CB610695

Overview
NameCB610695
Unique NameCB610695
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length494
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB610695 vs. ExPASy Swiss-Prot
Match: NLTP2_SORBI (Non-specific lipid-transfer protein 2 OS=Sorghum bicolor GN=LTP2 PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 7.835e-15
Identity = 36/90 (40.00%), Postives = 52/90 (57.78%), Query Frame = 1
Query:  103 ITCEQVTIWLTPCISYGV-LGGAVQPACCEGIRALNAASKTTEDRRTQCNCVKEGAARIPGLDYDRVNMLPDICRSKCPYKLTHDLDCSK 369
            +TC QV+  + PC+SY    G      CC G+R+LN+A++TT DRR  CNC+K  A  I GL+  +   +P  C    PY ++   DCS+
Sbjct:   31 VTCGQVSSAIGPCLSYARGQGSGPSAGCCSGVRSLNSAARTTADRRAACNCLKNAARGIRGLNVGKAASIPSKCGVSIPYTISTSTDCSR 120          
BLAST of CB610695 vs. ExPASy Swiss-Prot
Match: NLTP_MAIZE (Non-specific lipid-transfer protein OS=Zea mays PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.023e-14
Identity = 37/90 (41.11%), Postives = 50/90 (55.56%), Query Frame = 1
Query:  103 ITCEQVTIWLTPCISYGV-LGGAVQPACCEGIRALNAASKTTEDRRTQCNCVKEGAARIPGLDYDRVNMLPDICRSKCPYKLTHDLDCSK 369
            I+C QV   + PCISY    G      CC G+R+LN A++TT DRR  CNC+K  AA + GL+      +P  C    PY ++   DCS+
Sbjct:   29 ISCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGVSGLNAGNAASIPSKCGVSIPYTISTSTDCSR 118          
BLAST of CB610695 vs. ExPASy Swiss-Prot
Match: NLTP_ELECO (Non-specific lipid-transfer protein OS=Eleusine coracana PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.023e-14
Identity = 37/91 (40.66%), Postives = 59/91 (64.84%), Query Frame = 1
Query:  103 ITCEQVTIWLTPCISYGVLGGAVQPACCE-GIRALNAASKTTEDRRTQCNC-VKEGAARIPGLDYDRVNMLPDICRSKCPYKLTHDLDCSK 369
            I+C QV+  + PC++Y    GA   A C+ G+R+LNAA++TT DRR  CNC +K  A+R+ GL+  + + +P  C  + PY ++  +DCS+
Sbjct:    2 ISCGQVSSAIGPCLAYARGAGAAPSASCQSGVRSLNAAARTTADRRAACNCSLKSAASRVSGLNAGKASSIPGRCGVRLPYAISASIDCSR 92          
BLAST of CB610695 vs. ExPASy Swiss-Prot
Match: NLTP2_SOLPN (Non-specific lipid-transfer protein 2 OS=Solanum pennellii GN=LTP2 PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.746e-14
Identity = 39/93 (41.94%), Postives = 51/93 (54.84%), Query Frame = 1
Query:  103 ITCEQVTIWLTPCISY----GVLGGAVQPACCEGIRALNAASKTTEDRRTQCNCVKEGAARIPGLDYDRVNMLPDICRSKCPYKLTHDLDCSK 369
            +TC QVT  L PC+ Y    G LGG     CC G++ L   ++TT DR+T C C+K  A+   GLD  +   LP  C    PYK++   DCSK
Sbjct:   25 LTCGQVTSTLAPCLPYLMNRGPLGG-----CCGGVKGLLGQAQTTVDRQTACTCLKSAASSFTGLDLGKAASLPSTCSVNIPYKISPSTDCSK 112          
BLAST of CB610695 vs. ExPASy Swiss-Prot
Match: SCA_LILLO (Stigma/stylar cysteine-rich adhesin OS=Lilium longiflorum GN=SCA PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 2.977e-14
Identity = 38/89 (42.70%), Postives = 48/89 (53.93%), Query Frame = 1
Query:  103 ITCEQVTIWLTPCISYGVLGGAVQPACCEGIRALNAASKTTEDRRTQCNCVKEGAARIPGLDYDRVNMLPDICRSKCPYKLTHDLDCSK 369
            ITC QV   LT C+ Y   GG + P CC G+R LN  +KTT DR+T CNC+K       GL+   V  +P  C    PY +    DC+K
Sbjct:   23 ITCGQVDSDLTSCLGYARKGGVIPPGCCAGVRTLNNLAKTTPDRQTACNCLKSLVNPSLGLNAAIVAGIPGKCGVNIPYPIRMQTDCNK 111          
BLAST of CB610695 vs. ExPASy Swiss-Prot
Match: NLTP3_PRUDU (Non-specific lipid-transfer protein 3 OS=Prunus dulcis PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 2.977e-14
Identity = 37/92 (40.22%), Postives = 55/92 (59.78%), Query Frame = 1
Query:  103 ITCEQVTIWLTPCISYGVLGGAVQPACCEGIRALNAASKTTEDRRTQCNCVKEGAARIPGLDYDRVNM-----LPDICRSKCPYKLTHDLDC 363
            ++C QV   LTPCI+Y   GGA+ P+CC G+R+L + ++TT DR++ CNC+K+    + G+ Y   N      LP  C    PYK++   DC
Sbjct:   31 VSCGQVVNNLTPCINYVANGGALNPSCCTGVRSLYSLAQTTADRQSICNCLKQA---VNGIPYTNANAGLAAGLPGKCGVNIPYKISPSTDC 119          
BLAST of CB610695 vs. ExPASy Swiss-Prot
Match: NLTP2_SOLLC (Non-specific lipid-transfer protein 2 OS=Solanum lycopersicum GN=LE16 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 3.889e-14
Identity = 38/92 (41.30%), Postives = 52/92 (56.52%), Query Frame = 1
Query:  103 ITCEQVTIWLTPCISY----GVLGGAVQPACCEGIRALNAASKTTEDRRTQCNCVKEGAARIPGLDYDRVNMLPDICRSKCPYKLTHDLDCS 366
            ++C +VT  L PC+ Y    G LGG     CC G++ L  A+KT EDR+T C C+K  A  I G+D  +   LP +C    PYK++   DCS
Sbjct:   25 LSCGEVTSGLAPCLPYLEGRGPLGG-----CCGGVKGLLGAAKTPEDRKTACTCLKSAANSIKGIDTGKAAGLPGVCGVNIPYKISPSTDCS 111          
BLAST of CB610695 vs. ExPASy Swiss-Prot
Match: NLTP1_TOBAC (Non-specific lipid-transfer protein 1 OS=Nicotiana tabacum GN=LTP1 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 8.663e-14
Identity = 39/93 (41.94%), Postives = 53/93 (56.99%), Query Frame = 1
Query:  103 ITCEQVTIWLTPCISY----GVLGGAVQPACCEGIRALNAASKTTEDRRTQCNCVKEGAARIPGLDYDRVNMLPDICRSKCPYKLTHDLDCSK 369
            ITC QVT  L PC++Y    G LG      CC G++AL  +++TTEDR+  C C+K  A  I G++  +   LP  C    PYK++   DCSK
Sbjct:   25 ITCGQVTSNLAPCLAYLRNTGPLG-----RCCGGVKALVNSARTTEDRQIACTCLKSAAGAISGINLGKAAGLPSTCGVNIPYKISPSTDCSK 112          
BLAST of CB610695 vs. ExPASy Swiss-Prot
Match: NLTP1_SORBI (Non-specific lipid-transfer protein 1 OS=Sorghum bicolor GN=LTP1 PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.930e-13
Identity = 36/90 (40.00%), Postives = 51/90 (56.67%), Query Frame = 1
Query:  103 ITCEQVTIWLTPCISYGV-LGGAVQPACCEGIRALNAASKTTEDRRTQCNCVKEGAARIPGLDYDRVNMLPDICRSKCPYKLTHDLDCSK 369
            I+C QV+  +  C+SY    G A    CC G+R+LN+A++TT DRR  CNC+K  A  I GL+      +P  C    PY ++   DCS+
Sbjct:   27 ISCGQVSSAIALCLSYARGQGFAPSAGCCSGVRSLNSAARTTADRRAACNCLKNAARGISGLNAGNAASIPSKCGVSVPYTISTSTDCSR 116          
BLAST of CB610695 vs. ExPASy Swiss-Prot
Match: NLTP1_ARATH (Non-specific lipid-transfer protein 1 OS=Arabidopsis thaliana GN=LTP1 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.930e-13
Identity = 36/89 (40.45%), Postives = 52/89 (58.43%), Query Frame = 1
Query:  103 ITCEQVTIWLTPCISYGVLGGAVQPACCEGIRALNAASKTTEDRRTQCNCVKEGAARI--PGLDYDRVNMLPDICRSKCPYKLTHDLDC 363
            ++C  V   L  CI Y + GG + PACC G++ LN+ +KTT DR+  CNC+ +GAAR    GL+  R   +P  C    PYK++   +C
Sbjct:   27 LSCGSVNSNLAACIGYVLQGGVIPPACCSGVKNLNSIAKTTPDRQQACNCI-QGAARALGSGLNAGRAAGIPKACGVNIPYKISTSTNC 114          
The following BLAST results are available for this feature:
BLAST of CB610695 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
NLTP2_SORBI7.835e-1540.00Non-specific lipid-transfer protein 2 OS=Sorghum b... [more]
NLTP_MAIZE1.023e-1441.11Non-specific lipid-transfer protein OS=Zea mays PE... [more]
NLTP_ELECO1.023e-1440.66Non-specific lipid-transfer protein OS=Eleusine co... [more]
NLTP2_SOLPN1.746e-1441.94Non-specific lipid-transfer protein 2 OS=Solanum p... [more]
SCA_LILLO2.977e-1442.70Stigma/stylar cysteine-rich adhesin OS=Lilium long... [more]
NLTP3_PRUDU2.977e-1440.22Non-specific lipid-transfer protein 3 OS=Prunus du... [more]
NLTP2_SOLLC3.889e-1441.30Non-specific lipid-transfer protein 2 OS=Solanum l... [more]
NLTP1_TOBAC8.663e-1441.94Non-specific lipid-transfer protein 1 OS=Nicotiana... [more]
NLTP1_SORBI1.930e-1340.00Non-specific lipid-transfer protein 1 OS=Sorghum b... [more]
NLTP1_ARATH1.930e-1340.45Non-specific lipid-transfer protein 1 OS=Arabidops... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0003_IIIaF_B09 Mature Albedo Citrus sinensis cDNA clone ALBEDO0003_IIIaF_B09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610695 ID=CB610695; Name=CB610695; organism=Citrus sinensis; type=EST; length=494bp
GGGGAATGCATAAACCATAATTACAATGGCACAGTGTCTCTTGCAACAGT
GCTATTGTTATTGTTGGCTGCCACTACGGCTCCCCTGAATGTAGCAACAG
CAATAACATGTGAGCAAGTGACAATCTGGCTGACACCATGCATCAGCTAT
GGTGTATTAGGTGGGGCTGTTCAGCCAGCTTGTTGTGAAGGCATTAGAGC
TTTGAATGCTGCTTCAAAAACCACAGAAGATAGAAGGACCCAATGTAATT
GTGTGAAGGAAGGCGCTGCTAGGATCCCTGGACTCGACTATGATCGTGTT
AATATGCTTCCTGACATTTGTCGGAGTAAATGTCCTTATAAACTTACACA
TGATCTTGATTGCTCTAAGTGCGCCCTTAATTCTTATCCTAGCTAGCCTG
TTATTGCTTGTTCTCTTATTCATTGTTTTGAATTTTAGGCCCTTTCCGAG
CCGATCATTTACCCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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