CB610695

Overview
NameCB610695
Unique NameCB610695
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length494
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB610695 vs. ExPASy Swiss-Prot
Match: NLTP4_ORYSJ (Non-specific lipid-transfer protein 4 OS=Oryza sativa subsp. japonica GN=Os12g0114500 PE=3 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 3.292e-13
Identity = 37/91 (40.66%), Postives = 51/91 (56.04%), Query Frame = 1
Query:  103 ITCEQVTIWLTPCISYGVLGGAVQPA--CCEGIRALNAASKTTEDRRTQCNCVKEGAARIPGLDYDRVNMLPDICRSKCPYKLTHDLDCSK 369
            +TC QV   L PCI Y   G    P   CC+G+R LN+A+ TT DR+T C C+K+  + + GL  D V  +P  C    PY ++   DCS+
Sbjct:   28 VTCGQVVSMLAPCIMYAT-GRVSAPTGGCCDGVRTLNSAAATTADRQTTCACLKQQTSAMGGLRPDLVAGIPSKCGVNIPYAISPSTDCSR 117          
BLAST of CB610695 vs. ExPASy Swiss-Prot
Match: NLTP1_LENCU (Non-specific lipid-transfer protein 1 OS=Lens culinaris PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 3.292e-13
Identity = 35/88 (39.77%), Postives = 49/88 (55.68%), Query Frame = 1
Query:  103 ITCEQVTIWLTPCISYGVLGGAVQPACCEGIRALNAASKTTEDRRTQCNCVKEGAARIPGLDYDRVNMLPDICRSKCPYKLTHDLDCS 366
            I+C  V+  L PC++Y   G    P CC G++ LN A++TT DRR  CNC+K  A  I GL    V  LP  C  + PY ++   +C+
Sbjct:   27 ISCGTVSGALVPCLTYLKGGPGPSPQCCGGVKRLNGAARTTIDRRAACNCLKSSAGSISGLKPGNVATLPGKCGVRLPYTISTSTNCN 114          
BLAST of CB610695 vs. ExPASy Swiss-Prot
Match: NLTP2_SOLCI (Non-specific lipid-transfer protein 2 OS=Solanum chilense PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 5.615e-13
Identity = 37/93 (39.78%), Postives = 49/93 (52.69%), Query Frame = 1
Query:  103 ITCEQVTIWLTPCISY----GVLGGAVQPACCEGIRALNAASKTTEDRRTQCNCVKEGAARIPGLDYDRVNMLPDICRSKCPYKLTHDLDCSK 369
            +TC QVT  L PC+ Y    G LGG     CC G++ L   ++TT DR+  C C+K  A+    LD  +   LP  C    PYK++   DCSK
Sbjct:   25 LTCGQVTSTLAPCLPYLMNRGPLGG-----CCGGVKGLLGQAQTTVDRQAACACLKSAASSFTDLDLGKAASLPSTCNVNIPYKISPSTDCSK 112          
BLAST of CB610695 vs. ExPASy Swiss-Prot
Match: NLTP4_LENCU (Non-specific lipid-transfer protein 4 (Fragment) OS=Lens culinaris PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 9.578e-13
Identity = 34/88 (38.64%), Postives = 49/88 (55.68%), Query Frame = 1
Query:  103 ITCEQVTIWLTPCISYGVLGGAVQPACCEGIRALNAASKTTEDRRTQCNCVKEGAARIPGLDYDRVNMLPDICRSKCPYKLTHDLDCS 366
            I+C  VT  L+PC++Y   G    P CC G++ L AA+ TT DR+  CNC+K  A  I  L+ +    LP  C    PYK++   +C+
Sbjct:   19 ISCGAVTSDLSPCLTYLTGGPGPSPQCCGGVKKLLAAANTTPDRQAACNCLKSAAGSITKLNTNNAAALPGKCGVNIPYKISTSTNCN 106          
BLAST of CB610695 vs. ExPASy Swiss-Prot
Match: NLTP_BETVU (Non-specific lipid-transfer protein OS=Beta vulgaris GN=IWF1' PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.251e-12
Identity = 37/90 (41.11%), Postives = 52/90 (57.78%), Query Frame = 1
Query:  103 ITCEQVTIWLTPCISYGVLGGAVQP--ACCEGIRALNAASKTTEDRRTQCNCVKEGAARIPGLDYDRVNMLPDICRSKCPYKLTHDLDCS 366
            ITC  V   L PCI Y  L GA  P  ACC GI++LN+A+ +  DR+T C C+K  A  I G++Y +   LP  C    PY ++ + +C+
Sbjct:   27 ITCGLVASKLAPCIGY--LQGAPGPSAACCGGIKSLNSAAASPADRKTACTCLKSAATSIKGINYGKAASLPRQCGVSVPYAISPNTNCN 114          
BLAST of CB610695 vs. ExPASy Swiss-Prot
Match: NLTP6_LENCU (Non-specific lipid-transfer protein 6 OS=Lens culinaris PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.251e-12
Identity = 34/88 (38.64%), Postives = 49/88 (55.68%), Query Frame = 1
Query:  103 ITCEQVTIWLTPCISYGVLGGAVQPACCEGIRALNAASKTTEDRRTQCNCVKEGAARIPGLDYDRVNMLPDICRSKCPYKLTHDLDCS 366
            I+C  VT  L+PC++Y   G    P CC G++ L AA+ TT DR+  CNC+K  A  I  L+ +    LP  C    PYK++   +C+
Sbjct:   27 ISCGAVTSDLSPCLTYLTGGPGPSPQCCGGVKKLLAAANTTPDRQAACNCLKSAAGSITKLNTNNAAALPGKCGVDIPYKISTSTNCN 114          
BLAST of CB610695 vs. ExPASy Swiss-Prot
Match: NLTP5_LENCU (Non-specific lipid-transfer protein 5 OS=Lens culinaris PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.251e-12
Identity = 34/88 (38.64%), Postives = 50/88 (56.82%), Query Frame = 1
Query:  103 ITCEQVTIWLTPCISYGVLGGAVQPACCEGIRALNAASKTTEDRRTQCNCVKEGAARIPGLDYDRVNMLPDICRSKCPYKLTHDLDCS 366
            I+C  VT  L+PC++Y   G    P CC G++ L AA+ TT DR+  CNC+K  A+ I  L+ +    LP  C    PYK++   +C+
Sbjct:   26 ISCGAVTGDLSPCLTYLTGGPGPSPQCCGGVKKLLAAANTTPDRQAACNCMKSAASSITKLNTNNAAALPGKCGVNIPYKISTSTNCN 113          
BLAST of CB610695 vs. ExPASy Swiss-Prot
Match: NLTP3_HORVU (Non-specific lipid-transfer protein 3 OS=Hordeum vulgare GN=LTP3 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.251e-12
Identity = 34/90 (37.78%), Postives = 54/90 (60.00%), Query Frame = 1
Query:  103 ITCEQVTIWLTPCISYGVLGGAVQP-ACCEGIRALNAASKTTEDRRTQCNCVKEGAARIPGLDYDRVNMLPDICRSKCPYKLTHDLDCSK 369
            I+C QV+  L+PCISY    GA  P ACC G++ L  A+++T D++  C C+K  A  I G++  +V+ +P  C    P+ ++   DC+K
Sbjct:   27 ISCGQVSSALSPCISYARGNGAKPPVACCSGVKRLAGAAQSTADKQAACRCLKSLATSIKGINMGKVSGVPGKCGVSVPFPISMSTDCNK 116          
BLAST of CB610695 vs. ExPASy Swiss-Prot
Match: NLTP3_ARATH (Non-specific lipid-transfer protein 3 OS=Arabidopsis thaliana GN=LTP3 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.251e-12
Identity = 33/88 (37.50%), Postives = 49/88 (55.68%), Query Frame = 1
Query:  103 ITCEQVTIWLTPCISYGVLGGAVQPACCEGIRALNAASKTTEDRRTQCNCVKEGAARIPGLDYDRVNMLPDICRSKCPYKLTHDLDCS 366
            I+C  V   L PC +Y   GG V P+CC G++ LN+ +KTT DR+  C C++  A  I GL+    + LP  C    PY ++   +C+
Sbjct:   25 ISCGTVAGSLAPCATYLSKGGLVPPSCCAGVKTLNSMAKTTPDRQQACRCIQSTAKSISGLNPSLASGLPGKCGVSIPYPISMSTNCN 112          
BLAST of CB610695 vs. ExPASy Swiss-Prot
Match: NLTP2_TOBAC (Non-specific lipid-transfer protein 2 OS=Nicotiana tabacum PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.251e-12
Identity = 34/89 (38.20%), Postives = 49/89 (55.06%), Query Frame = 1
Query:  103 ITCEQVTIWLTPCISYGVLGGAVQPACCEGIRALNAASKTTEDRRTQCNCVKEGAARIPGLDYDRVNMLPDICRSKCPYKLTHDLDCSK 369
            ++C QV   L PC+ Y + G     +CC G++ L  A+K+  DR+T C C+K  A  I G+D  +   LP  C    PYK++   DCSK
Sbjct:   25 LSCGQVQSGLAPCLPY-LQGRGPLGSCCGGVKGLLGAAKSLSDRKTACTCLKSAANAIKGIDMGKAAGLPGACGVNIPYKISPSTDCSK 112          
The following BLAST results are available for this feature:
BLAST of CB610695 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
NLTP4_ORYSJ3.292e-1340.66Non-specific lipid-transfer protein 4 OS=Oryza sat... [more]
NLTP1_LENCU3.292e-1339.77Non-specific lipid-transfer protein 1 OS=Lens culi... [more]
NLTP2_SOLCI5.615e-1339.78Non-specific lipid-transfer protein 2 OS=Solanum c... [more]
NLTP4_LENCU9.578e-1338.64Non-specific lipid-transfer protein 4 (Fragment) O... [more]
NLTP_BETVU1.251e-1241.11Non-specific lipid-transfer protein OS=Beta vulgar... [more]
NLTP6_LENCU1.251e-1238.64Non-specific lipid-transfer protein 6 OS=Lens culi... [more]
NLTP5_LENCU1.251e-1238.64Non-specific lipid-transfer protein 5 OS=Lens culi... [more]
NLTP3_HORVU1.251e-1237.78Non-specific lipid-transfer protein 3 OS=Hordeum v... [more]
NLTP3_ARATH1.251e-1237.50Non-specific lipid-transfer protein 3 OS=Arabidops... [more]
NLTP2_TOBAC1.251e-1238.20Non-specific lipid-transfer protein 2 OS=Nicotiana... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0003_IIIaF_B09 Mature Albedo Citrus sinensis cDNA clone ALBEDO0003_IIIaF_B09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610695 ID=CB610695; Name=CB610695; organism=Citrus sinensis; type=EST; length=494bp
GGGGAATGCATAAACCATAATTACAATGGCACAGTGTCTCTTGCAACAGT
GCTATTGTTATTGTTGGCTGCCACTACGGCTCCCCTGAATGTAGCAACAG
CAATAACATGTGAGCAAGTGACAATCTGGCTGACACCATGCATCAGCTAT
GGTGTATTAGGTGGGGCTGTTCAGCCAGCTTGTTGTGAAGGCATTAGAGC
TTTGAATGCTGCTTCAAAAACCACAGAAGATAGAAGGACCCAATGTAATT
GTGTGAAGGAAGGCGCTGCTAGGATCCCTGGACTCGACTATGATCGTGTT
AATATGCTTCCTGACATTTGTCGGAGTAAATGTCCTTATAAACTTACACA
TGATCTTGATTGCTCTAAGTGCGCCCTTAATTCTTATCCTAGCTAGCCTG
TTATTGCTTGTTCTCTTATTCATTGTTTTGAATTTTAGGCCCTTTCCGAG
CCGATCATTTACCCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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