CB610696

Overview
NameCB610696
Unique NameCB610696
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length504
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB610696 vs. ExPASy Swiss-Prot
Match: HS166_ORYSJ (16.6 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP16.6 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 4.509e-29
Identity = 69/136 (50.74%), Postives = 85/136 (62.50%), Query Frame = 3
Query:  105 RRTNVFDPVSLDVWDPFDGFLSSALTYAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEE--KND-KWHRVERSSGKFLRRFRLPDNGKVEQVKATMENGVLTIADPK 503
            R  NV DP+S+D W   D F +       S A       N R+DWKETP AHVF ADLPG+R          G +L ISGER++E++   KND +WH VERSSGKF RRFRLP   +V+QV A+M+NGVLT+  PK
Sbjct:    5 RSGNVLDPMSVDFWADADPFGA-----VRSLAERCPVLTNVRVDWKETPTAHVFTADLPGVRKDQAKVEVEDGGVLVISGERAREEDVDGKNDERWHHVERSSGKFQRRFRLPRGARVDQVSASMDNGVLTVTVPK 135          
BLAST of CB610696 vs. ExPASy Swiss-Prot
Match: HS189_ORYSJ (18.9 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP18.9 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 2.735e-26
Identity = 61/137 (44.53%), Postives = 85/137 (62.04%), Query Frame = 3
Query:   99 GGRRTNVFDPVSLDVWDPF-DGFLSSALTYAPSSARETSQF-ANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNGKVEQVKATMENGVLTIADPK 503
            GG      +PVS+D+ +PF D    +A   APS+A   +   + A +DWKET  AHVF AD+PG+R           ++L+ISG+R++  EEK ++WHRVERSS +F+R  RLP N   + V A ++NGVLTI  PK
Sbjct:   26 GGGGGGEIEPVSVDIMEPFMDAISLTAFAAAPSAAAAAAGVPSTASMDWKETAAAHVFMADMPGVRREEVRVEVEEEKVLRISGQRARAAEEKGERWHRVERSSERFVRTVRLPPNANTDGVHAALDNGVLTITIPK 162          
BLAST of CB610696 vs. ExPASy Swiss-Prot
Match: HSP41_PEA (22.7 kDa class IV heat shock protein OS=Pisum sativum GN=HSP22.7 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 6.737e-25
Identity = 55/123 (44.72%), Postives = 76/123 (61.79%), Query Frame = 3
Query:  138 DVW-----DPFDGFLSSALTYAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNGKVEQVKATMENGVLTI 491
            D+W     DPF   +   + Y       +   ++AR+DWKETP+ HV   D+PGL+           R+L++SGER KE+++K D WHRVERS GKF R+F+LP N  ++ VKA MENGVLT+
Sbjct:   43 DLWSDRFPDPFR--VLEQIPYGVEKHEPSITLSHARVDWKETPEGHVIMVDVPGLKKDDIKIEVEENRVLRVSGERKKEEDKKGDHWHRVERSYGKFWRQFKLPQNVDLDSVKAKMENGVLTL 163          
BLAST of CB610696 vs. ExPASy Swiss-Prot
Match: HSP41_SOYBN (22.0 kDa class IV heat shock protein OS=Glycine max GN=HSP22.0 PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 1.501e-24
Identity = 57/129 (44.19%), Postives = 79/129 (61.24%), Query Frame = 3
Query:  126 PVSL--DVW-----DPFDGFLSSALTYAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNGKVEQVKATMENGVLTI 491
            P++L  D+W     DPF   +   + +       +   + AR+DWKETP+ HV   D+PGL+           R+L++SGER KE+E+K D WHRVERS GKF R+FRLP N  ++ VKA +ENGVLT+
Sbjct:   29 PITLLADLWSDRFPDPFR--VLEHIPFGVDKDEASMAMSPARVDWKETPEGHVIMLDVPGLKREEIKVEVEENRVLRVSGERKKEEEKKGDHWHRVERSYGKFWRQFRLPQNVDLDSVKAKLENGVLTL 155          
BLAST of CB610696 vs. ExPASy Swiss-Prot
Match: HSP22_ARATH (22.0 kDa heat shock protein OS=Arabidopsis thaliana GN=HSP22.0 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 4.828e-23
Identity = 51/98 (52.04%), Postives = 68/98 (69.39%), Query Frame = 3
Query:  201 RETS-QFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNGKVEQVKATMENGVLTI 491
            R+TS   + AR+DWKET + H    D+PGL+            +L++SGER +E+E+K D+WHRVERS GKF R+F+LPDN  +E VKA +ENGVLTI
Sbjct:   62 RDTSVALSPARVDWKETAEGHEIMLDIPGLKKDEVKIEVEENGVLRVSGERKREEEKKGDQWHRVERSYGKFWRQFKLPDNVDMESVKAKLENGVLTI 159          
BLAST of CB610696 vs. ExPASy Swiss-Prot
Match: HS17B_ORYSJ (17.9 kDa heat shock protein 2 OS=Oryza sativa subsp. japonica GN=HSP17.9B PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 3.460e-21
Identity = 54/130 (41.54%), Postives = 80/130 (61.54%), Query Frame = 3
Query:  117 VFDPVSLDVWDPFDGFLSSALTYAPSSARETSQFANARIDWKETPQAHVFKADLP-GLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNGKVEQVKATMENGVLTIADPK 503
            +FD ++ D W+PF  F ++    A   A +TS FAN  I+ +ET +A+VF+ADLP G++          G +L I+GERS  +EEK  + H +ERS   F  RF LPD+  V+ V+A+M+ G+LT+  PK
Sbjct:    6 LFDTLAFDAWNPFSIFGTTVAADA-WLASDTSAFANTYIESRETAEAYVFRADLPAGVKKEEVRVEVDEGNVLVITGERSVRREEKGQRSHHIERSCATFFGRFHLPDDAVVDLVRASMDGGMLTVTVPK 134          
BLAST of CB610696 vs. ExPASy Swiss-Prot
Match: HSP12_SOYBN (Class I heat shock protein (Fragment) OS=Glycine max GN=HSP6834-A PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.315e-20
Identity = 46/59 (77.97%), Postives = 53/59 (89.83%), Query Frame = 3
Query:  327 ILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNGKVEQVKATMENGVLTIADPK 503
            ILQISGER+ E+E+KND WHRVERSSGKF+R FRLPDN KV+QVKA+MENGVLT+  PK
Sbjct:    1 ILQISGERNVEKEDKNDTWHRVERSSGKFMRSFRLPDNAKVDQVKASMENGVLTVTVPK 59          
BLAST of CB610696 vs. ExPASy Swiss-Prot
Match: HS219_ORYSJ (21.9 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP21.9 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 1.607e-18
Identity = 49/114 (42.98%), Postives = 72/114 (63.16%), Query Frame = 3
Query:  186 APSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXG-RILQISGER-----SKEQEEKND--KWHRVERSSGKFLRRFRLPDNGKVEQVKATMENGVLTIADPK 503
            A ++A E +  A AR DWKETP+AHV   D+PG+R            R+L++SGER     ++E+E + D  +WHR ER++G+F RRFR+P    V +V A +++GVLT+  PK
Sbjct:   59 AAAAAGEPAAVALARCDWKETPEAHVVTVDVPGVRRGDVRVEVDEASRVLRVSGERRRAGAAEEEEGERDGVRWHRAERAAGRFWRRFRMPPGADVGRVAARLDDGVLTVTVPK 172          
BLAST of CB610696 vs. ExPASy Swiss-Prot
Match: HS232_ORYSJ (23.2 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP23.2 PE=2 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 2.099e-18
Identity = 59/158 (37.34%), Postives = 87/158 (55.06%), Query Frame = 3
Query:   42 LSI*LASQFAIMSLIPSIFGG--RRTNVFDPVSLDVWDPFDGFLSSALTYAPSS--ARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQ--EEKN--DKWHRVERSSGKFLRRFRLPDNGKVEQVKATMENGVLTI 491
            +++ LAS  A  +L+P   GG  R   V +   L   DPF       L + P      + +  + AR+DW+ET  AH    D+PG+R           R+L+ISGER +E+  E+K   D WHR ERS G+F R+ RLPDN  ++ + A+++NGVLT+
Sbjct:   16 IAVVLASTAADGALLPWFGGGGARDEAVPELGLLAAADPF-----RILEHVPFGFDRDDVAMLSMARVDWRETGDAHEVVVDVPGMRKEDLRVEVEDNRVLRISGERRREETTEQKGGGDHWHREERSYGRFWRQLRLPDNADLDSIAASLDNGVLTV 168          
BLAST of CB610696 vs. ExPASy Swiss-Prot
Match: HS157_ARATH (15.7 kDa heat shock protein, peroxisomal OS=Arabidopsis thaliana GN=HSP15.7 PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.965e-16
Identity = 43/100 (43.00%), Postives = 60/100 (60.00%), Query Frame = 3
Query:  219 ANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSS-----GKFLRRFRLPDNGKVEQVKATMENGVLTIADPK 503
            + A IDW E+  +H+FK ++PG            G +L I GE  KE++++N  WH  ER +      +FLRR  LP+N KV+QVKA +ENGVLT+  PK
Sbjct:   20 STALIDWMESNNSHIFKINVPGYNKEDIKVQIEEGNVLSIRGEGIKEEKKENLVWHVAEREAFSGGGSEFLRRIELPENVKVDQVKAYVENGVLTVVVPK 119          
The following BLAST results are available for this feature:
BLAST of CB610696 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
HS166_ORYSJ4.509e-2950.7416.6 kDa heat shock protein OS=Oryza sativa subsp.... [more]
HS189_ORYSJ2.735e-2644.5318.9 kDa heat shock protein OS=Oryza sativa subsp.... [more]
HSP41_PEA6.737e-2544.7222.7 kDa class IV heat shock protein OS=Pisum sati... [more]
HSP41_SOYBN1.501e-2444.1922.0 kDa class IV heat shock protein OS=Glycine ma... [more]
HSP22_ARATH4.828e-2352.0422.0 kDa heat shock protein OS=Arabidopsis thalian... [more]
HS17B_ORYSJ3.460e-2141.5417.9 kDa heat shock protein 2 OS=Oryza sativa subs... [more]
HSP12_SOYBN1.315e-2077.97Class I heat shock protein (Fragment) OS=Glycine m... [more]
HS219_ORYSJ1.607e-1842.9821.9 kDa heat shock protein OS=Oryza sativa subsp.... [more]
HS232_ORYSJ2.099e-1837.3423.2 kDa heat shock protein OS=Oryza sativa subsp.... [more]
HS157_ARATH1.965e-1643.0015.7 kDa heat shock protein, peroxisomal OS=Arabid... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0003_IIIaF_B11 Mature Albedo Citrus sinensis cDNA clone ALBEDO0003_IIIaF_B11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610696 ID=CB610696; Name=CB610696; organism=Citrus sinensis; type=EST; length=504bp
GGGGATCTTCAAATTGATTGATCAAAGCATTTCCGAAGTTGTTGAGCATT
TAATTAGCGTCCCAGTTTGCCATAATGTCACTCATTCCAAGCATCTTCGG
TGGCCGAAGAACCAACGTGTTCGATCCAGTTTCATTAGATGTATGGGATC
CTTTCGACGGGTTCTTGTCCTCTGCCCTTACCTACGCGCCGTCTTCGGCT
AGGGAAACATCCCAATTCGCCAATGCAAGAATTGACTGGAAAGAGACTCC
TCAGGCTCACGTATTCAAAGCTGATCTTCCAGGGCTGAGGAAAGAAGAAG
TAAAAGTTGAGGTTGTAGAGGGCAGGATTCTGCAGATAAGCGGAGAGAGG
AGCAAGGAGCAGGAAGAGAAGAATGACAAGTGGCATCGCGTCGAGAGGAG
CAGTGGCAAGTTCCTGAGGAGGTTCAGGTTGCCCGACAATGGTAAGGTGG
AACAGGTTAAGGCCACCATGGAGAATGGTGTGCTCACAATCGCCGATCCT
AAAC
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