CB610695

Overview
NameCB610695
Unique NameCB610695
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length494
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB610695 vs. ExPASy Swiss-Prot
Match: NLTP2_LENCU (Non-specific lipid-transfer protein 2 OS=Lens culinaris PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.251e-12
Identity = 34/88 (38.64%), Postives = 49/88 (55.68%), Query Frame = 1
Query:  103 ITCEQVTIWLTPCISYGVLGGAVQPACCEGIRALNAASKTTEDRRTQCNCVKEGAARIPGLDYDRVNMLPDICRSKCPYKLTHDLDCS 366
            I+C  VT  L+PC++Y   G    P CC G++ L AA+ TT DR+  CNC+K  A  I  L+ +    LP  C    PYK++   +C+
Sbjct:   27 ISCGAVTSDLSPCLTYLTGGPGPSPQCCGGVKKLLAAANTTPDRQAACNCLKSAAGSITKLNTNNAAALPGKCGVNIPYKISTTTNCN 114          
BLAST of CB610695 vs. ExPASy Swiss-Prot
Match: NLTP1_PHAAU (Non-specific lipid-transfer protein 1 OS=Phaseolus aureus PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.634e-12
Identity = 32/88 (36.36%), Postives = 50/88 (56.82%), Query Frame = 1
Query:  103 ITCEQVTIWLTPCISYGVLGGAVQPACCEGIRALNAASKTTEDRRTQCNCVKEGAARIPGLDYDRVNMLPDICRSKCPYKLTHDLDCS 366
            +TC QV   L  CI +   GG V P+CC G++ +  +S+TT DRR  C+C+K  A  + G++ +    LP  C    PYK++   +C+
Sbjct:    1 MTCGQVQGNLAQCIGFLQKGGVVPPSCCTGVKNILNSSRTTADRRAVCSCLKAAAGAVRGINPNNAEALPGKCGVNIPYKISTSTNCN 88          
BLAST of CB610695 vs. ExPASy Swiss-Prot
Match: NLT43_HORVU (Non-specific lipid-transfer protein 4.3 OS=Hordeum vulgare GN=LTP4.3 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.634e-12
Identity = 35/90 (38.89%), Postives = 53/90 (58.89%), Query Frame = 1
Query:  103 ITCEQVTIWLTPCISYGVLGGAVQP-ACCEGIRALNAASKTTEDRRTQCNCVKEGAARIPGLDYDRVNMLPDICRSKCPYKLTHDLDCSK 369
            I+C QV+  L+PCISY    GA  P ACC G++ L  A+++T D++  C C+K  A    GL+  +   +P +C    PY ++  +DCSK
Sbjct:   27 ISCGQVSSALSPCISYARGNGAKPPVACCSGVKRLAGAAQSTADKQAACKCIKSAAG---GLNAGKAAGIPSMCGVSVPYAISASVDCSK 113          
BLAST of CB610695 vs. ExPASy Swiss-Prot
Match: NLT42_HORVU (Non-specific lipid-transfer protein 4.2 OS=Hordeum vulgare GN=LTP4.2 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.634e-12
Identity = 35/90 (38.89%), Postives = 53/90 (58.89%), Query Frame = 1
Query:  103 ITCEQVTIWLTPCISYGVLGGAVQP-ACCEGIRALNAASKTTEDRRTQCNCVKEGAARIPGLDYDRVNMLPDICRSKCPYKLTHDLDCSK 369
            I+C QV+  L+PCISY    GA  P ACC G++ L  A+++T D++  C C+K  A    GL+  +   +P +C    PY ++  +DCSK
Sbjct:   27 ISCGQVSSALSPCISYARGNGAKPPVACCSGVKRLAGAAQSTADKQAACKCIKSAAG---GLNAGKAAGIPSMCGVSVPYAISASVDCSK 113          
BLAST of CB610695 vs. ExPASy Swiss-Prot
Match: NLT41_HORVU (Non-specific lipid-transfer protein 4.1 OS=Hordeum vulgare GN=LTP4.1 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.634e-12
Identity = 35/90 (38.89%), Postives = 53/90 (58.89%), Query Frame = 1
Query:  103 ITCEQVTIWLTPCISYGVLGGAVQPA-CCEGIRALNAASKTTEDRRTQCNCVKEGAARIPGLDYDRVNMLPDICRSKCPYKLTHDLDCSK 369
            I+C QV+  L+PCISY    GA  PA CC G++ L  A+++T D++  C C+K  A    GL+  +   +P +C    PY ++  +DCSK
Sbjct:   27 ISCGQVSSALSPCISYARGNGAKPPAACCSGVKRLAGAAQSTADKQAACKCIKSAAG---GLNAGKAAGIPSMCGVSVPYAISASVDCSK 113          
BLAST of CB610695 vs. ExPASy Swiss-Prot
Match: NLTP_DAUCA (Non-specific lipid-transfer protein OS=Daucus carota GN=EP2 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 3.640e-12
Identity = 35/91 (38.46%), Postives = 51/91 (56.04%), Query Frame = 1
Query:  103 ITCEQVTIWLTPCISY--GVLGGAVQPACCEGIRALNAASKTTEDRRTQCNCVKEGAARIPGLDYDRVNMLPDICRSKCPYKLTHDLDCSK 369
            +TC QVT  L PC+ Y    +   V   CC  +R LN A++TT D+RT C C+K+ A  + GL+ +    LP  C    PYK++   DC++
Sbjct:   28 LTCGQVTGALAPCLGYLRSQVNVPVPLTCCNVVRGLNNAARTTLDKRTACGCLKQTANAVTGLNLNAAAGLPARCGVNIPYKISPTTDCNR 118          
BLAST of CB610695 vs. ExPASy Swiss-Prot
Match: NLTP_CICAR (Non-specific lipid-transfer protein OS=Cicer arietinum PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 3.640e-12
Identity = 34/88 (38.64%), Postives = 47/88 (53.41%), Query Frame = 1
Query:  103 ITCEQVTIWLTPCISYGVLGGAVQPACCEGIRALNAASKTTEDRRTQCNCVKEGAARIPGLDYDRVNMLPDICRSKCPYKLTHDLDCS 366
            ITC +V   L PC+ Y   G      CC G+R LN+A+ TT DR+  CNC+K  A  I  L+ +    LP  C    PYK++   +C+
Sbjct:   25 ITCGRVDTALAPCLGYLQGGPGPSAQCCGGVRNLNSAAVTTPDRQAACNCLKSAAGSISRLNANNAAALPGKCVVNIPYKISTSTNCA 112          
BLAST of CB610695 vs. ExPASy Swiss-Prot
Match: NLTPB_ARATH (Non-specific lipid-transfer protein 11 OS=Arabidopsis thaliana GN=LTP11 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.059e-11
Identity = 32/88 (36.36%), Postives = 45/88 (51.14%), Query Frame = 1
Query:  103 ITCEQVTIWLTPCISYGVLGGAVQPACCEGIRALNAASKTTEDRRTQCNCVKEGAARIPGLDYDRVNMLPDICRSKCPYKLTHDLDCS 366
            I C QV ++L  C+ Y   GG   P CC G+ +L AA+    DR+  CNC+K  A  IPG++ D    LP  C        +  +DC+
Sbjct:   29 IACPQVNMYLAQCLPYLKAGGNPSPMCCNGLNSLKAAAPEKADRQVACNCLKSVANTIPGINDDFAKQLPAKCGVNIGVPFSKTVDCN 116          
BLAST of CB610695 vs. ExPASy Swiss-Prot
Match: NLTP3_LENCU (Non-specific lipid-transfer protein 3 OS=Lens culinaris PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.383e-11
Identity = 33/88 (37.50%), Postives = 46/88 (52.27%), Query Frame = 1
Query:  103 ITCEQVTIWLTPCISYGVLGGAVQPACCEGIRALNAASKTTEDRRTQCNCVKEGAARIPGLDYDRVNMLPDICRSKCPYKLTHDLDCS 366
            ++C  VT  L PCI Y   G     +CC G++ L AA+ TT DR+  CNC+K  A  I  L+      LP  C    PYK++   +C+
Sbjct:   27 VSCGTVTGDLAPCIPYLTGGAGPTDSCCAGVKKLLAAAPTTADRQAACNCLKTAAGNINNLNPGNAAALPGKCNVNIPYKISTTTNCN 114          
BLAST of CB610695 vs. ExPASy Swiss-Prot
Match: NLTP5_VITSX (Non-specific lipid-transfer protein P5 OS=Vitis sp. PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 2.359e-11
Identity = 30/89 (33.71%), Postives = 48/89 (53.93%), Query Frame = 1
Query:  103 ITCEQVTIWLTPCISYGVLGGAVQPACCEGIRALNAASKTTEDRRTQCNCVKEGAARIPGLDYDRVNMLPDICRSKCPYKLTHDLDCSK 369
            ++C  V   L PCI+Y    G +  ACC G++ L  ++ TT+DRRT C C+   +  I G+++     LP  C    PYK++   +C +
Sbjct:    1 LSCGDVATQLAPCINYLRSAGPLPVACCNGVKNLKNSAATTQDRRTACKCLINASKSISGVNFGLAAGLPGKCGVNIPYKISPSTNCDQ 89          
The following BLAST results are available for this feature:
BLAST of CB610695 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
NLTP2_LENCU1.251e-1238.64Non-specific lipid-transfer protein 2 OS=Lens culi... [more]
NLTP1_PHAAU1.634e-1236.36Non-specific lipid-transfer protein 1 OS=Phaseolus... [more]
NLT43_HORVU1.634e-1238.89Non-specific lipid-transfer protein 4.3 OS=Hordeum... [more]
NLT42_HORVU1.634e-1238.89Non-specific lipid-transfer protein 4.2 OS=Hordeum... [more]
NLT41_HORVU1.634e-1238.89Non-specific lipid-transfer protein 4.1 OS=Hordeum... [more]
NLTP_DAUCA3.640e-1238.46Non-specific lipid-transfer protein OS=Daucus caro... [more]
NLTP_CICAR3.640e-1238.64Non-specific lipid-transfer protein OS=Cicer ariet... [more]
NLTPB_ARATH1.059e-1136.36Non-specific lipid-transfer protein 11 OS=Arabidop... [more]
NLTP3_LENCU1.383e-1137.50Non-specific lipid-transfer protein 3 OS=Lens culi... [more]
NLTP5_VITSX2.359e-1133.71Non-specific lipid-transfer protein P5 OS=Vitis sp... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0003_IIIaF_B09 Mature Albedo Citrus sinensis cDNA clone ALBEDO0003_IIIaF_B09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610695 ID=CB610695; Name=CB610695; organism=Citrus sinensis; type=EST; length=494bp
GGGGAATGCATAAACCATAATTACAATGGCACAGTGTCTCTTGCAACAGT
GCTATTGTTATTGTTGGCTGCCACTACGGCTCCCCTGAATGTAGCAACAG
CAATAACATGTGAGCAAGTGACAATCTGGCTGACACCATGCATCAGCTAT
GGTGTATTAGGTGGGGCTGTTCAGCCAGCTTGTTGTGAAGGCATTAGAGC
TTTGAATGCTGCTTCAAAAACCACAGAAGATAGAAGGACCCAATGTAATT
GTGTGAAGGAAGGCGCTGCTAGGATCCCTGGACTCGACTATGATCGTGTT
AATATGCTTCCTGACATTTGTCGGAGTAAATGTCCTTATAAACTTACACA
TGATCTTGATTGCTCTAAGTGCGCCCTTAATTCTTATCCTAGCTAGCCTG
TTATTGCTTGTTCTCTTATTCATTGTTTTGAATTTTAGGCCCTTTCCGAG
CCGATCATTTACCCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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