CB610692

Overview
NameCB610692
Unique NameCB610692
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length694
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB610692 vs. ExPASy Swiss-Prot
Match: GSTXA_TOBAC (Probable glutathione S-transferase parA OS=Nicotiana tabacum GN=PARA PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 1.139e-30
Identity = 45/73 (61.64%), Postives = 54/73 (73.97%), Query Frame = 2
Query:    5 RARIPLKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDP 223
            R RI L +K ++YE  EENL  KS LLL+ NPVHKKIP+LIHN K +CESL I+EY+DE W    P +LPSDP
Sbjct:   19 RLRIALALKGIKYEAKEENLSDKSPLLLEMNPVHKKIPILIHNSKAICESLNILEYIDEVWHDKCP-LLPSDP 90          

HSP 2 Score: 58.151 bits (139), Expect = 1.139e-30
Identity = 37/121 (30.58%), Postives = 57/121 (47.11%), Query Frame = 1
Query:  238 ARFWAAYVDEKLFPALKSIGSADGAEAKEAAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMIEVKLLDEVKTPGLFKWAERFCADAAVKDVMPETDKLAEF 600
            ARFWA Y+D+K++   + + S  G E +E A ++ IE L  LE         K +FGG  +GF+D+A   +  W    E      +  E + P L  WA+      +V   +P   K+  F
Sbjct:   96 ARFWADYIDKKIYSTGRRVWSGKG-EDQEEAKKEFIEILKTLEGEL----GNKTYFGGDNLGFVDVALVPFTSWFYSYETCANFSI--EAECPKLVVWAKTCMESESVSKSLPHPHKIYGF 209          
BLAST of CB610692 vs. ExPASy Swiss-Prot
Match: GSTX1_NICPL (Probable glutathione S-transferase MSR-1 OS=Nicotiana plumbaginifolia GN=MSR-1 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.318e-28
Identity = 46/73 (63.01%), Postives = 55/73 (75.34%), Query Frame = 2
Query:    5 RARIPLKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDP 223
            R RI L +K ++YE  EENL  KS LLL+ NPVHKKIP+LIHN KP+CESL I+EY+DE W    P +LPSDP
Sbjct:   19 RLRIALALKGIKYEAKEENLSDKSPLLLEMNPVHKKIPILIHNGKPICESLNILEYIDEVWHEKCP-LLPSDP 90          

HSP 2 Score: 48.521 bits (114), Expect = 1.318e-28
Identity = 34/121 (28.10%), Postives = 54/121 (44.63%), Query Frame = 1
Query:  238 ARFWAAYVDEKLFPALKSIGSADGAEAKEAAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMIEVKLLDEVKTPGLFKWAERFCADAAVKDVMPETDKLAEF 600
            ARFWA Y+D K++   + + S  G E +E A ++ IE    LE         K +FGG  +GF+D+A   +  W    E      +  E +   L  W +    +  V   +P   K+ +F
Sbjct:   96 ARFWANYIDNKIYSTGRRVWSGKG-EDQEEAKKEFIEIFKTLEGEL----GNKTYFGGDNLGFVDVALVPFTSWFYSYETCANFSI--EAECRKLVVW-QNCMENERVSKSLPHPHKIYDF 208          
BLAST of CB610692 vs. ExPASy Swiss-Prot
Match: GSTXA_ARATH (Glutathione S-transferase 103-1A OS=Arabidopsis thaliana GN=103-1A PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 3.596e-25
Identity = 38/73 (52.05%), Postives = 52/73 (71.23%), Query Frame = 2
Query:    5 RARIPLKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDP 223
            R  + LK+K + YE++EE L +KS LLL  NP+HKK+PVL+HN K + ES +I+EY+DE W  +   ILP DP
Sbjct:   20 RVEMALKLKGIPYEYVEEILENKSPLLLALNPIHKKVPVLVHNGKTILESHVILEYIDETWPQN--PILPQDP 90          

HSP 2 Score: 50.8322 bits (120), Expect = 3.596e-25
Identity = 40/134 (29.85%), Postives = 63/134 (47.01%), Query Frame = 1
Query:  238 ARFWAAYVDEKLFPA-LKSIGSADGAEAKEAAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYL------GWVRVTEKMIEVKLLDEVKTPGLFKWAERFCADAAVKDVMPETDKLAEFAKVLAK 618
            ARF+A  VDE++      S+  AD  + +E   EQ+ E ++ LE   V    GK +FGG  +GFLD   G  +      GW     + I ++++ E K P   +W         VKD +P  ++  E    +A+
Sbjct:   96 ARFFAKLVDEQIMNVGFISMARAD-EKGREVLAEQVRELIMYLEKELV----GKDYFGGKTVGFLDFVAGSLIPFCLERGW-----EGIGLEVITEEKFPEFKRWVRNLEKVEIVKDCVPPREEHVEHMNYMAE 219          
BLAST of CB610692 vs. ExPASy Swiss-Prot
Match: GSTU1_ORYSJ (Probable glutathione S-transferase GSTU1 OS=Oryza sativa subsp. japonica GN=GSTU1 PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 6.085e-25
Identity = 38/70 (54.29%), Postives = 57/70 (81.43%), Query Frame = 2
Query:    5 RARIPLKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILP 214
            R RI +  K +E+E+ EE+LG+KS+LLL+SNPVH+KIPVL+H  +PV ESL+I++Y+D+A+  + P +LP
Sbjct:   20 RCRIAMAEKGLEFEYREEDLGNKSDLLLRSNPVHRKIPVLLHAGRPVSESLVILQYLDDAFPGT-PHLLP 88          

HSP 2 Score: 50.8322 bits (120), Expect = 6.085e-25
Identity = 42/132 (31.82%), Postives = 60/132 (45.45%), Query Frame = 1
Query:  232 AVARFWAAYVDEKLFPALKSIGSADGAEAKEAAIEQLIEGLVLLEDAFVKCSKGKPFF---GGSQIGFLDIAFGCYLGWVRVTEKMIEVKLLDEVKTPGLFKWAERFCADAAVKDVMPETDKLAEFAKVLAK 618
            A ARFWA YVD KL+     +    G E + AA  ++ E L  LE         + FF   GG ++GF+D+A   +  W    E+     +  E   P L  WA R     +V   +P  +K+ +F  VL K
Sbjct:  102 ATARFWADYVDRKLYDCGSRLWRLKG-EPQAAAGREMAEILRTLEAEL----GDREFFGGGGGGRLGFVDVALVPFTAWFYSYERCGGFSV--EEVAPRLAAWARRCGRIDSVVKHLPSPEKVYDFVGVLKK 226          
BLAST of CB610692 vs. ExPASy Swiss-Prot
Match: GSTU1_ORYSI (Probable glutathione S-transferase GSTU1 OS=Oryza sativa subsp. indica GN=GSTU1 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.341e-24
Identity = 36/72 (50.00%), Postives = 57/72 (79.17%), Query Frame = 2
Query:    5 RARIPLKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSD 220
            R RI +  K +E+E+ EE+LG+KS+LLL+SNPVH+KIPVL+H  +PV ESL+I++Y+D+A+  +   + P++
Sbjct:   20 RCRIAMAEKGLEFEYREEDLGNKSDLLLRSNPVHRKIPVLLHAGRPVSESLVILQYLDDAFPGTPHLLSPAN 91          

HSP 2 Score: 51.2174 bits (121), Expect = 1.341e-24
Identity = 42/132 (31.82%), Postives = 60/132 (45.45%), Query Frame = 1
Query:  232 AVARFWAAYVDEKLFPALKSIGSADGAEAKEAAIEQLIEGLVLLEDAFVKCSKGKPFF---GGSQIGFLDIAFGCYLGWVRVTEKMIEVKLLDEVKTPGLFKWAERFCADAAVKDVMPETDKLAEFAKVLAK 618
            A ARFWA YVD KL+     +    G E + AA  ++ E L  LE         + FF   GG ++GF+D+A   +  W    E+     +  E   P L  WA R     +V   +P  +K+ +F  VL K
Sbjct:  102 ATARFWADYVDRKLYDCGSRLWRLKG-EPQAAAGREMAEILRTLEAEL----GDREFFGGGGGGRLGFVDVALVPFTAWFYSYERCGGFSV--EEVAPRLAAWARRCGRIDSVAKHLPSPEKVYDFVGVLKK 226          
The following BLAST results are available for this feature:
BLAST of CB610692 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
GSTXA_TOBAC1.139e-3061.64Probable glutathione S-transferase parA OS=Nicotia... [more]
GSTX1_NICPL1.318e-2863.01Probable glutathione S-transferase MSR-1 OS=Nicoti... [more]
GSTXA_ARATH3.596e-2552.05Glutathione S-transferase 103-1A OS=Arabidopsis th... [more]
GSTU1_ORYSJ6.085e-2554.29Probable glutathione S-transferase GSTU1 OS=Oryza ... [more]
GSTU1_ORYSI1.341e-2450.00Probable glutathione S-transferase GSTU1 OS=Oryza ... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0003_IIIaF_B06 Mature Albedo Citrus sinensis cDNA clone ALBEDO0003_IIIaF_B06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610692 ID=CB610692; Name=CB610692; organism=Citrus sinensis; type=EST; length=694bp
AGGGAGGGCAAGAATCCCACTTAAGATCAAGTCTGTGGAGTATGAGTTTC
TGGAGGAGAATTTGGGATCCAAAAGCGAGCTTCTGCTTAAATCAAACCCT
GTTCACAAGAAAATCCCAGTTCTGATTCACAATGATAAGCCTGTTTGCGA
ATCTCTCATCATTGTCGAGTACGTAGATGAGGCTTGGTCCTCTTCAGGTC
CCTCTATTCTTCCTTCTGATCCTATGACCGTGCCGTTGCTCGTTTCTGGG
CCGCTTATGTTGATGAGAAGTTGTTCCCTGCCTTGAAAAGCATTGGTAGT
GCAGATGGAGCGGAAGCTAAGGAAGCTGCGATTGAGCAATTGATTGAAGG
CTTGGTTTTGCTGGAGGATGCTTTTGTTAAGTGTAGCAAAGGGAAGCCTT
TCTTTGGTGGAAGCCAAATTGGGTTTCTTGACATTGCATTTGGTTGCTAC
TTGGGATGGGTGAGAGTGACAGAGAAAATGATTGAGGTGAAGCTCCTTGA
TGAAGTCAAAACTCCTGGACTGTTCAAATGGGCTGAGAGATTCTGTGCTG
ATGCCGCTGTCAAAGATGTTATGCCTGAGACTGATAAGCTTGCAGAGTTT
GCTAAGGTTCTTGCCAAACTCAGAGCTTCTGGCAAATGGAATTAAGAAGC
TTAATTCTGTGCTTGGAGGGGCACAAAAAAAAAAGAAAAAAAAA
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