CB610693

Overview
NameCB610693
Unique NameCB610693
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length695
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB610693 vs. ExPASy Swiss-Prot
Match: CATS_CANFA (Cathepsin S OS=Canis familiaris GN=CTSS PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.159e-12
Identity = 50/140 (35.71%), Postives = 69/140 (49.29%), Query Frame = 3
Query:  300 RRYGKIYESVEEMKLRFATFSKNLDLIRSTNCK---GL-SYRLGLNKFADWSWEE----FQRHRLGAAQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSDEAAYHQAFGKGISLSEQQLVN 695
            + Y K Y+   E   R   + KNL  +   N +   G+ SY LG+N   D + EE        R+ +    + T + N       LP++ DWRE G V+ VK QG CG+CW FS  G+ EA      GK +SLS Q LV+
Sbjct:   33 KTYSKQYKEENEEVARRLIWEKNLKFVMLHNLEHSMGMHSYDLGMNHLGDMTGEEVISLMGSLRVPSQWQRNVTYRSNSN---QKLPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVD 169          
BLAST of CB610693 vs. ExPASy Swiss-Prot
Match: CATL1_MOUSE (Cathepsin L1 OS=Mus musculus GN=Ctsl1 PE=1 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 1.159e-12
Identity = 47/132 (35.61%), Postives = 72/132 (54.55%), Query Frame = 3
Query:  312 KIYESVEEMKLRFATFSKNLDLIRSTNCKGLS----YRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSDEAAYHQAFGKGISLSEQQLVN 695
            ++Y + EE + R A + KN+ +I+  N +  +    + + +N F D + EEF++   G         +   +     +P++ DWRE G V+PVK+QG CGSCW FS +G  E       GK ISLSEQ LV+
Sbjct:   38 RLYGTNEE-EWRRAIWEKNMRMIQLHNGEYSNGQHGFSMEMNAFGDMTNEEFRQVVNGYRHQKHKKGRLFQEPLMLKIPKSVDWREKGCVTPVKNQGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVD 168          
BLAST of CB610693 vs. ExPASy Swiss-Prot
Match: CATV_NPVST (Viral cathepsin OS=Spodoptera litura multicapsid nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.514e-12
Identity = 46/148 (31.08%), Postives = 70/148 (47.30%), Query Frame = 3
Query:  285 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGN---HKLTADVL--------PETKDWRESGIVSPVKDQGHCGSCWTFSTTGSDEAAYHQAFGKGISLSEQQLVN 695
            +  F +++ K Y + ++    F  F +NL  + + N        G+NKF+D     F     G   N   +T  N   ++L   V         PE+ DWR+   V+ VK+QG CGSCW F+  G+ E+ Y       I LSEQQL++
Sbjct:   33 YENFIKQHNKEYTTPDQRDAAFVNFKRNLADMNAMNNVSNQAVYGINKFSDIDKITFVNEHAGLVSNLINSTDSNFDPYRLCEYVTVAGPSARTPESFDWRKLNKVTKVKEQGVCGSCWAFAAIGNIESQYAIMHDSLIDLSEQQLLD 180          
BLAST of CB610693 vs. ExPASy Swiss-Prot
Match: CATV_NPVCD (Viral cathepsin OS=Choristoneura fumiferana defective polyhedrosis virus GN=Vcath PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.514e-12
Identity = 50/142 (35.21%), Postives = 68/142 (47.89%), Query Frame = 3
Query:  285 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLNKFADWSWEEFQRHRLGAA-----QNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSDEAAYHQAFGKGISLSEQQLVN 695
            F  F   + K Y S  E   RF  F  NL+ I + N    S +  +NKF+D S +E      G +     QN       N     D  P   DWR    V+ VK+QG CG+CW F+T GS E+ +     + I+LSEQQL++
Sbjct:   28 FEDFLHNFNKNYSSKSEKLHRFKIFQHNLEEIINKNLNDTSAQYEINKFSDLSKDETISKYTGLSLPLQNQNFCEVVVLNRP--PDKGPLEFDWRRLNKVTSVKNQGTCGACWAFATLGSLESQFAIKHDQLINLSEQQLID 167          
BLAST of CB610693 vs. ExPASy Swiss-Prot
Match: CATV_NPVAP (Viral cathepsin OS=Antheraea pernyi nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.514e-12
Identity = 50/143 (34.97%), Postives = 69/143 (48.25%), Query Frame = 3
Query:  285 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLNKFADWSWEEFQRHRLGAA-----QN-CSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSDEAAYHQAFGKGISLSEQQLVN 695
            F  F  ++ K Y S  E   RF  F  NL+ I + N    S +  +NKF+D S +E      G +     QN C            D  P   DWR    V+ VK+QG CG+CW F+T GS E+ +     + I+LSEQQL++
Sbjct:   28 FEEFLHKFNKNYSSESEKLRRFKIFQHNLEEIINKNQNDTSAQYEINKFSDLSKDETISKYTGLSLPLQKQNFCEVVVLDR---PPDKGPLEFDWRRLNKVTSVKNQGMCGACWAFATLGSLESQFAIKHDQLINLSEQQLID 167          
BLAST of CB610693 vs. ExPASy Swiss-Prot
Match: CATV_NPVCF (Viral cathepsin OS=Choristoneura fumiferana nuclear polyhedrosis virus GN=Vcath PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.977e-12
Identity = 50/143 (34.97%), Postives = 69/143 (48.25%), Query Frame = 3
Query:  285 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLNKFADWSWEEFQRHRLGAA-----QN-CSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSDEAAYHQAFGKGISLSEQQLVN 695
            F  F  ++ K Y S  E   RF  F  NL+ I + N    + +  +NKFAD S +E      G +     QN C            D  P   DWR    V+ VK+QG CG+CW F+T GS E+ +     + I+LSEQQL++
Sbjct:   28 FEDFLHKFNKSYSSESEKLRRFQIFRHNLEEIINKNHNDSTAQYEINKFADLSKDETISKYTGLSLPLQTQNFCEVVVLDR---PPDKGPLEFDWRRLNKVTSVKNQGMCGACWAFATLGSLESQFAIKHNQFINLSEQQLID 167          
BLAST of CB610693 vs. ExPASy Swiss-Prot
Match: CATV_NPVOP (Viral cathepsin OS=Orgyia pseudotsugata multicapsid polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.372e-12
Identity = 49/143 (34.27%), Postives = 70/143 (48.95%), Query Frame = 3
Query:  285 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLNKFADWSWEEFQRHRLGAA-----QN-CSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSDEAAYHQAFGKGISLSEQQLVN 695
            F  F  ++ K Y S  E   RF  F  NL+ I + N    + +  +NKF+D S EE      G +     QN C            D  P   DWR+   V+ VK+QG CG+CW F+T GS E+ +   + + I+LSEQQ ++
Sbjct:   28 FEDFLHKFNKNYSSESEKLHRFKIFQHNLEEIINKNQNDSTAQYEINKFSDLSKEEAISKYTGLSLPHQTQNFCEVVILDR---PPDRGPLEFDWRQFNKVTSVKNQGVCGACWAFATLGSLESQFAIKYNRLINLSEQQFID 167          
BLAST of CB610693 vs. ExPASy Swiss-Prot
Match: CATS_RAT (Cathepsin S OS=Rattus norvegicus GN=Ctss PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.404e-12
Identity = 50/129 (38.76%), Postives = 66/129 (51.16%), Query Frame = 3
Query:  333 EMKLRFATFSKNLDLIRSTNCK---GL-SYRLGLNKFADWSWEEFQRH----RLGAAQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSDEAAYHQAFGKGISLSEQQLVN 695
            E  +R   + KNL  I   N +   G+ SY +G+N   D + EE   +    R+    N S T K +   T   LP++ DWRE G V+ VK QG CGSCW FS  G+ E       GK +SLS Q LV+
Sbjct:   42 EEDVRRLIWEKNLKFIMLHNLEHSMGMHSYSVGMNHMGDMTPEEVIGYMGSLRIPRPWNRSGTLKSSSNQT---LPDSVDWREKGCVTNVKYQGSCGSCWAFSAEGALEGQLKLKTGKLVSLSAQNLVD 167          
BLAST of CB610693 vs. ExPASy Swiss-Prot
Match: TEST2_RAT (Testin-2 OS=Rattus norvegicus GN=Testin PE=1 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 5.752e-12
Identity = 47/135 (34.81%), Postives = 68/135 (50.37%), Query Frame = 3
Query:  303 RYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYR----LGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSDEAAYHQAFGKGISLSEQQLVN 695
            ++GK Y   EE +L+ A + KN  +I   N + L  R    + +N F D +  EF +   G  +     T          +P+  DWR+ G V+PVK+QGHC S W FS TGS E    +   + I LSEQ L++
Sbjct:   35 KHGKTYNMNEE-RLKRAVWEKNFKMIELHNWEYLEGRHDFTMAMNAFGDLTNIEFVKMMTGFQRQKIKKTHIFQDHQFLYVPKRVDWRQLGYVTPVKNQGHCASSWAFSATGSLEGQMFRKTERLIPLSEQNLLD 168          
BLAST of CB610693 vs. ExPASy Swiss-Prot
Match: CATV_NPVAH (Viral cathepsin OS=Adoxophyes honmai nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.512e-12
Identity = 47/149 (31.54%), Postives = 62/149 (41.61%), Query Frame = 3
Query:  285 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLNKFADWSWEEFQRHRLGAAQN------------CSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSDEAAYHQAFGKGISLSEQQLVN 695
            F  F   Y K Y   +    RF  F +NL+ I   N    S    +NKF+D S  E      G                C+           D LP+  DWR +  ++ VKDQG CGSCW  +  G+ E  Y       I+LSEQQL++
Sbjct:   32 FETFIINYNKQYPDTKTKNYRFKIFKQNLEDINEKNKLNDSAIYNINKFSDLSKNELLTKYTGLTSKKPSNMVRSTSNFCNVIHLDAPPDVHDELPQNFDWRVNNKMTSVKDQGACGSCWAHAAVGTLETLYAIKHNYLINLSEQQLID 180          
The following BLAST results are available for this feature:
BLAST of CB610693 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 119
Match NameE-valueIdentityDescription
CATS_CANFA1.159e-1235.71Cathepsin S OS=Canis familiaris GN=CTSS PE=2 SV=1[more]
CATL1_MOUSE1.159e-1235.61Cathepsin L1 OS=Mus musculus GN=Ctsl1 PE=1 SV=2[more]
CATV_NPVST1.514e-1231.08Viral cathepsin OS=Spodoptera litura multicapsid n... [more]
CATV_NPVCD1.514e-1235.21Viral cathepsin OS=Choristoneura fumiferana defect... [more]
CATV_NPVAP1.514e-1234.97Viral cathepsin OS=Antheraea pernyi nuclear polyhe... [more]
CATV_NPVCF1.977e-1234.97Viral cathepsin OS=Choristoneura fumiferana nuclea... [more]
CATV_NPVOP3.372e-1234.27Viral cathepsin OS=Orgyia pseudotsugata multicapsi... [more]
CATS_RAT4.404e-1238.76Cathepsin S OS=Rattus norvegicus GN=Ctss PE=2 SV=1[more]
TEST2_RAT5.752e-1234.81Testin-2 OS=Rattus norvegicus GN=Testin PE=1 SV=2[more]
CATV_NPVAH7.512e-1231.54Viral cathepsin OS=Adoxophyes honmai nucleopolyhed... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0003_IIIaF_B07 Mature Albedo Citrus sinensis cDNA clone ALBEDO0003_IIIaF_B07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610693 ID=CB610693; Name=CB610693; organism=Citrus sinensis; type=EST; length=695bp
GGGGGCCGAATAATACTATTGTTCATAGGGATCATTCATTTAATCCGAAG
CCCTTGAGTGCAGTGTGCTCTCTCCAAACAAAGCAGACACAATCATTAGG
CATGGCTCGCCCCGTACAGTTGGTCTCGTCCGTCATCTTGTTGCTTTGCT
GCGCTGCCGCAGCATCAGCATCAGCATCAAGCTTCGACGACTCCAATCCG
ATCAGATTGGTATCATCGGACGGTCTCCGTGACTTCGAGACCTCCGTCCT
CCAGGTGATCGGCCAAGCCCGCCATGCTCTCTCCTTTGCCCGTTTTGCTC
GCAGGTATGGGAAGATTTACGAGTCCGTTGAGGAGATGAAGCTCCGGTTC
GCGACTTTCTCCAAGAACTTGGATTTAATCAGATCTACCAATTGTAAAGG
CCTATCTTACAGGCTCGGGTTGAACAAGTTTGCTGACTGGAGCTGGGAAG
AGTTCCAAAGGCACAGGTTGGGAGCTGCGCAAAACTGCTCTGCCACTACA
AAAGGAAATCACAAGCTTACTGCTGATGTGCTTCCAGAAACGAAAGACTG
GAGGGAATCTGGCATAGTAAGCCCAGTTAAAGACCAAGGTCACTGTGGAT
CTTGCTGGACTTTCAGCACGACTGGATCTGATGAGGCTGCTTACCACCAG
GCCTTTGGAAAGGGTATCTCTTTGTCAGAACAGCAGCTTGTAAAC
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