFRHVGDSQSQSA 141          
BLAST of CB610684 vs. ExPASy Swiss-Prot
Match: CYT2_ORYSJ (Cysteine proteinase inhibitor 2 OS=Oryza sativa subsp. japonica GN=Os05g0494200 PE=2 SV=3)

HSP 1 Score: 70.0922 bits (170), Expect = 1.292e-11
Identity = 37/91 (40.66%), Postives = 52/91 (57.14%), Query Frame = 3
Query:   81 LGGVRNVEATANNQ-EIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXXGTLYGITLEAVE-GGQKKLFEAKVWEKPWMQFKELKEFNPV 347
            +GG+ +  A   N    V LARFAV EHN K N+ L+             G ++ +T+E  E GG  KL+EAKVWE+ W  FK+L++F P+
Sbjct:   56 VGGIHDAPAGRENDLTTVELARFAVAEHNSKANAMLELERVVKVRQQVVGGFMHYLTVEVKEPGGANKLYEAKVWERAWENFKQLQDFKPL 146          
The following BLAST results are available for this feature:
BLAST of CB610684 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
CYT7_ARATH5.605e-1543.01Cysteine proteinase inhibitor 7 OS=Arabidopsis tha... [more]
CYT3_ORYSJ6.852e-1340.21Cysteine proteinase inhibitor 3 OS=Oryza sativa su... [more]
CYT2_ORYSJ1.292e-1140.66Cysteine proteinase inhibitor 2 OS=Oryza sativa su... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0003_IIIaF_D03 Mature Albedo Citrus sinensis cDNA clone ALBEDO0003_IIIaF_D03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610684 ID=CB610684; Name=CB610684; organism=Citrus sinensis; type=EST; length=698bp
GGGGAAGGAAAGTAGAAAAACATAACTTAAAATCTTCTCATCGCTTTATC
ATCAGACTTACGCAGAAAACAATGGCTACATTGGGCGGTGTTCGTAACGT
TGAAGCAACAGCCAACAATCAGGAGATCGTTAATCTCGCACGCTTCGCTG
TGGATGAGCATAACAAGAAGCAGAATTCAAATCTGCAATTTGTAAAAGTT
GTAAGTGCGAAGCAGCAAGTGGTTTCAGGGACTCTGTACGGCATCACCTT
GGAGGCTGTTGAAGGAGGTCAGAAGAAACTTTTTGAAGCTAAGGTCTGGG
AGAAGCCTTGGATGCAATTCAAGGAGTTGAAAGAATTCAATCCTGTTGCT
CAGTCTCACTCCTCAACCGCTTAGCTTGTGGTGACTGAAGATGACATCTG
TAGCTTGCAATGGATCAAACAAAGAGACAGTATCAATAAGAATGGAGCTA
TAACCATGTTCAGATTATAAAAATAAATGTAACCGGACTTATGAGTTTGG
TTCTTTAATCTTTTGCAAGTTATGTGTCGATTATTTATGGTAGTAGCTGC
AACTCAGCGCAACTTTTATAACTGTGTGAAAAATAATTGAAATGACCTTT
GGTGTTTAATATATATACAAGATTAATCTCTTTCTAGATAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAGATCNGAAAAAAAAAAAAAAAAAAAAA
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