CB610690

Overview
NameCB610690
Unique NameCB610690
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length697
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB610690 vs. ExPASy Swiss-Prot
Match: HSP22_MAIZE (17.8 kDa class II heat shock protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.648e-16
Identity = 52/125 (41.60%), Postives = 67/125 (53.60%), Query Frame = 2
Query:  134 LDVWDPFGGFLSSALTNAPSSA-----RDTSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVT 493
            LDV D   G      T +  SA     RD    A    D KE P A+ F  D+PGL            R+L +SGER +E+ E + K+ R+ER  GKF+R+F LPDNA V++V A   +GVLTVT
Sbjct:   20 LDVPDGDAGAGGDNKTGSGGSATRTYVRDARAMAATPADVKELPGAYAFVVDMPGLGTGDIRVQVEDERVLVVSGERRREEREDDAKYLRMERRMGKFMRKFVLPDNADVDKVAAVCRDGVLTVT 144          
BLAST of CB610690 vs. ExPASy Swiss-Prot
Match: HS157_ARATH (15.7 kDa heat shock protein, peroxisomal OS=Arabidopsis thaliana GN=HSP15.7 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.475e-15
Identity = 42/96 (43.75%), Postives = 58/96 (60.42%), Query Frame = 2
Query:  218 ANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSS-----GKFLRRFRLPDNAKVEQVKASMENGVLTV 490
            + A IDW E+  +H+FK ++PG            G +L I GE  KE++++N  WH  ER +      +FLRR  LP+N KV+QVKA +ENGVLTV
Sbjct:   20 STALIDWMESNNSHIFKINVPGYNKEDIKVQIEEGNVLSIRGEGIKEEKKENLVWHVAEREAFSGGGSEFLRRIELPENVKVDQVKAYVENGVLTV 115          
BLAST of CB610690 vs. ExPASy Swiss-Prot
Match: HSP18_ORYSJ (18.0 kDa class II heat shock protein OS=Oryza sativa subsp. japonica GN=HSP18.0 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.516e-15
Identity = 51/127 (40.16%), Postives = 72/127 (56.69%), Query Frame = 2
Query:  134 LDVWDPFGGFLSS-ALTNAPSSA--RDTSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSK----EQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVT 493
            LD+ D  GG       T  P+ A  RD    A    D K+ P A+ F  D+PGL+           R+L ISGER +    E++E++ K+ R+ER  GKF+R+F LPDNA V+++ A  ++GVLTVT
Sbjct:   20 LDIPDGEGGAAGKQGATGGPTRAYVRDARAMAATPADVKDLPGAYAFVVDMPGLKSSDIKVQVEEERLLVISGERRRGGGEEEKEESCKYLRMERRMGKFMRKFVLPDNADVDKISAVCQDGVLTVT 146          
BLAST of CB610690 vs. ExPASy Swiss-Prot
Match: HSP21_PEA (17.1 kDa class II heat shock protein OS=Pisum sativum GN=HSP17.7 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.605e-15
Identity = 42/106 (39.62%), Postives = 63/106 (59.43%), Query Frame = 2
Query:  182 NAPSSA--RDTSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVT 493
            NAP+    RD    A    D KE P ++VF  D+PG++            +L ISGER +E+E++  K+ ++ER  GK +R+F LP+NA +E + A  ++GVLTVT
Sbjct:   27 NAPTRTYVRDAKAMAATPADVKEHPNSYVFMVDMPGVKSGDIKVQVEDENVLLISGERKREEEKEGVKYLKMERRIGKLMRKFVLPENANIEAISAISQDGVLTVT 132          
BLAST of CB610690 vs. ExPASy Swiss-Prot
Match: HSP21_HELAN (17.9 kDa class II heat shock protein OS=Helianthus annuus GN=HSP17.9 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.249e-14
Identity = 41/106 (38.68%), Postives = 65/106 (61.32%), Query Frame = 2
Query:  182 NAPSSA--RDTSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVT 493
            + PS A  RD    A    D KE P ++VF  D+PGL+            +L ISG+R++E+E++  K+ R+ER  GKF+++F LP++A  +++ A  ++GVLTVT
Sbjct:   35 SGPSRAYVRDARAMAATPADVKECPNSYVFIVDMPGLKSGDIKVQVERDNVLVISGKRNREEEKEGVKYVRMERRMGKFMKKFALPEDANTDKISAICQDGVLTVT 140          
BLAST of CB610690 vs. ExPASy Swiss-Prot
Match: HSP21_IPONI (17.2 kDa class II heat shock protein OS=Ipomoea nil GN=SHSP-1 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.633e-14
Identity = 47/117 (40.17%), Postives = 66/117 (56.41%), Query Frame = 2
Query:  152 FGGFLSSALTNAPSSA--RDTSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKND-KWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVT 493
            + G   S+ ++APS     D    A    D KE P ++VF  D+PGL+            +L ISGER +E EEK   K+ R+ER  GK +R+F LP+NA  E++ A  ++GVLTVT
Sbjct:   19 YAGDDKSSNSSAPSRTFMLDAKAMAATPADVKEYPNSYVFIIDMPGLKSGDIKVQVDGDNVLSISGERKREAEEKEGAKYVRMERRVGKLMRKFVLPENANKEKITAVCQDGVLTVT 135          
BLAST of CB610690 vs. ExPASy Swiss-Prot
Match: HSP21_SOYBN (17.9 kDa class II heat shock protein OS=Glycine max GN=HSP17.9-D PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.745e-14
Identity = 41/106 (38.68%), Postives = 62/106 (58.49%), Query Frame = 2
Query:  182 NAP--SSARDTSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVT 493
            NAP  S  RD    A    D KE P ++VF+ D+PGL+            +L I GER +++E++  K+ R+ER  GK +R+F LP+NA  + + A  ++GVL+VT
Sbjct:   34 NAPTWSYVRDAKAMAATPADVKEYPNSYVFEIDMPGLKSGDIKVQVEDDNLLLICGERKRDEEKEGAKYLRMERRVGKLMRKFVLPENANTDAISAVCQDGVLSVT 139          
BLAST of CB610690 vs. ExPASy Swiss-Prot
Match: HSP22_IPONI (18.8 kDa class II heat shock protein OS=Ipomoea nil GN=SHSP-2 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.094e-14
Identity = 40/100 (40.00%), Postives = 61/100 (61.00%), Query Frame = 2
Query:  200 RDTSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKND--KWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVT 493
            RD    A    D KE P ++VF AD+PG++            +L +SGER++ ++++ D  K+ R+ER  GKF+R+F LP+NA VE + A  ++GVL VT
Sbjct:   48 RDAKAMAATPADVKEYPNSYVFIADMPGVKAAEIKVQVEDDNVLVVSGERTEREKDEKDGVKYLRMERRVGKFMRKFVLPENANVEAINAVYQDGVLQVT 147          
BLAST of CB610690 vs. ExPASy Swiss-Prot
Match: HSP23_MAIZE (17.0 kDa class II heat shock protein OS=Zea mays GN=HSP18 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.803e-13
Identity = 44/98 (44.90%), Postives = 57/98 (58.16%), Query Frame = 2
Query:  200 RDTSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVT 493
            RD    A    D KE   A+ F  D+PGL            R+L ISGER +E+ E + K+ R+ER  GKF+R+F LPDNA V++V A   +GVLTVT
Sbjct:   38 RDARAMAATPADVKELAGAYAFVVDMPGLSTGDIRVQVEDERVLVISGERRREERE-DAKYLRMERRMGKFMRKFVLPDNADVDKVAAVCRDGVLTVT 134          
BLAST of CB610690 vs. ExPASy Swiss-Prot
Match: HS177_ARATH (17.7 kDa class II heat shock protein OS=Arabidopsis thaliana GN=HSP17.7 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.803e-13
Identity = 42/107 (39.25%), Postives = 62/107 (57.94%), Query Frame = 2
Query:  182 NAPSSA--RDTSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKND-KWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVT 493
            N PS A  RD    A    D  E P A+VF  D+PG++            +L +SG+R ++ +E    K+ R+ER  GKF+R+F+LPDNA +E++ A+  +GVL VT
Sbjct:   30 NNPSRAYMRDAKAMAATPADVIEHPDAYVFAVDMPGIKGDEIQVQIENENVLVVSGKRQRDNKENEGVKFVRMERRMGKFMRKFQLPDNADLEKISAACNDGVLKVT 136          
The following BLAST results are available for this feature:
BLAST of CB610690 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
HSP22_MAIZE8.648e-1641.6017.8 kDa class II heat shock protein OS=Zea mays P... [more]
HS157_ARATH1.475e-1543.7515.7 kDa heat shock protein, peroxisomal OS=Arabid... [more]
HSP18_ORYSJ2.516e-1540.1618.0 kDa class II heat shock protein OS=Oryza sati... [more]
HSP21_PEA5.605e-1539.6217.1 kDa class II heat shock protein OS=Pisum sati... [more]
HSP21_HELAN1.249e-1438.6817.9 kDa class II heat shock protein OS=Helianthus... [more]
HSP21_IPONI3.633e-1440.1717.2 kDa class II heat shock protein OS=Ipomoea ni... [more]
HSP21_SOYBN4.745e-1438.6817.9 kDa class II heat shock protein OS=Glycine ma... [more]
HSP22_IPONI8.094e-1440.0018.8 kDa class II heat shock protein OS=Ipomoea ni... [more]
HSP23_MAIZE1.803e-1344.9017.0 kDa class II heat shock protein OS=Zea mays G... [more]
HS177_ARATH1.803e-1339.2517.7 kDa class II heat shock protein OS=Arabidopsi... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0003_IIIaF_D10 Mature Albedo Citrus sinensis cDNA clone ALBEDO0003_IIIaF_D10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610690 ID=CB610690; Name=CB610690; organism=Citrus sinensis; type=EST; length=697bp
GGGATCTTCGATTTGATTGATCAAAACACTTCTGAAGTTGTTGAGCATTT
AATTAGCGCTCCAGTTTGCCATAATGTCACTCATTCCAAGCATCTTCGGT
GGCCGAAGAACCAACGTGTTCGATCCATTTTCATTAGATGTATGGGATCC
TTTCGGCGGGTTCTTGTCCTCTGCCCTTACCAACGCGCCGTCTTCGGCTA
GGGATACATCCCAATTCGCCAATGCAAGAATTGACTGGAAAGAGACTCCT
CAGGCTCATGTATTCAAGGCTGATCTTCCAGGGCTGAGGAAAGAAGAAGT
GAAAGTTGAGGTTGAAGAGGGCAGGATTCTGCAGATAAGCGGGGAGAGGA
GCAAGGAGCAGGAAGAGAAGAATGACAAGTGGCATCGCGTCGAGAGGAGC
AGTGGCAAGTTCCTGAGGAGGTTCAGGTTGCCCGACAATGCTAAGGTGGA
GCAGGTTAAGGCCAGCATGGAGAATGGTGTGCTCACAGTGACTGTTCCTA
AACAGGAGGAGAAGAAACCTGAAGTTAAGGCCATTGAGATCTCTGGCTAA
GTGATAAGTGTAAATGTTTTCAAGATTGTGTCTTTGGTTTGCTAATAAAT
TTGGTACGAAAGCAAAGCCCTTGTGTGTGTGTGTGTGTTTGCAAGAGCTT
CCCTTCCCCCCTGTTTAATTTGATGTGATTATGTTTGTGTGTTTGCA
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